1# Generated by roxygen2: do not edit by hand 2 3S3method(format,bioc_git2r_remote) 4S3method(format,bioc_xgit_remote) 5S3method(format,bitbucket_remote) 6S3method(format,cran_remote) 7S3method(format,git2r_remote) 8S3method(format,github_remote) 9S3method(format,gitlab_remote) 10S3method(format,local_remote) 11S3method(format,remotes) 12S3method(format,url_remote) 13S3method(format,xgit_remote) 14S3method(github_resolve_ref,"NULL") 15S3method(github_resolve_ref,default) 16S3method(github_resolve_ref,github_pull) 17S3method(github_resolve_ref,github_release) 18S3method(print,package_deps) 19S3method(remote_download,bioc_git2r_remote) 20S3method(remote_download,bioc_xgit_remote) 21S3method(remote_download,bitbucket_remote) 22S3method(remote_download,git2r_remote) 23S3method(remote_download,github_remote) 24S3method(remote_download,gitlab_remote) 25S3method(remote_download,local_remote) 26S3method(remote_download,svn_remote) 27S3method(remote_download,url_remote) 28S3method(remote_download,xgit_remote) 29S3method(remote_metadata,bioc_git2r_remote) 30S3method(remote_metadata,bioc_xgit_remote) 31S3method(remote_metadata,bitbucket_remote) 32S3method(remote_metadata,git2r_remote) 33S3method(remote_metadata,github_remote) 34S3method(remote_metadata,gitlab_remote) 35S3method(remote_metadata,local_remote) 36S3method(remote_metadata,svn_remote) 37S3method(remote_metadata,url_remote) 38S3method(remote_metadata,xgit_remote) 39S3method(remote_package_name,bioc_git2r_remote) 40S3method(remote_package_name,bioc_xgit_remote) 41S3method(remote_package_name,bitbucket_remote) 42S3method(remote_package_name,cran_remote) 43S3method(remote_package_name,git2r_remote) 44S3method(remote_package_name,github_remote) 45S3method(remote_package_name,gitlab_remote) 46S3method(remote_package_name,local_remote) 47S3method(remote_package_name,svn_remote) 48S3method(remote_package_name,url_remote) 49S3method(remote_package_name,xgit_remote) 50S3method(remote_sha,bioc_git2r_remote) 51S3method(remote_sha,bitbucket_remote) 52S3method(remote_sha,cran_remote) 53S3method(remote_sha,git2r_remote) 54S3method(remote_sha,github_remote) 55S3method(remote_sha,gitlab_remote) 56S3method(remote_sha,local_remote) 57S3method(remote_sha,svn_remote) 58S3method(remote_sha,url_remote) 59S3method(remote_sha,xgit_remote) 60S3method(update,package_deps) 61export(add_metadata) 62export(available_packages) 63export(available_packages_reset) 64export(available_packages_set) 65export(bioc_install_repos) 66export(bioc_version) 67export(dev_package_deps) 68export(download_version) 69export(git_credentials) 70export(github_pull) 71export(github_release) 72export(github_remote) 73export(gitlab_pat) 74export(install_bioc) 75export(install_bitbucket) 76export(install_cran) 77export(install_deps) 78export(install_dev) 79export(install_git) 80export(install_github) 81export(install_gitlab) 82export(install_local) 83export(install_remote) 84export(install_svn) 85export(install_url) 86export(install_version) 87export(local_package_deps) 88export(package_deps) 89export(parse_github_repo_spec) 90export(parse_github_url) 91export(parse_repo_spec) 92export(remote_download) 93export(remote_metadata) 94export(remote_package_name) 95export(remote_sha) 96export(standardise_dep) 97export(system_requirements) 98export(update_packages) 99importFrom(stats,update) 100importFrom(tools,file_ext) 101importFrom(utils,available.packages) 102importFrom(utils,compareVersion) 103importFrom(utils,contrib.url) 104importFrom(utils,install.packages) 105importFrom(utils,read.delim) 106