1HMMER3/e [3.0 | March 2010] 2NAME M1 3LENG 1 4ALPH amino 5RF no 6CONS yes 7CS no 8MAP yes 9DATE Thu Jun 16 11:49:23 2011 10NSEQ 2 11EFFN 2.000000 12CKSUM 0 13STATS LOCAL MSV -4.9046 1.46065 14STATS LOCAL VITERBI -5.1999 1.46065 15STATS LOCAL FORWARD -0.0517 1.46065 16HMM A C D E F G H I K L M N P Q R S T V W Y 17 m->m m->i m->d i->m i->i d->m d->d 18 COMPO 0.35624 4.75100 4.29053 4.19828 4.88306 3.48560 5.11004 4.21322 4.22519 4.00099 5.04236 4.13232 4.23379 4.52899 4.38323 3.09073 3.42594 3.72730 6.17838 5.12044 19 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 20 0.01467 4.62483 5.34718 0.61958 0.77255 0.00000 * 21 1 0.32372 4.76536 4.42980 4.32857 5.00499 3.55951 5.22620 4.27004 4.37081 4.10495 5.08789 4.22499 4.36948 4.63911 4.51684 3.12947 3.46009 3.76842 6.33337 5.25783 1 A - - 22 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 23 0.00990 4.62006 * 0.61958 0.77255 0.00000 * 24// 25