| Name | Date | Size | #Lines | LOC | ||
|---|---|---|---|---|---|---|
| .. | 03-May-2022 | - | ||||
| gsa/ | H | 03-May-2022 | - | 646 | 343 | |
| 1kg.sh | H A D | 03-May-2022 | 862 | 33 | 17 | |
| annotate_demo.sh | H A D | 03-May-2022 | 3 KiB | 101 | 13 | |
| annotate_demo_GATK.sh | H A D | 03-May-2022 | 1.7 KiB | 57 | 31 | |
| bedEffOnePerLine.pl | H A D | 03-May-2022 | 1.1 KiB | 43 | 18 | |
| buildDbNcbi.sh | H A D | 03-May-2022 | 1 KiB | 52 | 13 | |
| cgShore.pl | H A D | 03-May-2022 | 1.2 KiB | 40 | 17 | |
| cgShore.sh | H A D | 03-May-2022 | 254 | 9 | 3 | |
| countColumns.py | H A D | 03-May-2022 | 145 | 9 | 5 | |
| db.pl | H A D | 03-May-2022 | 756 | 30 | 12 | |
| extractSequences.pl | H A D | 03-May-2022 | 821 | 38 | 18 | |
| fasta2tab.pl | H A D | 03-May-2022 | 814 | 33 | 13 | |
| fastaSample.pl | H A D | 03-May-2022 | 803 | 42 | 26 | |
| fastaSplit.pl | H A D | 03-May-2022 | 1.1 KiB | 43 | 21 | |
| fastqSplit.pl | H A D | 03-May-2022 | 1.9 KiB | 63 | 30 | |
| filterBy.py | H A D | 03-May-2022 | 991 | 38 | 16 | |
| gffRemovePhase.pl | H A D | 03-May-2022 | 233 | 17 | 14 | |
| isutf8.py | H A D | 03-May-2022 | 570 | 30 | 20 | |
| join.pl | H A D | 03-May-2022 | 1.4 KiB | 58 | 32 | |
| joinSnpEff.pl | H A D | 03-May-2022 | 3.4 KiB | 126 | 78 | |
| make_and_commit_docs.sh | H A D | 03-May-2022 | 210 | 14 | 8 | |
| make_dbNSFP.sh | H A D | 03-May-2022 | 1.2 KiB | 53 | 40 | |
| nextProt_filter.pl | H A D | 03-May-2022 | 2.1 KiB | 90 | 47 | |
| ped2vcf.py | H A D | 03-May-2022 | 2 KiB | 94 | 57 | |
| plot.pl | H A D | 03-May-2022 | 1.7 KiB | 74 | 33 | |
| plotHistogram.pl | H A D | 03-May-2022 | 2.2 KiB | 89 | 44 | |
| plotLabel.pl | H A D | 03-May-2022 | 2.1 KiB | 83 | 42 | |
| plotMA.pl | H A D | 03-May-2022 | 1.7 KiB | 72 | 33 | |
| plotQQ.pl | H A D | 03-May-2022 | 2.2 KiB | 88 | 46 | |
| plotQQsubsample.pl | H A D | 03-May-2022 | 3.2 KiB | 110 | 64 | |
| plotSmoothScatter.pl | H A D | 03-May-2022 | 2.1 KiB | 83 | 41 | |
| plotXY.pl | H A D | 03-May-2022 | 1.9 KiB | 80 | 39 | |
| queue.pl | H A D | 03-May-2022 | 4 KiB | 128 | 74 | |
| sam2fastq.pl | H A D | 03-May-2022 | 348 | 15 | 5 | |
| sample.pl | H A D | 03-May-2022 | 267 | 13 | 9 | |
| snpEff | H A D | 03-May-2022 | 1.3 KiB | 53 | 33 | |
| snpSift | H A D | 03-May-2022 | 1.1 KiB | 47 | 27 | |
| snpSift_filter_sample_to_number.pl | H A D | 03-May-2022 | 1.4 KiB | 53 | 22 | |
| sortLine.py | H A D | 03-May-2022 | 197 | 11 | 7 | |
| splitChr.pl | H A D | 03-May-2022 | 922 | 39 | 19 | |
| statsNum.pl | H A D | 03-May-2022 | 411 | 24 | 18 | |
| swapCols.pl | H A D | 03-May-2022 | 750 | 34 | 21 | |
| transpose.pl | H A D | 03-May-2022 | 509 | 27 | 18 | |
| txt2fa.pl | H A D | 03-May-2022 | 81 | 4 | 1 | |
| txt2vcf.py | H A D | 03-May-2022 | 2.2 KiB | 97 | 52 | |
| uniqCount.pl | H A D | 03-May-2022 | 204 | 14 | 10 | |
| uniqCut.pl | H A D | 03-May-2022 | 2.3 KiB | 95 | 54 | |
| vcfAnnFirst.py | H A D | 03-May-2022 | 983 | 49 | 26 | |
| vcfBareBones.pl | H A D | 03-May-2022 | 723 | 42 | 27 | |
| vcfEffHighest.ORI.py | H A D | 03-May-2022 | 1.9 KiB | 65 | 35 | |
| vcfEffOnePerLine.pl | H A D | 03-May-2022 | 1.6 KiB | 68 | 38 | |
| vcfFilterSamples.pl | H A D | 03-May-2022 | 2.3 KiB | 96 | 50 | |
| vcfInfoOnePerLine.pl | H A D | 03-May-2022 | 627 | 31 | 21 | |
| vcfOnlyAlts.pl | H A D | 03-May-2022 | 247 | 15 | 9 | |
| vcfReduceGenotypes.pl | H A D | 03-May-2022 | 263 | 18 | 12 | |
| vcfRefCorrect.py | H A D | 03-May-2022 | 1.9 KiB | 77 | 45 | |
| wigSplit.pl | H A D | 03-May-2022 | 663 | 38 | 16 |