| Name | Date | Size | #Lines | LOC | ||
|---|---|---|---|---|---|---|
| .. | 15-Mar-2021 | - | ||||
| .gitignore | H A D | 15-Mar-2021 | 55 | 4 | 3 | |
| Makefile | H A D | 15-Mar-2021 | 5 KiB | 212 | 114 | |
| al_iterator.c | H A D | 15-Mar-2021 | 17.6 KiB | 566 | 431 | |
| align-access.c | H A D | 15-Mar-2021 | 24.2 KiB | 833 | 675 | |
| align_mgr.c | H A D | 15-Mar-2021 | 2.9 KiB | 109 | 68 | |
| bam-priv.h | H A D | 15-Mar-2021 | 1.6 KiB | 49 | 13 | |
| bam.c | H A D | 15-Mar-2021 | 153.8 KiB | 5,071 | 4,262 | |
| debug.h | H A D | 15-Mar-2021 | 3.5 KiB | 78 | 39 | |
| dna-reverse-cmpl.c | H A D | 15-Mar-2021 | 2.8 KiB | 81 | 51 | |
| pl_iterator.c | H A D | 15-Mar-2021 | 20.6 KiB | 690 | 529 | |
| quality-quantizer.c | H A D | 15-Mar-2021 | 3.1 KiB | 110 | 72 | |
| reader-cmn.c | H A D | 15-Mar-2021 | 9 KiB | 318 | 224 | |
| reader-cmn.h | H A D | 15-Mar-2021 | 2.9 KiB | 82 | 42 | |
| reader-refseq.c | H A D | 15-Mar-2021 | 9 KiB | 280 | 226 | |
| reader-wgs.c | H A D | 15-Mar-2021 | 4.9 KiB | 170 | 121 | |
| reader-wgs.h | H A D | 15-Mar-2021 | 2.3 KiB | 59 | 20 | |
| ref_iterator.c | H A D | 15-Mar-2021 | 26.2 KiB | 864 | 715 | |
| reference-cmn.c | H A D | 15-Mar-2021 | 1.7 KiB | 44 | 16 | |
| reference-cmn.h | H A D | 15-Mar-2021 | 1.6 KiB | 39 | 5 | |
| reference.c | H A D | 15-Mar-2021 | 63.4 KiB | 1,944 | 1,569 | |
| refseq-mgr-priv.h | H A D | 15-Mar-2021 | 1.6 KiB | 36 | 6 | |
| refseq-mgr.c | H A D | 15-Mar-2021 | 41.4 KiB | 1,368 | 1,155 | |
| samextract-bam.cpp | H A D | 15-Mar-2021 | 36.7 KiB | 1,112 | 938 | |
| samextract-grammar.c | H A D | 15-Mar-2021 | 60.8 KiB | 2,161 | 1,448 | |
| samextract-grammar.y | H A D | 15-Mar-2021 | 11 KiB | 460 | 370 | |
| samextract-lex.c | H A D | 15-Mar-2021 | 707.4 KiB | 13,004 | 10,915 | |
| samextract-lex.l | H A D | 15-Mar-2021 | 10.8 KiB | 391 | 300 | |
| samextract-lib.cpp | H A D | 15-Mar-2021 | 22.6 KiB | 838 | 667 | |
| samextract-pool.c | H A D | 15-Mar-2021 | 3.5 KiB | 136 | 83 | |
| samextract-pool.h | H A D | 15-Mar-2021 | 1.7 KiB | 50 | 19 | |
| samextract-tokens.h | H A D | 15-Mar-2021 | 3.3 KiB | 139 | 91 | |
| samextract.h | H A D | 15-Mar-2021 | 4 KiB | 114 | 77 | |
| unsupported_pileup_estimator.c | H A D | 15-Mar-2021 | 25.8 KiB | 732 | 608 | |
| writer-alignment.c | H A D | 15-Mar-2021 | 20.6 KiB | 441 | 378 | |
| writer-cmn.c | H A D | 15-Mar-2021 | 22 KiB | 591 | 514 | |
| writer-priv.h | H A D | 15-Mar-2021 | 5.6 KiB | 152 | 78 | |
| writer-ref.c | H A D | 15-Mar-2021 | 21.2 KiB | 482 | 414 | |
| writer-ref.h | H A D | 15-Mar-2021 | 4.3 KiB | 107 | 59 | |
| writer-reference.c | H A D | 15-Mar-2021 | 110 KiB | 3,224 | 2,706 | |
| writer-refseq.c | H A D | 15-Mar-2021 | 7.2 KiB | 180 | 139 | |
| writer-sequence.c | H A D | 15-Mar-2021 | 34.9 KiB | 942 | 820 |