1------------------------------------------------------------------------ 2r4462 | mhall | 2008-07-17 09:37:03 +1200 (Thu, 17 Jul 2008) | 1 line 3Changed paths: 4 M /trunk/weka/classifiers/functions/Logistic.java 5 6 7------------------------------------------------------------------------ 8r4463 | fracpete | 2008-07-19 20:40:35 +1200 (Sat, 19 Jul 2008) | 2 lines 9Changed paths: 10 M /trunk/weka/filters/unsupervised/attribute/ReplaceMissingValues.java 11 12enabled filter to deal with nominal attributes that have no labels at all (can happen if data is loaded from databases, a NULL column) 13 14------------------------------------------------------------------------ 15r4466 | mhall | 2008-07-29 10:29:12 +1200 (Tue, 29 Jul 2008) | 2 lines 16Changed paths: 17 M /trunk/weka/core/converters/ArffLoader.java 18 M /trunk/weka/core/converters/C45Loader.java 19 M /trunk/weka/core/converters/CSVLoader.java 20 M /trunk/weka/core/converters/LibSVMLoader.java 21 M /trunk/weka/core/converters/SerializedInstancesLoader.java 22 M /trunk/weka/core/converters/XRFFLoader.java 23 24Now closes input streams and free resources. 25 26------------------------------------------------------------------------ 27r4468 | mhall | 2008-07-30 09:21:27 +1200 (Wed, 30 Jul 2008) | 2 lines 28Changed paths: 29 M /trunk/weka/classifiers/bayes/DMNBtext.java 30 31javadoc fix 32 33------------------------------------------------------------------------ 34r4469 | mhall | 2008-07-30 10:41:11 +1200 (Wed, 30 Jul 2008) | 2 lines 35Changed paths: 36 M /branches/book2ndEd-branch/weka/filters/unsupervised/attribute/RemoveUseless.java 37 M /trunk/weka/filters/unsupervised/attribute/RemoveUseless.java 38 39Changed the variance percentage computation for a given attribute to be equal to # distinct/(total # inst - # missing) 40 41------------------------------------------------------------------------ 42r4470 | mhall | 2008-07-30 10:41:12 +1200 (Wed, 30 Jul 2008) | 2 lines 43Changed paths: 44 M /trunk/weka/filters/unsupervised/attribute/RemoveUseless.java 45 46Moved the cast to double outside the brackets in the denominator for computing variancePercent 47 48------------------------------------------------------------------------ 49r4471 | mhall | 2008-08-01 11:48:33 +1200 (Fri, 01 Aug 2008) | 2 lines 50Changed paths: 51 M /trunk/weka/gui/beans/AttributeSummarizer.java 52 53Now sets the coloring index to be equal to the class attribute's index (if set). 54 55------------------------------------------------------------------------ 56r4473 | mhall | 2008-08-01 12:02:31 +1200 (Fri, 01 Aug 2008) | 2 lines 57Changed paths: 58 M /trunk/weka/filters/unsupervised/instance/RemovePercentage.java 59 60Now uses a double rather than an int for the percentage 61 62------------------------------------------------------------------------ 63r4474 | mhall | 2008-08-02 15:05:10 +1200 (Sat, 02 Aug 2008) | 2 lines 64Changed paths: 65 M /trunk/weka/build.xml 66 67Added RevisionHandler.class to the list of classes packaged in the remoteEngine.jar file 68 69------------------------------------------------------------------------ 70r4476 | fracpete | 2008-08-06 11:16:18 +1200 (Wed, 06 Aug 2008) | 1 line 71Changed paths: 72 M /trunk/weka/classifiers/bayes/net/GUI.java 73 M /trunk/weka/classifiers/trees/UserClassifier.java 74 M /trunk/weka/gui/GenericArrayEditor.java 75 M /trunk/weka/gui/GenericObjectEditor.java 76 M /trunk/weka/gui/PropertyDialog.java 77 M /trunk/weka/gui/PropertyPanel.java 78 M /trunk/weka/gui/experiment/AlgorithmListPanel.java 79 M /trunk/weka/gui/explorer/ClassifierPanel.java 80 M /trunk/weka/gui/explorer/PreprocessPanel.java 81 82 83------------------------------------------------------------------------ 84r4477 | fracpete | 2008-08-11 10:43:06 +1200 (Mon, 11 Aug 2008) | 1 line 85Changed paths: 86 M /trunk/weka/gui/PropertySheetPanel.java 87 88 89------------------------------------------------------------------------ 90r4478 | mhall | 2008-08-11 11:39:43 +1200 (Mon, 11 Aug 2008) | 1 line 91Changed paths: 92 M /trunk/weka/experiment/RemoteEngine.java 93 94 95------------------------------------------------------------------------ 96r4479 | mhall | 2008-08-11 11:44:58 +1200 (Mon, 11 Aug 2008) | 2 lines 97Changed paths: 98 M /trunk/weka/build.xml 99 100Now includes weka.core.Utils in remoteEngine.jar 101 102------------------------------------------------------------------------ 103r4481 | fracpete | 2008-08-12 09:32:32 +1200 (Tue, 12 Aug 2008) | 1 line 104Changed paths: 105 M /trunk/weka/gui/SimpleCLIPanel.java 106 107 108------------------------------------------------------------------------ 109r4483 | mhall | 2008-08-12 09:52:20 +1200 (Tue, 12 Aug 2008) | 2 lines 110Changed paths: 111 M /trunk/weka/classifiers/functions/SMO.java 112 113Fixed bug in attributeNames(). It wasn't using the BinarySMO's sparse indices vector to index attribute names. 114 115------------------------------------------------------------------------ 116r4484 | fracpete | 2008-08-13 13:23:03 +1200 (Wed, 13 Aug 2008) | 1 line 117Changed paths: 118 M /trunk/weka/core/TechnicalInformation.java 119 120 121------------------------------------------------------------------------ 122r4485 | fracpete | 2008-08-17 13:33:14 +1200 (Sun, 17 Aug 2008) | 1 line 123Changed paths: 124 M /trunk/weka/core/ClassDiscovery.java 125 126 127------------------------------------------------------------------------ 128r4486 | fracpete | 2008-08-17 13:37:29 +1200 (Sun, 17 Aug 2008) | 1 line 129Changed paths: 130 M /trunk/weka/core/ClassDiscovery.java 131 132 133------------------------------------------------------------------------ 134r4487 | fracpete | 2008-08-17 14:14:46 +1200 (Sun, 17 Aug 2008) | 1 line 135Changed paths: 136 M /trunk/weka/experiment/DatabaseUtils.java 137 138 139------------------------------------------------------------------------ 140r4490 | mhall | 2008-08-19 11:04:57 +1200 (Tue, 19 Aug 2008) | 1 line 141Changed paths: 142 M /trunk/weka/gui/visualize/Plot2D.java 143 144 145------------------------------------------------------------------------ 146r4491 | mhall | 2008-08-19 13:50:51 +1200 (Tue, 19 Aug 2008) | 1 line 147Changed paths: 148 M /trunk/weka/classifiers/Evaluation.java 149 150 151------------------------------------------------------------------------ 152r4492 | fracpete | 2008-08-20 13:34:18 +1200 (Wed, 20 Aug 2008) | 2 lines 153Changed paths: 154 M /trunk/weka/associations/Tertius.java 155 156parts string ("-p") is only returned if set (currently disabled anyway) 157 158------------------------------------------------------------------------ 159r4493 | fracpete | 2008-08-20 14:17:53 +1200 (Wed, 20 Aug 2008) | 1 line 160Changed paths: 161 M /trunk/weka/datagenerators/DataGenerator.java 162 163 164------------------------------------------------------------------------ 165r4494 | mhall | 2008-08-21 15:48:34 +1200 (Thu, 21 Aug 2008) | 1 line 166Changed paths: 167 M /trunk/weka/clusterers/SimpleKMeans.java 168 169 170------------------------------------------------------------------------ 171r4496 | fracpete | 2008-08-21 17:59:16 +1200 (Thu, 21 Aug 2008) | 1 line 172Changed paths: 173 M /trunk/weka/gui/explorer/PreprocessPanel.java 174 175 176------------------------------------------------------------------------ 177r4497 | mhall | 2008-08-22 12:01:10 +1200 (Fri, 22 Aug 2008) | 1 line 178Changed paths: 179 M /trunk/weka/gui/AttributeSummaryPanel.java 180 181 182------------------------------------------------------------------------ 183r4498 | mhall | 2008-08-22 12:06:31 +1200 (Fri, 22 Aug 2008) | 1 line 184Changed paths: 185 M /trunk/weka/filters/unsupervised/attribute/StringToNominal.java 186 187 188------------------------------------------------------------------------ 189r4499 | fracpete | 2008-08-25 09:40:08 +1200 (Mon, 25 Aug 2008) | 2 lines 190Changed paths: 191 M /trunk/weka/core/converters/DatabaseLoader.java 192 M /trunk/weka/experiment/DatabaseUtils.java 193 M /trunk/weka/experiment/DatabaseUtils.props 194 M /trunk/weka/experiment/DatabaseUtils.props.hsql 195 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver 196 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005 197 M /trunk/weka/experiment/DatabaseUtils.props.mysql 198 M /trunk/weka/experiment/DatabaseUtils.props.odbc 199 M /trunk/weka/experiment/DatabaseUtils.props.oracle 200 M /trunk/weka/experiment/DatabaseUtils.props.postgresql 201 M /trunk/weka/experiment/DatabaseUtils.props.sqlite3 202 M /trunk/weka/experiment/InstanceQuery.java 203 204added new type TIME (= 10) for correctly importing time columns from databases 205 206------------------------------------------------------------------------ 207r4500 | fracpete | 2008-08-25 09:46:14 +1200 (Mon, 25 Aug 2008) | 2 lines 208Changed paths: 209 M /trunk/weka/experiment/DatabaseUtils.props 210 M /trunk/weka/experiment/DatabaseUtils.props.hsql 211 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver 212 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005 213 M /trunk/weka/experiment/DatabaseUtils.props.mysql 214 M /trunk/weka/experiment/DatabaseUtils.props.odbc 215 M /trunk/weka/experiment/DatabaseUtils.props.oracle 216 M /trunk/weka/experiment/DatabaseUtils.props.postgresql 217 M /trunk/weka/experiment/DatabaseUtils.props.sqlite3 218 219fixed comments 220 221------------------------------------------------------------------------ 222r4501 | fracpete | 2008-08-25 09:49:54 +1200 (Mon, 25 Aug 2008) | 2 lines 223Changed paths: 224 M /trunk/weka/experiment/DatabaseUtils.props 225 M /trunk/weka/experiment/DatabaseUtils.props.hsql 226 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver 227 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005 228 M /trunk/weka/experiment/DatabaseUtils.props.mysql 229 M /trunk/weka/experiment/DatabaseUtils.props.odbc 230 M /trunk/weka/experiment/DatabaseUtils.props.oracle 231 M /trunk/weka/experiment/DatabaseUtils.props.postgresql 232 M /trunk/weka/experiment/DatabaseUtils.props.sqlite3 233 234fixed typo: gloat -> float 235 236------------------------------------------------------------------------ 237r4502 | mhall | 2008-08-25 09:51:58 +1200 (Mon, 25 Aug 2008) | 1 line 238Changed paths: 239 M /trunk/weka/experiment/RemoteEngine.java 240 M /trunk/weka/experiment/RemoteExperimentSubTask.java 241 242 243------------------------------------------------------------------------ 244r4505 | fracpete | 2008-08-25 10:33:48 +1200 (Mon, 25 Aug 2008) | 1 line 245Changed paths: 246 M /trunk/weka/classifiers/bayes/net/EditableBayesNet.java 247 M /trunk/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java 248 M /trunk/weka/core/Environment.java 249 M /trunk/weka/core/parser/java_cup/Lexer.java 250 251 252------------------------------------------------------------------------ 253r4506 | fracpete | 2008-08-25 11:44:12 +1200 (Mon, 25 Aug 2008) | 1 line 254Changed paths: 255 M /trunk/weka/gui/ResultHistoryPanel.java 256 257 258------------------------------------------------------------------------ 259r4507 | mhall | 2008-09-05 15:37:26 +1200 (Fri, 05 Sep 2008) | 1 line 260Changed paths: 261 M /trunk/weka/build.xml 262 263 264------------------------------------------------------------------------ 265r4508 | mhall | 2008-09-08 11:11:41 +1200 (Mon, 08 Sep 2008) | 1 line 266Changed paths: 267 M /trunk/weka/experiment/remote.policy 268 M /trunk/weka/experiment/remote.policy.example 269 270 271------------------------------------------------------------------------ 272r4509 | fracpete | 2008-09-08 14:41:56 +1200 (Mon, 08 Sep 2008) | 2 lines 273Changed paths: 274 M /trunk/weka/gui/PropertyDialog.java 275 276fixed constructor - now definitely modal (may have caused problems in conjunction with the array editor, not updating the values correctly) 277 278------------------------------------------------------------------------ 279r4510 | fracpete | 2008-09-08 14:43:40 +1200 (Mon, 08 Sep 2008) | 2 lines 280Changed paths: 281 M /trunk/weka/gui/GenericArrayEditor.java 282 M /trunk/weka/gui/GenericObjectEditor.java 283 284fixed rendering of strings: array entries are now centered and no longer cut off at the bottom 285 286------------------------------------------------------------------------ 287r4514 | fracpete | 2008-09-12 08:57:26 +1200 (Fri, 12 Sep 2008) | 1 line 288Changed paths: 289 M /trunk/weka/core/converters/DatabaseLoader.java 290 M /trunk/weka/experiment/InstanceQuery.java 291 292 293------------------------------------------------------------------------ 294r4515 | fracpete | 2008-09-15 11:00:10 +1200 (Mon, 15 Sep 2008) | 1 line 295Changed paths: 296 M /branches/book2ndEd-branch/weka/gui/visualize/PostscriptGraphics.java 297 M /trunk/weka/gui/visualize/PostscriptGraphics.java 298 299 300------------------------------------------------------------------------ 301r4517 | fracpete | 2008-09-15 15:24:52 +1200 (Mon, 15 Sep 2008) | 1 line 302Changed paths: 303 M /trunk/weka/gui/GenericObjectEditor.java 304 305 306------------------------------------------------------------------------ 307r4518 | mhall | 2008-09-17 13:40:27 +1200 (Wed, 17 Sep 2008) | 2 lines 308Changed paths: 309 A /trunk/weka/classifiers/pmml 310 A /trunk/weka/classifiers/pmml/consumer 311 A /trunk/weka/classifiers/pmml/consumer/GeneralRegression.java 312 A /trunk/weka/classifiers/pmml/consumer/NeuralNetwork.java 313 A /trunk/weka/classifiers/pmml/consumer/PMMLClassifier.java 314 A /trunk/weka/classifiers/pmml/consumer/Regression.java 315 A /trunk/weka/core/pmml 316 A /trunk/weka/core/pmml/Apply.java 317 A /trunk/weka/core/pmml/BuiltInArithmetic.java 318 A /trunk/weka/core/pmml/BuiltInMath.java 319 A /trunk/weka/core/pmml/BuiltInString.java 320 A /trunk/weka/core/pmml/Constant.java 321 A /trunk/weka/core/pmml/DefineFunction.java 322 A /trunk/weka/core/pmml/DerivedFieldMetaInfo.java 323 A /trunk/weka/core/pmml/Discretize.java 324 A /trunk/weka/core/pmml/Expression.java 325 A /trunk/weka/core/pmml/FieldMetaInfo.java 326 A /trunk/weka/core/pmml/FieldRef.java 327 A /trunk/weka/core/pmml/Function.java 328 A /trunk/weka/core/pmml/MappingInfo.java 329 A /trunk/weka/core/pmml/MiningFieldMetaInfo.java 330 A /trunk/weka/core/pmml/MiningSchema.java 331 A /trunk/weka/core/pmml/NormContinuous.java 332 A /trunk/weka/core/pmml/NormDiscrete.java 333 A /trunk/weka/core/pmml/PMMLFactory.java 334 A /trunk/weka/core/pmml/PMMLModel.java 335 A /trunk/weka/core/pmml/PMMLUtils.java 336 A /trunk/weka/core/pmml/TargetMetaInfo.java 337 A /trunk/weka/core/pmml/TransformationDictionary.java 338 339Initial import. 340 341------------------------------------------------------------------------ 342r4519 | mhall | 2008-09-17 13:44:18 +1200 (Wed, 17 Sep 2008) | 2 lines 343Changed paths: 344 M /trunk/weka/classifiers/Evaluation.java 345 M /trunk/weka/gui/explorer/ClassifierPanel.java 346 347Added support for loading and testing PMML classifiers. 348 349------------------------------------------------------------------------ 350r4520 | mhall | 2008-09-19 20:04:23 +1200 (Fri, 19 Sep 2008) | 2 lines 351Changed paths: 352 M /trunk/weka/classifiers/Evaluation.java 353 354Fixed bug that prevented predictions being printed out when class is numeric. 355 356------------------------------------------------------------------------ 357r4522 | fracpete | 2008-09-21 12:19:42 +1200 (Sun, 21 Sep 2008) | 2 lines 358Changed paths: 359 M /trunk/weka/filters/unsupervised/attribute/Add.java 360 361extended Add filter to in order to be able to add STRING and DATE attributes as well 362 363------------------------------------------------------------------------ 364r4525 | mhall | 2008-09-23 20:12:19 +1200 (Tue, 23 Sep 2008) | 2 lines 365Changed paths: 366 M /trunk/weka/core/pmml/PMMLFactory.java 367 368Removed some redundant constants 369 370------------------------------------------------------------------------ 371r4537 | mhall | 2008-10-07 11:48:44 +1300 (Tue, 07 Oct 2008) | 1 line 372Changed paths: 373 M /trunk/weka/core/Instance.java 374 M /trunk/weka/core/Instances.java 375 376 377------------------------------------------------------------------------ 378r4538 | mhall | 2008-10-09 10:56:49 +1300 (Thu, 09 Oct 2008) | 1 line 379Changed paths: 380 M /trunk/weka/build.xml 381 382Deleted cvs stuff and added new subversion targets. 383------------------------------------------------------------------------ 384r4541 | fracpete | 2008-10-13 14:56:19 +1300 (Mon, 13 Oct 2008) | 1 line 385Changed paths: 386 M /trunk/weka/gui/visualize/VisualizePanel.java 387 388added get-method for m_plot member (useful if an external application wants to save the generated ROC curve automatically) 389------------------------------------------------------------------------ 390r4543 | fracpete | 2008-10-13 16:19:52 +1300 (Mon, 13 Oct 2008) | 3 lines 391Changed paths: 392 M /trunk/weka/gui/visualize/VisualizePanel.java 393 394testing the pre-commit hook 395 396 397------------------------------------------------------------------------ 398r4544 | fracpete | 2008-10-13 16:22:35 +1300 (Mon, 13 Oct 2008) | 1 line 399Changed paths: 400 M /trunk/weka/gui/visualize/VisualizePanel.java 401 402updated copyright - for testing the pre-commit hook 403------------------------------------------------------------------------ 404r4545 | fracpete | 2008-10-13 23:02:01 +1300 (Mon, 13 Oct 2008) | 1 line 405Changed paths: 406 M /trunk/weka/gui/visualize/VisualizePanel.java 407 408added public removeAllPlots() methods 409------------------------------------------------------------------------ 410r4547 | mhall | 2008-10-15 04:06:52 +1300 (Wed, 15 Oct 2008) | 1 line 411Changed paths: 412 M /trunk/weka/classifiers/functions/supportVector/StringKernel.java 413 414Missing GPL header and copyright 415------------------------------------------------------------------------ 416r4549 | mhall | 2008-10-15 04:12:23 +1300 (Wed, 15 Oct 2008) | 1 line 417Changed paths: 418 M /trunk/weka/classifiers/functions/supportVector/CachedKernel.java 419 420Missing copyright notice 421------------------------------------------------------------------------ 422r4551 | mhall | 2008-10-15 05:04:44 +1300 (Wed, 15 Oct 2008) | 1 line 423Changed paths: 424 A /trunk/weka/filters/supervised/instance/SMOTE.java 425 426Initial import of Ryan Lichtenwalter's implementation of SMOTE 427------------------------------------------------------------------------ 428r4552 | mhall | 2008-10-15 05:07:49 +1300 (Wed, 15 Oct 2008) | 1 line 429Changed paths: 430 M /trunk/weka/gui/GenericObjectEditor.props 431 432Added SMOTE 433------------------------------------------------------------------------ 434r4553 | mhall | 2008-10-15 10:20:12 +1300 (Wed, 15 Oct 2008) | 1 line 435Changed paths: 436 M /trunk/weka/core/converters/CSVLoader.java 437 438Now doesn't load data into memory before tokenizing. Code tidied. 439------------------------------------------------------------------------ 440r4555 | fracpete | 2008-10-15 10:45:58 +1300 (Wed, 15 Oct 2008) | 4 lines 441Changed paths: 442 M /trunk/weka/filters/supervised/instance/SMOTE.java 443 444fixed indentation 445fixed option handling (pushed checks from setOptions method into actual set-methods; getOptions uses a vector now) 446removed the detectMinorityClass option completely 447added Javadoc comments for members 448------------------------------------------------------------------------ 449r4557 | fracpete | 2008-10-15 11:28:46 +1300 (Wed, 15 Oct 2008) | 1 line 450Changed paths: 451 M /trunk/weka/associations/AssociatorEvaluation.java 452 M /trunk/weka/associations/CheckAssociator.java 453 M /trunk/weka/associations/FilteredAssociator.java 454 M /trunk/weka/associations/GeneralizedSequentialPatterns.java 455 M /trunk/weka/associations/SingleAssociatorEnhancer.java 456 M /trunk/weka/associations/gsp/Element.java 457 M /trunk/weka/associations/gsp/Sequence.java 458 M /trunk/weka/attributeSelection/CheckAttributeSelection.java 459 M /trunk/weka/attributeSelection/SVMAttributeEval.java 460 M /trunk/weka/classifiers/BVDecomposeSegCVSub.java 461 M /trunk/weka/classifiers/bayes/NaiveBayesMultinomialUpdateable.java 462 M /trunk/weka/classifiers/bayes/WAODE.java 463 M /trunk/weka/classifiers/bayes/net/search/global/TAN.java 464 M /trunk/weka/classifiers/functions/LibSVM.java 465 M /trunk/weka/classifiers/functions/PLSClassifier.java 466 M /trunk/weka/classifiers/functions/SVMreg.java 467 M /trunk/weka/classifiers/functions/supportVector/CheckKernel.java 468 M /trunk/weka/classifiers/functions/supportVector/KernelEvaluation.java 469 M /trunk/weka/classifiers/functions/supportVector/Puk.java 470 M /trunk/weka/classifiers/functions/supportVector/RegOptimizer.java 471 M /trunk/weka/classifiers/functions/supportVector/RegSMO.java 472 M /trunk/weka/classifiers/functions/supportVector/RegSMOImproved.java 473 M /trunk/weka/classifiers/functions/supportVector/StringKernel.java 474 M /trunk/weka/classifiers/meta/ClassificationViaClustering.java 475 M /trunk/weka/classifiers/meta/GridSearch.java 476 M /trunk/weka/classifiers/meta/RandomSubSpace.java 477 M /trunk/weka/classifiers/mi/CitationKNN.java 478 M /trunk/weka/classifiers/mi/MDD.java 479 M /trunk/weka/classifiers/mi/MIBoost.java 480 M /trunk/weka/classifiers/mi/MIDD.java 481 M /trunk/weka/classifiers/mi/MIEMDD.java 482 M /trunk/weka/classifiers/mi/MILR.java 483 M /trunk/weka/classifiers/mi/MINND.java 484 M /trunk/weka/classifiers/mi/MIOptimalBall.java 485 M /trunk/weka/classifiers/mi/MISMO.java 486 M /trunk/weka/classifiers/mi/MISVM.java 487 M /trunk/weka/classifiers/mi/MIWrapper.java 488 M /trunk/weka/classifiers/mi/SimpleMI.java 489 M /trunk/weka/classifiers/mi/TLD.java 490 M /trunk/weka/classifiers/mi/TLDSimple.java 491 M /trunk/weka/classifiers/mi/supportVector/MIPolyKernel.java 492 M /trunk/weka/classifiers/mi/supportVector/MIRBFKernel.java 493 M /trunk/weka/classifiers/misc/MinMaxExtension.java 494 M /trunk/weka/classifiers/misc/OLM.java 495 M /trunk/weka/classifiers/misc/OSDL.java 496 M /trunk/weka/classifiers/misc/SerializedClassifier.java 497 M /trunk/weka/classifiers/misc/monotone/AbsoluteLossFunction.java 498 M /trunk/weka/classifiers/misc/monotone/BitMatrix.java 499 M /trunk/weka/classifiers/misc/monotone/BooleanBitMatrix.java 500 M /trunk/weka/classifiers/misc/monotone/Coordinates.java 501 M /trunk/weka/classifiers/misc/monotone/CumulativeDiscreteDistribution.java 502 M /trunk/weka/classifiers/misc/monotone/DiscreteDistribution.java 503 M /trunk/weka/classifiers/misc/monotone/DistributionUtils.java 504 M /trunk/weka/classifiers/misc/monotone/EnumerationIterator.java 505 M /trunk/weka/classifiers/misc/monotone/InstancesComparator.java 506 M /trunk/weka/classifiers/misc/monotone/InstancesUtil.java 507 M /trunk/weka/classifiers/misc/monotone/MultiDimensionalSort.java 508 M /trunk/weka/classifiers/misc/monotone/NominalLossFunction.java 509 M /trunk/weka/classifiers/misc/monotone/OSDLCore.java 510 M /trunk/weka/classifiers/misc/monotone/ZeroOneLossFunction.java 511 M /trunk/weka/clusterers/CheckClusterer.java 512 M /trunk/weka/clusterers/FilteredClusterer.java 513 M /trunk/weka/clusterers/RandomizableClusterer.java 514 M /trunk/weka/clusterers/RandomizableDensityBasedClusterer.java 515 M /trunk/weka/clusterers/RandomizableSingleClustererEnhancer.java 516 M /trunk/weka/clusterers/SingleClustererEnhancer.java 517 M /trunk/weka/clusterers/UpdateableClusterer.java 518 M /trunk/weka/core/AllJavadoc.java 519 M /trunk/weka/core/AttributeLocator.java 520 M /trunk/weka/core/Capabilities.java 521 M /trunk/weka/core/Capabilities.props 522 M /trunk/weka/core/CapabilitiesHandler.java 523 M /trunk/weka/core/Check.java 524 M /trunk/weka/core/CheckGOE.java 525 M /trunk/weka/core/CheckScheme.java 526 M /trunk/weka/core/ClassDiscovery.java 527 M /trunk/weka/core/Copyright.java 528 M /trunk/weka/core/Copyright.props 529 M /trunk/weka/core/Debug.java 530 M /trunk/weka/core/FindWithCapabilities.java 531 M /trunk/weka/core/GlobalInfoJavadoc.java 532 M /trunk/weka/core/Javadoc.java 533 M /trunk/weka/core/ListOptions.java 534 M /trunk/weka/core/MultiInstanceCapabilitiesHandler.java 535 M /trunk/weka/core/RelationalLocator.java 536 M /trunk/weka/core/SerializationHelper.java 537 M /trunk/weka/core/StringLocator.java 538 M /trunk/weka/core/TechnicalInformation.java 539 M /trunk/weka/core/TechnicalInformationHandler.java 540 M /trunk/weka/core/TechnicalInformationHandlerJavadoc.java 541 M /trunk/weka/core/TestInstances.java 542 M /trunk/weka/core/Trie.java 543 M /trunk/weka/core/converters/AbstractFileLoader.java 544 M /trunk/weka/core/converters/LibSVMLoader.java 545 M /trunk/weka/core/converters/LibSVMSaver.java 546 M /trunk/weka/core/converters/TextDirectoryLoader.java 547 M /trunk/weka/core/converters/XRFFLoader.java 548 M /trunk/weka/core/converters/XRFFSaver.java 549 M /trunk/weka/core/matrix/DoubleVector.java 550 M /trunk/weka/core/matrix/ExponentialFormat.java 551 M /trunk/weka/core/matrix/FlexibleDecimalFormat.java 552 M /trunk/weka/core/matrix/FloatingPointFormat.java 553 M /trunk/weka/core/matrix/IntVector.java 554 M /trunk/weka/core/neighboursearch/BallTree.java 555 M /trunk/weka/core/neighboursearch/CoverTree.java 556 M /trunk/weka/core/neighboursearch/KDTree.java 557 M /trunk/weka/core/neighboursearch/LinearNNSearch.java 558 M /trunk/weka/core/neighboursearch/NearestNeighbourSearch.java 559 M /trunk/weka/core/neighboursearch/PerformanceStats.java 560 M /trunk/weka/core/neighboursearch/TreePerformanceStats.java 561 M /trunk/weka/core/neighboursearch/balltrees/BallNode.java 562 M /trunk/weka/core/neighboursearch/balltrees/BallSplitter.java 563 M /trunk/weka/core/neighboursearch/balltrees/BallTreeConstructor.java 564 M /trunk/weka/core/neighboursearch/balltrees/BottomUpConstructor.java 565 M /trunk/weka/core/neighboursearch/balltrees/MedianDistanceFromArbitraryPoint.java 566 M /trunk/weka/core/neighboursearch/balltrees/MedianOfWidestDimension.java 567 M /trunk/weka/core/neighboursearch/balltrees/MiddleOutConstructor.java 568 M /trunk/weka/core/neighboursearch/balltrees/PointsClosestToFurthestChildren.java 569 M /trunk/weka/core/neighboursearch/balltrees/TopDownConstructor.java 570 M /trunk/weka/core/neighboursearch/covertrees/Stack.java 571 M /trunk/weka/core/neighboursearch/kdtrees/KDTreeNode.java 572 M /trunk/weka/core/neighboursearch/kdtrees/KDTreeNodeSplitter.java 573 M /trunk/weka/core/neighboursearch/kdtrees/KMeansInpiredMethod.java 574 M /trunk/weka/core/neighboursearch/kdtrees/MedianOfWidestDimension.java 575 M /trunk/weka/core/neighboursearch/kdtrees/MidPointOfWidestDimension.java 576 M /trunk/weka/core/neighboursearch/kdtrees/SlidingMidPointOfWidestSide.java 577 M /trunk/weka/core/parser/java_cup/Lexer.jflex 578 M /trunk/weka/core/stemmers/IteratedLovinsStemmer.java 579 M /trunk/weka/core/stemmers/LovinsStemmer.java 580 M /trunk/weka/core/stemmers/NullStemmer.java 581 M /trunk/weka/core/stemmers/SnowballStemmer.java 582 M /trunk/weka/core/stemmers/Stemmer.java 583 M /trunk/weka/core/stemmers/Stemming.java 584 M /trunk/weka/core/tokenizers/AlphabeticTokenizer.java 585 M /trunk/weka/core/tokenizers/CharacterDelimitedTokenizer.java 586 M /trunk/weka/core/tokenizers/NGramTokenizer.java 587 M /trunk/weka/core/tokenizers/Tokenizer.java 588 M /trunk/weka/core/tokenizers/WordTokenizer.java 589 M /trunk/weka/core/xml/XMLInstances.java 590 M /trunk/weka/datagenerators/ClassificationGenerator.java 591 M /trunk/weka/datagenerators/ClusterDefinition.java 592 M /trunk/weka/datagenerators/DataGenerator.java 593 M /trunk/weka/datagenerators/RegressionGenerator.java 594 M /trunk/weka/datagenerators/classifiers/classification/Agrawal.java 595 M /trunk/weka/datagenerators/classifiers/classification/BayesNet.java 596 M /trunk/weka/datagenerators/classifiers/classification/LED24.java 597 M /trunk/weka/datagenerators/classifiers/classification/RDG1.java 598 M /trunk/weka/datagenerators/classifiers/classification/RandomRBF.java 599 M /trunk/weka/datagenerators/classifiers/regression/Expression.java 600 M /trunk/weka/datagenerators/classifiers/regression/MexicanHat.java 601 M /trunk/weka/datagenerators/clusterers/BIRCHCluster.java 602 M /trunk/weka/datagenerators/clusterers/SubspaceCluster.java 603 M /trunk/weka/datagenerators/clusterers/SubspaceClusterDefinition.java 604 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver 605 M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005 606 M /trunk/weka/experiment/DatabaseUtils.props.mysql 607 M /trunk/weka/experiment/DatabaseUtils.props.odbc 608 M /trunk/weka/experiment/DatabaseUtils.props.oracle 609 M /trunk/weka/experiment/DatabaseUtils.props.postgresql 610 M /trunk/weka/filters/CheckSource.java 611 M /trunk/weka/filters/MultiFilter.java 612 M /trunk/weka/filters/SimpleBatchFilter.java 613 M /trunk/weka/filters/SimpleFilter.java 614 M /trunk/weka/filters/SimpleStreamFilter.java 615 M /trunk/weka/filters/Sourcable.java 616 M /trunk/weka/filters/supervised/attribute/AddClassification.java 617 M /trunk/weka/filters/supervised/attribute/PLSFilter.java 618 M /trunk/weka/filters/unsupervised/attribute/AddID.java 619 M /trunk/weka/filters/unsupervised/attribute/AddValues.java 620 M /trunk/weka/filters/unsupervised/attribute/Center.java 621 M /trunk/weka/filters/unsupervised/attribute/ClassAssigner.java 622 M /trunk/weka/filters/unsupervised/attribute/InterquartileRange.java 623 M /trunk/weka/filters/unsupervised/attribute/KernelFilter.java 624 M /trunk/weka/filters/unsupervised/attribute/MultiInstanceToPropositional.java 625 M /trunk/weka/filters/unsupervised/attribute/NominalToString.java 626 M /trunk/weka/filters/unsupervised/attribute/NumericCleaner.java 627 M /trunk/weka/filters/unsupervised/attribute/NumericToNominal.java 628 M /trunk/weka/filters/unsupervised/attribute/PartitionedMultiFilter.java 629 M /trunk/weka/filters/unsupervised/attribute/PropositionalToMultiInstance.java 630 M /trunk/weka/filters/unsupervised/attribute/RELAGGS.java 631 M /trunk/weka/filters/unsupervised/attribute/Wavelet.java 632 M /trunk/weka/filters/unsupervised/instance/RemoveFrequentValues.java 633 M /trunk/weka/gui/BrowserHelper.java 634 M /trunk/weka/gui/CheckBoxList.java 635 M /trunk/weka/gui/ConverterFileChooser.java 636 M /trunk/weka/gui/GUIEditors.props 637 M /trunk/weka/gui/GenericPropertiesCreator.excludes 638 M /trunk/weka/gui/JListHelper.java 639 M /trunk/weka/gui/Main.java 640 M /trunk/weka/gui/MainMenuExtension.java 641 M /trunk/weka/gui/SimpleCLI.props 642 M /trunk/weka/gui/SimpleCLIPanel.java 643 M /trunk/weka/gui/SimpleDateFormatEditor.java 644 M /trunk/weka/gui/SortedTableModel.java 645 M /trunk/weka/gui/beans/icons/New24.gif 646 M /trunk/weka/gui/experiment/Experimenter.props 647 M /trunk/weka/gui/experiment/ExperimenterDefaults.java 648 M /trunk/weka/gui/experiment/OutputFormatDialog.java 649 M /trunk/weka/gui/explorer/DataGeneratorPanel.java 650 M /trunk/weka/gui/explorer/Explorer.props 651 M /trunk/weka/gui/explorer/ExplorerDefaults.java 652 M /trunk/weka/gui/sql/ConnectionPanel.java 653 M /trunk/weka/gui/sql/DbUtils.java 654 M /trunk/weka/gui/sql/InfoPanel.java 655 M /trunk/weka/gui/sql/InfoPanelCellRenderer.java 656 M /trunk/weka/gui/sql/QueryPanel.java 657 M /trunk/weka/gui/sql/ResultPanel.java 658 M /trunk/weka/gui/sql/ResultSetHelper.java 659 M /trunk/weka/gui/sql/ResultSetTable.java 660 M /trunk/weka/gui/sql/ResultSetTableCellRenderer.java 661 M /trunk/weka/gui/sql/ResultSetTableModel.java 662 M /trunk/weka/gui/sql/SqlViewer.java 663 M /trunk/weka/gui/sql/SqlViewerDialog.java 664 M /trunk/weka/gui/sql/event/ConnectionEvent.java 665 M /trunk/weka/gui/sql/event/ConnectionListener.java 666 M /trunk/weka/gui/sql/event/HistoryChangedEvent.java 667 M /trunk/weka/gui/sql/event/HistoryChangedListener.java 668 M /trunk/weka/gui/sql/event/QueryExecuteEvent.java 669 M /trunk/weka/gui/sql/event/QueryExecuteListener.java 670 M /trunk/weka/gui/sql/event/ResultChangedEvent.java 671 M /trunk/weka/gui/sql/event/ResultChangedListener.java 672 M /trunk/weka/gui/visualize/BMPWriter.java 673 M /trunk/weka/gui/visualize/PNGWriter.java 674 M /trunk/weka/gui/visualize/plugins/VisualizePlugin.java 675 676no longer executable (left-overs from importing files from Windows into CVS) 677------------------------------------------------------------------------ 678r4559 | fracpete | 2008-10-15 11:40:25 +1300 (Wed, 15 Oct 2008) | 1 line 679Changed paths: 680 M /trunk/weka/gui/images/back.gif 681 M /trunk/weka/gui/images/empty_small.gif 682 M /trunk/weka/gui/images/error_small.gif 683 M /trunk/weka/gui/images/home.gif 684 M /trunk/weka/gui/images/information_small.gif 685 M /trunk/weka/gui/images/question_small.gif 686 M /trunk/weka/gui/images/resize.gif 687 M /trunk/weka/gui/images/weka_background.gif 688 M /trunk/weka/gui/images/weka_splash.gif 689 690no longer executable (left-overs from importing files on Windows into CVS) 691------------------------------------------------------------------------ 692r4564 | fracpete | 2008-10-15 11:59:23 +1300 (Wed, 15 Oct 2008) | 1 line 693Changed paths: 694 M /trunk/weka/classifiers/trees/BFTree.java 695 M /trunk/weka/classifiers/trees/SimpleCart.java 696 M /trunk/weka/core/MathematicalExpression.java 697 M /trunk/weka/core/OptionHandlerJavadoc.java 698 M /trunk/weka/experiment/remote.policy.example 699 700no longer executable (left-overs from importing files on Windows into CVS) 701------------------------------------------------------------------------ 702r4565 | mhall | 2008-10-15 15:48:26 +1300 (Wed, 15 Oct 2008) | 1 line 703Changed paths: 704 M /trunk/weka/filters/supervised/instance/SMOTE.java 705 706Fixed another setOptions bug 707------------------------------------------------------------------------ 708r4567 | mhall | 2008-10-17 03:37:34 +1300 (Fri, 17 Oct 2008) | 1 line 709Changed paths: 710 M /trunk/weka/core/Environment.java 711 712Added a method to return a set of keys 713------------------------------------------------------------------------ 714r4568 | mhall | 2008-10-17 03:42:48 +1300 (Fri, 17 Oct 2008) | 1 line 715Changed paths: 716 M /trunk/weka/gui/beans/FlowRunner.java 717 718Now sets an Internal.knowledgeflow.directory variable in weka.core.Environment when any of the load methods are called 719------------------------------------------------------------------------ 720r4571 | mhall | 2008-10-17 07:21:36 +1300 (Fri, 17 Oct 2008) | 1 line 721Changed paths: 722 M /trunk/weka/experiment/ClassifierSplitEvaluator.java 723 724Added weighted average IR statistics 725------------------------------------------------------------------------ 726r4573 | mhall | 2008-10-17 12:56:04 +1300 (Fri, 17 Oct 2008) | 1 line 727Changed paths: 728 M /trunk/weka/gui/GenericObjectEditor.java 729 730Methods that can't handle the data at all are now shown greyed out in the tree (rather than in red) and can't be selected. 731------------------------------------------------------------------------ 732r4577 | mhall | 2008-10-18 08:37:26 +1300 (Sat, 18 Oct 2008) | 1 line 733Changed paths: 734 M /trunk/weka/core/converters/AbstractFileSaver.java 735 736Added support for environment variables in the prefix and directory parameters 737------------------------------------------------------------------------ 738r4579 | mhall | 2008-10-18 08:58:14 +1300 (Sat, 18 Oct 2008) | 1 line 739Changed paths: 740 M /trunk/weka/gui/beans/xml/XMLBeans.java 741 742writeSaver was not always saving the directory and prefix 743------------------------------------------------------------------------ 744r4585 | mhall | 2008-10-24 15:21:38 +1300 (Fri, 24 Oct 2008) | 1 line 745Changed paths: 746 M /trunk/weka/gui/GenericObjectEditor.java 747 748Fixed a bug (introduced from the last change) where you couldn't select an item if it didn't support capabilities. 749------------------------------------------------------------------------ 750r4591 | mhall | 2008-10-29 12:12:09 +1300 (Wed, 29 Oct 2008) | 1 line 751Changed paths: 752 M /trunk/weka/gui/beans/Saver.java 753 M /trunk/weka/gui/beans/SaverCustomizer.java 754 755Now has an option to use just the prefix as the file name rather than prefix + relation name 756------------------------------------------------------------------------ 757r4592 | mhall | 2008-10-29 12:13:16 +1300 (Wed, 29 Oct 2008) | 1 line 758Changed paths: 759 M /trunk/weka/core/converters/AbstractFileSaver.java 760 761Now checks for empty filename in setDirAndPrefix() 762------------------------------------------------------------------------ 763r4602 | mhall | 2008-11-04 12:17:12 +1300 (Tue, 04 Nov 2008) | 1 line 764Changed paths: 765 M /trunk/weka/gui/beans/Classifier.java 766 M /trunk/weka/gui/beans/Filter.java 767 768Now allows for streamable filters that don't output any instances until the end of the stream (e.g. ReservoirSample) 769------------------------------------------------------------------------ 770r4604 | mhall | 2008-11-04 12:20:08 +1300 (Tue, 04 Nov 2008) | 1 line 771Changed paths: 772 M /trunk/weka/filters/unsupervised/instance/ReservoirSample.java 773 774Now a StreamableFilter 775------------------------------------------------------------------------ 776r4606 | mhall | 2008-11-06 09:40:58 +1300 (Thu, 06 Nov 2008) | 1 line 777Changed paths: 778 A /trunk/weka/classifiers/meta/RotationForest.java 779 780Initial import of Juan Rodriguez' implementation of Rotation Forests 781------------------------------------------------------------------------ 782r4608 | fracpete | 2008-11-08 22:23:00 +1300 (Sat, 08 Nov 2008) | 1 line 783Changed paths: 784 M /trunk/weka/classifiers/rules/JRip.java 785 M /trunk/weka/classifiers/rules/RuleStats.java 786 787added cleanUp method to RuleStats to set m_Data and m_Filter to null for dramatic memory savings (thanks to Bernhard for that hint) 788------------------------------------------------------------------------ 789r4611 | mhall | 2008-11-10 08:27:05 +1300 (Mon, 10 Nov 2008) | 1 line 790Changed paths: 791 M /trunk/weka/gui/GenericObjectEditor.props 792 793Added RotationForest 794------------------------------------------------------------------------ 795r4612 | mhall | 2008-11-10 10:03:20 +1300 (Mon, 10 Nov 2008) | 1 line 796Changed paths: 797 M /trunk/weka/classifiers/meta/RotationForest.java 798 799Some small changes from Juan 800------------------------------------------------------------------------ 801r4613 | mhall | 2008-11-10 10:05:21 +1300 (Mon, 10 Nov 2008) | 1 line 802Changed paths: 803 M /trunk/weka/attributeSelection/AttributeTransformer.java 804 805Changed interface so that implementers don't have to keep a copy of the training data in order to implement transformedData() 806------------------------------------------------------------------------ 807r4614 | mhall | 2008-11-10 10:06:37 +1300 (Mon, 10 Nov 2008) | 1 line 808Changed paths: 809 M /trunk/weka/attributeSelection/RankSearch.java 810 811Changed to reflect changes to AttributeTransformer 812------------------------------------------------------------------------ 813r4615 | mhall | 2008-11-10 10:07:00 +1300 (Mon, 10 Nov 2008) | 1 line 814Changed paths: 815 M /trunk/weka/attributeSelection/LatentSemanticAnalysis.java 816 M /trunk/weka/attributeSelection/PrincipalComponents.java 817 818Changed to reflect changes to AttributeTransformer and now do not keep a copy of the training data 819------------------------------------------------------------------------ 820r4616 | mhall | 2008-11-10 10:09:00 +1300 (Mon, 10 Nov 2008) | 1 line 821Changed paths: 822 M /trunk/weka/filters/unsupervised/attribute/PrincipalComponents.java 823 824No longer keeps a copy of the training data 825------------------------------------------------------------------------ 826r4617 | mhall | 2008-11-10 10:10:02 +1300 (Mon, 10 Nov 2008) | 1 line 827Changed paths: 828 M /trunk/weka/gui/explorer/AttributeSelectionPanel.java 829 830Changed to reflect changes to AttributeTransformer 831------------------------------------------------------------------------ 832r4626 | mhall | 2008-11-10 10:38:51 +1300 (Mon, 10 Nov 2008) | 1 line 833Changed paths: 834 M /trunk/weka/classifiers/meta/RotationForest.java 835 836Juan Rodriguesz has given copyright to the University of Waikato. 837------------------------------------------------------------------------ 838r4630 | mhall | 2008-11-10 13:56:50 +1300 (Mon, 10 Nov 2008) | 1 line 839Changed paths: 840 M /trunk/weka/gui/GUIChooser.java 841 842Revamped. 843------------------------------------------------------------------------ 844r4631 | mhall | 2008-11-10 13:57:07 +1300 (Mon, 10 Nov 2008) | 1 line 845Changed paths: 846 M /trunk/weka/gui/Main.java 847 848Added the bayes net editor to the tools menu 849------------------------------------------------------------------------ 850r4634 | mhall | 2008-11-11 07:53:39 +1300 (Tue, 11 Nov 2008) | 1 line 851Changed paths: 852 M /trunk/weka/filters/supervised/attribute/AttributeSelection.java 853 854Changed to reflect changes in AttributeTransformer 855------------------------------------------------------------------------ 856r4635 | mhall | 2008-11-11 07:55:16 +1300 (Tue, 11 Nov 2008) | 1 line 857Changed paths: 858 M /trunk/weka/classifiers/bayes/net/GUI.java 859 860Changed so that the menu bar can be got via a accessor method 861------------------------------------------------------------------------ 862r4637 | mhall | 2008-11-11 10:39:18 +1300 (Tue, 11 Nov 2008) | 1 line 863Changed paths: 864 M /trunk/weka/filters/unsupervised/attribute/PrincipalComponents.java 865 866Was still keeping a copy of the training data. 867------------------------------------------------------------------------ 868r4639 | mhall | 2008-11-11 10:42:34 +1300 (Tue, 11 Nov 2008) | 1 line 869Changed paths: 870 M /trunk/weka/gui/experiment/AlgorithmListPanel.java 871 872Fixed weird editing algorithm editing bug (sometimes seemed to edit the wrong scheme from the list) 873------------------------------------------------------------------------ 874r4641 | mhall | 2008-11-11 12:39:22 +1300 (Tue, 11 Nov 2008) | 1 line 875Changed paths: 876 M /trunk/weka/gui/GUIChooser.java 877 878Fixed menu rendering bug. 879------------------------------------------------------------------------ 880r4643 | mhall | 2008-11-11 13:55:47 +1300 (Tue, 11 Nov 2008) | 1 line 881Changed paths: 882 M /trunk/weka/gui/Main.java 883 884Removed old WekaDoc link from help menu and fixed url for WekaWiki. 885------------------------------------------------------------------------ 886r4646 | fracpete | 2008-11-12 09:52:00 +1300 (Wed, 12 Nov 2008) | 1 line 887Changed paths: 888 M /trunk/weka/core/converters/TextDirectoryLoader.java 889 890updated URLs 891------------------------------------------------------------------------ 892r4648 | fracpete | 2008-11-12 10:10:39 +1300 (Wed, 12 Nov 2008) | 1 line 893Changed paths: 894 M /trunk/weka/core/stemmers/SnowballStemmer.java 895 M /trunk/weka/gui/GenericPropertiesCreator.props 896 897updated URLs 898------------------------------------------------------------------------ 899r4662 | mhall | 2008-11-13 14:55:54 +1300 (Thu, 13 Nov 2008) | 1 line 900Changed paths: 901 A /trunk/src/main/java/weka (from /trunk/weka:4661) 902 D /trunk/weka 903 904Moving to new structure 905------------------------------------------------------------------------ 906r4665 | mhall | 2008-11-13 14:59:08 +1300 (Thu, 13 Nov 2008) | 1 line 907Changed paths: 908 A /trunk/build.xml (from /trunk/src/main/java/weka/build.xml:4664) 909 D /trunk/src/main/java/weka/build.xml 910 911Moving to top level 912------------------------------------------------------------------------ 913r4670 | mhall | 2008-11-13 16:21:14 +1300 (Thu, 13 Nov 2008) | 1 line 914Changed paths: 915 M /trunk/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java 916 917Now has an option to eliminate empty bins and an option to turn on equal frequency discretization. Removed unnecessary capabilities resriction 918------------------------------------------------------------------------ 919r4671 | mhall | 2008-11-13 16:25:06 +1300 (Thu, 13 Nov 2008) | 1 line 920Changed paths: 921 M /trunk/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java 922 923Updated javadoc 924------------------------------------------------------------------------ 925r4698 | mhall | 2008-11-14 11:39:21 +1300 (Fri, 14 Nov 2008) | 1 line 926Changed paths: 927 D /trunk/src 928 A /trunk/weka/src (from /trunk/src:4697) 929 930Move out of top level 931------------------------------------------------------------------------ 932r4708 | fracpete | 2008-11-16 16:03:33 +1300 (Sun, 16 Nov 2008) | 1 line 933Changed paths: 934 A /trunk/weka/parsers.xml (from /trunk/weka/src/main/java/weka/parsers.xml:4707) 935 D /trunk/weka/src/main/java/weka/parsers.xml 936 937moved ant build file for parsers 938------------------------------------------------------------------------ 939r4713 | mhall | 2008-11-17 14:55:21 +1300 (Mon, 17 Nov 2008) | 1 line 940Changed paths: 941 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToNominal.java 942 943Andreas Lof's patch for handling ranges of attributes 944------------------------------------------------------------------------ 945r4716 | mhall | 2008-11-19 13:36:25 +1300 (Wed, 19 Nov 2008) | 1 line 946Changed paths: 947 A /trunk/weka/src/main/java/weka/core/logging 948 A /trunk/weka/src/main/java/weka/core/logging/ConsoleLogger.java 949 A /trunk/weka/src/main/java/weka/core/logging/FileLogger.java 950 A /trunk/weka/src/main/java/weka/core/logging/Logger.java 951 A /trunk/weka/src/main/java/weka/core/logging/Logging.props 952 A /trunk/weka/src/main/java/weka/core/logging/OutputLogger.java 953 954Peter's central logging stuff. 955------------------------------------------------------------------------ 956r4717 | mhall | 2008-11-19 13:38:28 +1300 (Wed, 19 Nov 2008) | 1 line 957Changed paths: 958 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlow.java 959 960Added a call to core.logging at startup 961------------------------------------------------------------------------ 962r4718 | mhall | 2008-11-19 13:39:45 +1300 (Wed, 19 Nov 2008) | 1 line 963Changed paths: 964 M /trunk/weka/src/main/java/weka/gui/GUIChooser.java 965 M /trunk/weka/src/main/java/weka/gui/LogPanel.java 966 M /trunk/weka/src/main/java/weka/gui/Main.java 967 968Now uses central logging 969------------------------------------------------------------------------ 970r4719 | mhall | 2008-11-19 13:40:23 +1300 (Wed, 19 Nov 2008) | 1 line 971Changed paths: 972 M /trunk/weka/src/main/java/weka/gui/arffviewer/ArffViewer.java 973 974Now uses central logging 975------------------------------------------------------------------------ 976r4720 | mhall | 2008-11-19 13:40:55 +1300 (Wed, 19 Nov 2008) | 1 line 977Changed paths: 978 M /trunk/weka/src/main/java/weka/gui/boundaryvisualizer/BoundaryVisualizer.java 979 980Now uses central logging 981------------------------------------------------------------------------ 982r4721 | mhall | 2008-11-19 13:41:27 +1300 (Wed, 19 Nov 2008) | 1 line 983Changed paths: 984 M /trunk/weka/src/main/java/weka/gui/experiment/Experimenter.java 985 986Now uses central logging 987------------------------------------------------------------------------ 988r4722 | mhall | 2008-11-19 13:41:57 +1300 (Wed, 19 Nov 2008) | 1 line 989Changed paths: 990 M /trunk/weka/src/main/java/weka/gui/explorer/Explorer.java 991 992Now uses central logging 993------------------------------------------------------------------------ 994r4723 | mhall | 2008-11-19 13:42:20 +1300 (Wed, 19 Nov 2008) | 1 line 995Changed paths: 996 M /trunk/weka/src/main/java/weka/gui/graphvisualizer/GraphVisualizer.java 997 998Now uses central logging 999------------------------------------------------------------------------ 1000r4724 | mhall | 2008-11-19 13:42:49 +1300 (Wed, 19 Nov 2008) | 1 line 1001Changed paths: 1002 M /trunk/weka/src/main/java/weka/gui/sql/SqlViewer.java 1003 1004Now uses central logging 1005------------------------------------------------------------------------ 1006r4725 | mhall | 2008-11-19 13:43:18 +1300 (Wed, 19 Nov 2008) | 1 line 1007Changed paths: 1008 M /trunk/weka/src/main/java/weka/gui/treevisualizer/TreeVisualizer.java 1009 1010Now uses central logging 1011------------------------------------------------------------------------ 1012r4726 | mhall | 2008-11-19 13:43:40 +1300 (Wed, 19 Nov 2008) | 1 line 1013Changed paths: 1014 M /trunk/weka/src/main/java/weka/gui/visualize/VisualizePanel.java 1015 1016Now uses central logging 1017------------------------------------------------------------------------ 1018r4738 | fracpete | 2008-11-19 15:33:57 +1300 (Wed, 19 Nov 2008) | 1 line 1019Changed paths: 1020 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 1021 1022"Visualize classifier errors" now automatically selects "class" vs. "predicted class" as initial view 1023------------------------------------------------------------------------ 1024r4739 | mhall | 2008-11-19 16:04:25 +1300 (Wed, 19 Nov 2008) | 1 line 1025Changed paths: 1026 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/Regression.java 1027 1028Fixed a bug where predictor terms were not being printed out. Also predictor terms were being set as the result rather than being added in to the sum. 1029------------------------------------------------------------------------ 1030r4742 | fracpete | 2008-11-19 16:35:52 +1300 (Wed, 19 Nov 2008) | 1 line 1031Changed paths: 1032 M /trunk/weka/src/main/java/weka/core/PropertyPath.java 1033 1034the "find" method is now public 1035------------------------------------------------------------------------ 1036r4746 | mhall | 2008-11-22 19:33:23 +1300 (Sat, 22 Nov 2008) | 1 line 1037Changed paths: 1038 M /trunk/weka/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java 1039 1040Added a capabilities constraint of a minimum of twoinstances. 1041------------------------------------------------------------------------ 1042r4749 | mhall | 2008-11-22 21:47:49 +1300 (Sat, 22 Nov 2008) | 1 line 1043Changed paths: 1044 M /trunk/weka/src/main/java/weka/gui/beans/TextViewer.java 1045 1046Clear results action now actually clears all the result buffers :-) 1047------------------------------------------------------------------------ 1048r4751 | mhall | 2008-11-23 12:27:34 +1300 (Sun, 23 Nov 2008) | 1 line 1049Changed paths: 1050 M /trunk/weka/src/main/java/weka/gui/visualize/PlotData2D.java 1051 1052Now has a method for setting a plot name (in html perhaps) that is suitable for use as a tool tip 1053------------------------------------------------------------------------ 1054r4752 | mhall | 2008-11-23 12:28:00 +1300 (Sun, 23 Nov 2008) | 1 line 1055Changed paths: 1056 M /trunk/weka/src/main/java/weka/gui/visualize/LegendPanel.java 1057 1058Now sets tool tips for legend entries 1059------------------------------------------------------------------------ 1060r4753 | mhall | 2008-11-23 12:28:43 +1300 (Sun, 23 Nov 2008) | 1 line 1061Changed paths: 1062 M /trunk/weka/src/main/java/weka/gui/visualize/VisualizePanel.java 1063 1064Clear all plots clears the legend entry as well now. Added method to switch from legend panel back to attribute bars panel. 1065------------------------------------------------------------------------ 1066r4757 | mhall | 2008-11-23 12:32:24 +1300 (Sun, 23 Nov 2008) | 1 line 1067Changed paths: 1068 M /trunk/weka/src/main/java/weka/gui/beans/ModelPerformanceChart.java 1069 1070Now has user option for clearing all the plots 1071------------------------------------------------------------------------ 1072r4758 | mhall | 2008-11-23 12:33:47 +1300 (Sun, 23 Nov 2008) | 1 line 1073Changed paths: 1074 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 1075 1076Now sets plot names for threshold events in html and also sets the html tool tip for each plot name. 1077------------------------------------------------------------------------ 1078r4761 | mhall | 2008-11-24 13:39:29 +1300 (Mon, 24 Nov 2008) | 1 line 1079Changed paths: 1080 M /trunk/weka/src/main/java/weka/gui/beans/BatchClassifierEvent.java 1081 M /trunk/weka/src/main/java/weka/gui/beans/TestSetEvent.java 1082 M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetEvent.java 1083 1084Added a run number 1085------------------------------------------------------------------------ 1086r4762 | mhall | 2008-11-24 13:41:48 +1300 (Mon, 24 Nov 2008) | 1 line 1087Changed paths: 1088 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1089 M /trunk/weka/src/main/java/weka/gui/beans/ModelPerformanceChart.java 1090 M /trunk/weka/src/main/java/weka/gui/beans/TextViewer.java 1091 1092clear all results/plots now needs confirmation from user 1093------------------------------------------------------------------------ 1094r4763 | mhall | 2008-11-24 13:43:12 +1300 (Mon, 24 Nov 2008) | 1 line 1095Changed paths: 1096 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1097 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierCustomizer.java 1098 1099Now supports multiple threads of execution. 1100------------------------------------------------------------------------ 1101r4767 | mhall | 2008-11-24 16:01:20 +1300 (Mon, 24 Nov 2008) | 1 line 1102Changed paths: 1103 M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java 1104 1105Modified to handle the executionSlots property in weka.gui.beans.Classifier 1106------------------------------------------------------------------------ 1107r4769 | mhall | 2008-11-25 15:35:19 +1300 (Tue, 25 Nov 2008) | 1 line 1108Changed paths: 1109 M /trunk/weka/src/main/java/weka/gui/arffviewer/ArffPanel.java 1110 1111Changed so that you can now set all values of an attribute to missing using either ? or NaN 1112------------------------------------------------------------------------ 1113r4771 | mhall | 2008-11-25 21:05:16 +1300 (Tue, 25 Nov 2008) | 1 line 1114Changed paths: 1115 A /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMaker.java 1116 A /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMakerBeanInfo.java 1117 1118Initial import 1119------------------------------------------------------------------------ 1120r4772 | mhall | 2008-11-25 21:06:28 +1300 (Tue, 25 Nov 2008) | 1 line 1121Changed paths: 1122 A /trunk/weka/src/main/java/weka/gui/beans/icons/InstanceStreamToBatchMaker.gif 1123 A /trunk/weka/src/main/java/weka/gui/beans/icons/InstanceStreamToBatchMaker_animated.gif 1124 1125Initial import 1126------------------------------------------------------------------------ 1127r4775 | mhall | 2008-11-25 21:12:09 +1300 (Tue, 25 Nov 2008) | 1 line 1128Changed paths: 1129 M /trunk/weka/src/main/java/weka/gui/beans/Beans.props 1130 1131Added InstanceStreamToBatchMaker 1132------------------------------------------------------------------------ 1133r4777 | mhall | 2008-11-26 11:55:02 +1300 (Wed, 26 Nov 2008) | 1 line 1134Changed paths: 1135 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 1136 1137Fixed for incremental filters that may need to cache some instances before producing output (e.g. reservoir sampling) 1138------------------------------------------------------------------------ 1139r4778 | mhall | 2008-11-26 12:12:27 +1300 (Wed, 26 Nov 2008) | 1 line 1140Changed paths: 1141 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1142 1143Fixed NPE bug when stopping execution. 1144------------------------------------------------------------------------ 1145r4781 | mhall | 2008-11-28 08:26:43 +1300 (Fri, 28 Nov 2008) | 1 line 1146Changed paths: 1147 M /trunk/weka/src/main/java/weka/clusterers/XMeans.java 1148 1149Fixed bug that prevented min number of clusters being set correctly from the command line. 1150------------------------------------------------------------------------ 1151r4783 | mhall | 2008-11-28 10:57:29 +1300 (Fri, 28 Nov 2008) | 1 line 1152Changed paths: 1153 M /trunk/weka/src/main/java/weka/attributeSelection/CheckAttributeSelection.java 1154 1155Now prints more useful debug info in correctSearchInitialization 1156------------------------------------------------------------------------ 1157r4785 | mhall | 2008-11-28 15:38:05 +1300 (Fri, 28 Nov 2008) | 1 line 1158Changed paths: 1159 A /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java 1160 1161New status and log panel for the KnowledgeFlow 1162------------------------------------------------------------------------ 1163r4786 | mhall | 2008-11-28 15:40:20 +1300 (Fri, 28 Nov 2008) | 1 line 1164Changed paths: 1165 M /trunk/weka/src/main/java/weka/gui/beans/Associator.java 1166 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1167 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 1168 M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java 1169 M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java 1170 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1171 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 1172 M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java 1173 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1174 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 1175 M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java 1176 M /trunk/weka/src/main/java/weka/gui/beans/Saver.java 1177 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java 1178 1179Updates for new log/status panel 1180------------------------------------------------------------------------ 1181r4789 | mhall | 2008-11-29 08:18:51 +1300 (Sat, 29 Nov 2008) | 1 line 1182Changed paths: 1183 M /trunk/weka/src/main/java/weka/gui/LogPanel.java 1184 1185Added a new constructor. 1186------------------------------------------------------------------------ 1187r4791 | fracpete | 2008-11-29 12:00:30 +1300 (Sat, 29 Nov 2008) | 5 lines 1188Changed paths: 1189 M /trunk/weka/src/main/java/weka/clusterers/OPTICS.java 1190 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI/OPTICS_Visualizer.java 1191 1192added more options to OPTICS: 1193-no-gui: for suppressing the display of the OPTICS visualizer 1194-db-output <file>: for saving the generated database to (can be viewed with the OPTICS Visualizer) 1195 1196added main method to OPTICS_Visualizer to start it up as standalone application 1197------------------------------------------------------------------------ 1198r4792 | mhall | 2008-11-29 20:28:02 +1300 (Sat, 29 Nov 2008) | 1 line 1199Changed paths: 1200 M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java 1201 1202Fixed some concurrency issues 1203------------------------------------------------------------------------ 1204r4793 | mhall | 2008-11-29 20:28:18 +1300 (Sat, 29 Nov 2008) | 1 line 1205Changed paths: 1206 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1207 1208Fixed some concurrency issues 1209------------------------------------------------------------------------ 1210r4794 | mhall | 2008-11-29 20:29:55 +1300 (Sat, 29 Nov 2008) | 1 line 1211Changed paths: 1212 M /trunk/weka/src/main/java/weka/gui/beans/Associator.java 1213 M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java 1214 1215Fixed a minor status logging bug. 1216------------------------------------------------------------------------ 1217r4795 | mhall | 2008-11-29 20:30:54 +1300 (Sat, 29 Nov 2008) | 1 line 1218Changed paths: 1219 A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationConstraints.java 1220 1221Initial import. 1222------------------------------------------------------------------------ 1223r4796 | mhall | 2008-11-29 20:31:23 +1300 (Sat, 29 Nov 2008) | 1 line 1224Changed paths: 1225 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1226 1227Added support for ConfigurationConstraints 1228------------------------------------------------------------------------ 1229r4797 | mhall | 2008-11-29 20:33:44 +1300 (Sat, 29 Nov 2008) | 1 line 1230Changed paths: 1231 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 1232 1233Fixed a minor status logging bug. 1234------------------------------------------------------------------------ 1235r4802 | mhall | 2008-11-29 21:33:11 +1300 (Sat, 29 Nov 2008) | 1 line 1236Changed paths: 1237 M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java 1238 1239Added ability to change the background colour of a row in the status area if the message starts with either ERROR or WARNING 1240------------------------------------------------------------------------ 1241r4804 | mhall | 2008-11-30 21:49:38 +1300 (Sun, 30 Nov 2008) | 1 line 1242Changed paths: 1243 M /trunk/weka/src/main/java/weka/gui/beans/Associator.java 1244 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1245 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 1246 M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java 1247 M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java 1248 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1249 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 1250 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1251 M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java 1252 1253More improvements to logging and status messages. 1254------------------------------------------------------------------------ 1255r4806 | mhall | 2008-12-01 10:28:41 +1300 (Mon, 01 Dec 2008) | 1 line 1256Changed paths: 1257 M /trunk/weka/src/main/java/weka/gui/beans/Associator.java 1258 M /trunk/weka/src/main/java/weka/gui/beans/BeanCommon.java 1259 M /trunk/weka/src/main/java/weka/gui/beans/ClassAssigner.java 1260 M /trunk/weka/src/main/java/weka/gui/beans/ClassValuePicker.java 1261 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1262 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 1263 M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java 1264 M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java 1265 D /trunk/weka/src/main/java/weka/gui/beans/ConfigurationConstraints.java 1266 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1267 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 1268 M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java 1269 M /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMaker.java 1270 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1271 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 1272 M /trunk/weka/src/main/java/weka/gui/beans/MetaBean.java 1273 M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java 1274 M /trunk/weka/src/main/java/weka/gui/beans/Saver.java 1275 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java 1276 M /trunk/weka/src/main/java/weka/gui/beans/StripChart.java 1277 M /trunk/weka/src/main/java/weka/gui/beans/TestSetMaker.java 1278 M /trunk/weka/src/main/java/weka/gui/beans/TextViewer.java 1279 M /trunk/weka/src/main/java/weka/gui/beans/TrainTestSplitMaker.java 1280 M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetMaker.java 1281 1282Updated for changes to BeanCommon. 1283------------------------------------------------------------------------ 1284r4809 | mhall | 2008-12-01 14:22:15 +1300 (Mon, 01 Dec 2008) | 1 line 1285Changed paths: 1286 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1287 1288Removed short delay after queueing task. Not needed. 1289------------------------------------------------------------------------ 1290r4810 | mhall | 2008-12-01 14:22:43 +1300 (Mon, 01 Dec 2008) | 1 line 1291Changed paths: 1292 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 1293 1294Updated to reflect changes for multi-threaded components (e.g. Classifier) 1295------------------------------------------------------------------------ 1296r4813 | mhall | 2008-12-01 16:15:04 +1300 (Mon, 01 Dec 2008) | 1 line 1297Changed paths: 1298 M /trunk/weka/src/main/java/weka/gui/beans/Associator.java 1299 M /trunk/weka/src/main/java/weka/gui/beans/ClassValuePicker.java 1300 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 1301 M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java 1302 M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java 1303 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1304 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 1305 M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java 1306 M /trunk/weka/src/main/java/weka/gui/beans/Saver.java 1307 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java 1308 M /trunk/weka/src/main/java/weka/gui/beans/TestSetMaker.java 1309 M /trunk/weka/src/main/java/weka/gui/beans/TrainTestSplitMaker.java 1310 M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetMaker.java 1311 1312More status/log updates. 1313------------------------------------------------------------------------ 1314r4814 | mhall | 2008-12-01 16:16:00 +1300 (Mon, 01 Dec 2008) | 1 line 1315Changed paths: 1316 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 1317 1318More status/log updates. 1319------------------------------------------------------------------------ 1320r4817 | mhall | 2008-12-02 14:41:17 +1300 (Tue, 02 Dec 2008) | 1 line 1321Changed paths: 1322 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 1323 1324Added simple logging to the console when executed from the command line 1325------------------------------------------------------------------------ 1326r4819 | mhall | 2008-12-02 15:06:08 +1300 (Tue, 02 Dec 2008) | 1 line 1327Changed paths: 1328 A /trunk/weka/src/main/java/weka/classifiers/trees/LADTree.java 1329 1330Initial import. 1331------------------------------------------------------------------------ 1332r4820 | mhall | 2008-12-02 15:07:13 +1300 (Tue, 02 Dec 2008) | 1 line 1333Changed paths: 1334 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1335 1336Added LADTree. 1337------------------------------------------------------------------------ 1338r4828 | fracpete | 2008-12-04 12:05:36 +1300 (Thu, 04 Dec 2008) | 1 line 1339Changed paths: 1340 M /trunk/weka/src/main/java/weka/classifiers/meta/GridSearch.java 1341 1342added the "kappa statistic" to the list of measures that one can evaluate on 1343------------------------------------------------------------------------ 1344r4829 | mhall | 2008-12-05 11:18:21 +1300 (Fri, 05 Dec 2008) | 1 line 1345Changed paths: 1346 M /trunk/weka/src/main/java/weka/gui/beans/BeanInstance.java 1347 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1348 1349Changed the fonts for component labels and connection labels from monospaced to default to improve readability under Windows 1350------------------------------------------------------------------------ 1351r4831 | mhall | 2008-12-07 19:48:55 +1300 (Sun, 07 Dec 2008) | 1 line 1352Changed paths: 1353 A /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1354 1355initial import of Adrian Pino's implementation of scatter search. 1356------------------------------------------------------------------------ 1357r4834 | mhall | 2008-12-07 20:41:14 +1300 (Sun, 07 Dec 2008) | 1 line 1358Changed paths: 1359 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1360 1361Added SubsetByExpression to the list of unsupervised filters (was already in thel list of all filters) 1362------------------------------------------------------------------------ 1363r4835 | mhall | 2008-12-07 20:43:35 +1300 (Sun, 07 Dec 2008) | 1 line 1364Changed paths: 1365 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1366 1367Added Wavelet to the list of unsupervised filters (was already in thel list of all filters) 1368------------------------------------------------------------------------ 1369r4836 | mhall | 2008-12-09 11:00:06 +1300 (Tue, 09 Dec 2008) | 1 line 1370Changed paths: 1371 M /trunk/weka/src/main/java/weka/gui/beans/Saver.java 1372 1373Saver now sets io thread to null in finally block so that isBusy() will return false when no saving is occuring. 1374------------------------------------------------------------------------ 1375r4838 | mhall | 2008-12-09 21:28:31 +1300 (Tue, 09 Dec 2008) | 1 line 1376Changed paths: 1377 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 1378 1379Added a general option to output the global information (synopsis) for the classifier. 1380------------------------------------------------------------------------ 1381r4840 | mhall | 2008-12-09 21:41:21 +1300 (Tue, 09 Dec 2008) | 1 line 1382Changed paths: 1383 M /trunk/weka/src/main/java/weka/clusterers/ClusterEvaluation.java 1384 1385Added a general option to output the global information (synopsis) for the clusterer. 1386------------------------------------------------------------------------ 1387r4842 | mhall | 2008-12-10 15:46:31 +1300 (Wed, 10 Dec 2008) | 1 line 1388Changed paths: 1389 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 1390 1391Now no longer prints classification summary and confusion matrix when -p option is selected (i.e. now more like what the book version outputs in this situation). 1392------------------------------------------------------------------------ 1393r4848 | mhall | 2008-12-11 08:08:40 +1300 (Thu, 11 Dec 2008) | 1 line 1394Changed paths: 1395 M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1396 1397Adrain has given copyright to UoW. 1398------------------------------------------------------------------------ 1399r4849 | mhall | 2008-12-11 08:12:31 +1300 (Thu, 11 Dec 2008) | 1 line 1400Changed paths: 1401 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1402 1403Added ScatterSearchV1 1404------------------------------------------------------------------------ 1405r4852 | mhall | 2008-12-13 22:51:40 +1300 (Sat, 13 Dec 2008) | 1 line 1406Changed paths: 1407 M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java 1408 1409instanceToArray now uses sparse instance methods (faster for sparse instances now). Added replace missing values by default (can be turned off with an option). 1410------------------------------------------------------------------------ 1411r4853 | fracpete | 2008-12-14 10:30:30 +1300 (Sun, 14 Dec 2008) | 1 line 1412Changed paths: 1413 M /trunk/weka/src/main/java/weka/core/converters/LibSVMLoader.java 1414 1415generates SparseInstance objects now 1416------------------------------------------------------------------------ 1417r4854 | fracpete | 2008-12-14 10:30:57 +1300 (Sun, 14 Dec 2008) | 1 line 1418Changed paths: 1419 A /trunk/weka/src/main/java/weka/core/converters/SVMLightLoader.java 1420 A /trunk/weka/src/main/java/weka/core/converters/SVMLightSaver.java 1421 1422loader/saver for the svm light data format 1423------------------------------------------------------------------------ 1424r4856 | mhall | 2008-12-16 10:00:10 +1300 (Tue, 16 Dec 2008) | 1 line 1425Changed paths: 1426 A /trunk/weka/src/main/java/weka/classifiers/functions/LibLINEAR.java 1427 1428Initial import of Benedikt Waldvogel's wrapper for the liblinear functions 1429------------------------------------------------------------------------ 1430r4863 | mhall | 2008-12-16 15:20:48 +1300 (Tue, 16 Dec 2008) | 1 line 1431Changed paths: 1432 M /trunk/weka/src/main/java/weka/gui/GUIChooser.java 1433 1434Made the KnowledgeFlow's window a bit bigger. 1435------------------------------------------------------------------------ 1436r4866 | mhall | 2008-12-16 16:01:22 +1300 (Tue, 16 Dec 2008) | 1 line 1437Changed paths: 1438 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1439 1440Added LibLINEAR 1441------------------------------------------------------------------------ 1442r4899 | fracpete | 2008-12-26 14:09:05 +1300 (Fri, 26 Dec 2008) | 1 line 1443Changed paths: 1444 M /trunk/weka/src/main/java/weka/attributeSelection/LFSMethods.java 1445 M /trunk/weka/src/main/java/weka/attributeSelection/LinearForwardSelection.java 1446 M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1447 M /trunk/weka/src/main/java/weka/attributeSelection/SubsetSizeForwardSelection.java 1448 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 1449 M /trunk/weka/src/main/java/weka/classifiers/bayes/DMNBtext.java 1450 M /trunk/weka/src/main/java/weka/classifiers/bayes/blr/LaplacePriorImpl.java 1451 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/EditableBayesNet.java 1452 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/MarginCalculator.java 1453 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PrecomputedKernelMatrixKernel.java 1454 M /trunk/weka/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java 1455 M /trunk/weka/src/main/java/weka/classifiers/trees/FT.java 1456 M /trunk/weka/src/main/java/weka/classifiers/trees/LADTree.java 1457 M /trunk/weka/src/main/java/weka/classifiers/trees/ft/FTtree.java 1458 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java 1459 M /trunk/weka/src/main/java/weka/clusterers/CLOPE.java 1460 M /trunk/weka/src/main/java/weka/clusterers/Clusterer.java 1461 M /trunk/weka/src/main/java/weka/core/Environment.java 1462 M /trunk/weka/src/main/java/weka/core/Instance.java 1463 M /trunk/weka/src/main/java/weka/core/Instances.java 1464 M /trunk/weka/src/main/java/weka/core/Jython.java 1465 M /trunk/weka/src/main/java/weka/core/SparseInstance.java 1466 M /trunk/weka/src/main/java/weka/core/converters/ConverterUtils.java 1467 M /trunk/weka/src/main/java/weka/core/neighboursearch/balltrees/MiddleOutConstructor.java 1468 M /trunk/weka/src/main/java/weka/core/parser/JFlex/CountEmitter.java 1469 M /trunk/weka/src/main/java/weka/core/parser/JFlex/Emitter.java 1470 M /trunk/weka/src/main/java/weka/core/parser/JFlex/HiLowEmitter.java 1471 M /trunk/weka/src/main/java/weka/core/parser/JFlex/Macros.java 1472 M /trunk/weka/src/main/java/weka/core/parser/JFlex/Out.java 1473 M /trunk/weka/src/main/java/weka/core/parser/JFlex/PackEmitter.java 1474 M /trunk/weka/src/main/java/weka/core/parser/JFlex/RegExp.java 1475 M /trunk/weka/src/main/java/weka/core/parser/JFlex/Skeleton.java 1476 M /trunk/weka/src/main/java/weka/core/parser/java_cup/emit.java 1477 M /trunk/weka/src/main/java/weka/core/parser/java_cup/lalr_item.java 1478 M /trunk/weka/src/main/java/weka/core/parser/java_cup/runtime/lr_parser.java 1479 M /trunk/weka/src/main/java/weka/core/parser/java_cup/runtime/virtual_parse_stack.java 1480 M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java 1481 M /trunk/weka/src/main/java/weka/core/xml/XStream.java 1482 M /trunk/weka/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java 1483 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToNominal.java 1484 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1485 1486fixed Javadoc documentation errors that showed up during Javadoc generation ("ant docs") 1487------------------------------------------------------------------------ 1488r4901 | fracpete | 2008-12-29 18:14:52 +1300 (Mon, 29 Dec 2008) | 1 line 1489Changed paths: 1490 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/alignbottom.png 1491 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/alignleft.png 1492 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/alignright.png 1493 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/aligntop.png 1494 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/arrow-s.png 1495 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/arrow.png 1496 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/centerhorizontal.png 1497 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/centervertical.png 1498 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/copy.png 1499 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/cut.png 1500 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/help.png 1501 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/layout.png 1502 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/line-s.png 1503 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/line.png 1504 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/lines-s.png 1505 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/lines.png 1506 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/new.png 1507 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/open.png 1508 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/oval-s.png 1509 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/oval.png 1510 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/paste.png 1511 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/print.png 1512 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/rect-s.png 1513 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/rect.png 1514 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/redo.png 1515 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/rrect.png 1516 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/save.png 1517 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/select-s.png 1518 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/select.png 1519 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/spacehorizontal.png 1520 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/spacevertical.png 1521 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/undo.png 1522 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/zoomin.png 1523 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/zoomout.png 1524 1525background is now transparent (no longer ugly grey background), using indexed PNGs with alpha channel 1526------------------------------------------------------------------------ 1527r4902 | fracpete | 2008-12-29 18:15:27 +1300 (Mon, 29 Dec 2008) | 1 line 1528Changed paths: 1529 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/GUI.java 1530 1531uses now weka.gui.ConverterFileChooser instead of plain JFileChooser for loading/saving datasets 1532------------------------------------------------------------------------ 1533r4910 | fracpete | 2008-12-30 15:14:04 +1300 (Tue, 30 Dec 2008) | 2 lines 1534Changed paths: 1535 M /trunk/weka/src/main/java/weka/core/converters/CSVSaver.java 1536 1537due to changes in ARFF format (output of instance weights), the Instance.toString() couldn't be used anymore to generate CSV output 1538added options to output CSV file with tab instead of comma as field separator and to specify a custom string for missing values (e.g., 999) 1539------------------------------------------------------------------------ 1540r4911 | fracpete | 2008-12-30 15:15:15 +1300 (Tue, 30 Dec 2008) | 1 line 1541Changed paths: 1542 M /trunk/weka/src/main/java/weka/core/converters/AbstractFileLoader.java 1543 1544makeOptionStr and runFileLoader are now aware of loaders implementing weka.core.OptionHandler 1545------------------------------------------------------------------------ 1546r4912 | fracpete | 2008-12-30 15:17:02 +1300 (Tue, 30 Dec 2008) | 1 line 1547Changed paths: 1548 M /trunk/weka/src/main/java/weka/core/converters/SerializedInstancesSaver.java 1549 1550fixed saving to streams 1551------------------------------------------------------------------------ 1552r4914 | fracpete | 2008-12-30 15:18:16 +1300 (Tue, 30 Dec 2008) | 2 lines 1553Changed paths: 1554 M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java 1555 1556added options to force attributes to be nominal or string 1557added option for specifying custom string representing a missing value (e.g., 999 instead of ?) 1558------------------------------------------------------------------------ 1559r4915 | fracpete | 2008-12-30 15:19:08 +1300 (Tue, 30 Dec 2008) | 1 line 1560Changed paths: 1561 M /trunk/weka/src/main/java/weka/gui/ConverterFileChooser.java 1562 1563one can now popup a GenericObjectEditor to further customize the loader/saver 1564------------------------------------------------------------------------ 1565r4917 | fracpete | 2008-12-30 15:27:15 +1300 (Tue, 30 Dec 2008) | 1 line 1566Changed paths: 1567 M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java 1568 M /trunk/weka/src/main/java/weka/core/converters/CSVSaver.java 1569 1570updated Javadoc 1571------------------------------------------------------------------------ 1572r4920 | mhall | 2008-12-31 16:27:46 +1300 (Wed, 31 Dec 2008) | 1 line 1573Changed paths: 1574 M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1575 1576Removed non-utf characters. 1577------------------------------------------------------------------------ 1578r4922 | mhall | 2008-12-31 16:33:33 +1300 (Wed, 31 Dec 2008) | 1 line 1579Changed paths: 1580 M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1581 1582Removed non-utf characters. 1583------------------------------------------------------------------------ 1584r4923 | fracpete | 2009-01-05 14:08:09 +1300 (Mon, 05 Jan 2009) | 1 line 1585Changed paths: 1586 M /trunk/weka/src/main/java/weka/core/converters/ConverterUtils.java 1587 1588fixed DataSource class when using a Loader (could end up trying to read from a closed stream) 1589------------------------------------------------------------------------ 1590r4929 | mhall | 2009-01-05 21:17:25 +1300 (Mon, 05 Jan 2009) | 1 line 1591Changed paths: 1592 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 1593 1594log object was not transient causing binary serialization to fail. 1595------------------------------------------------------------------------ 1596r4932 | mhall | 2009-01-05 22:16:28 +1300 (Mon, 05 Jan 2009) | 1 line 1597Changed paths: 1598 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 1599 1600Fixed a status message. 1601------------------------------------------------------------------------ 1602r4935 | fracpete | 2009-01-07 16:00:18 +1300 (Wed, 07 Jan 2009) | 1 line 1603Changed paths: 1604 M /trunk/weka/src/main/java/weka/core/Instances.java 1605 1606one can now compare the headers of two files via "weka.core.Instances headers <file1> <file2>"; enables one to perform a quick test on the commandline 1607------------------------------------------------------------------------ 1608r4939 | fracpete | 2009-01-11 11:29:25 +1300 (Sun, 11 Jan 2009) | 5 lines 1609Changed paths: 1610 M /trunk/weka/.classpath.default 1611 M /trunk/weka/build.xml 1612 A /trunk/weka/lib/JFlex.jar 1613 A /trunk/weka/lib/README 1614 A /trunk/weka/lib/java-cup.jar 1615 M /trunk/weka/parsers.xml 1616 M /trunk/weka/src/main/java/weka/core/MathematicalExpression.java 1617 M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Parser.cup 1618 M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Parser.java 1619 M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Scanner.java 1620 M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Scanner.jflex 1621 M /trunk/weka/src/main/java/weka/core/mathematicalexpression/sym.java 1622 D /trunk/weka/src/main/java/weka/core/parser 1623 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MathExpression.java 1624 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Parser.cup 1625 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Parser.java 1626 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Scanner.java 1627 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Scanner.jflex 1628 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/sym.java 1629 1630added java-cup.jar and JFlex.jar to "lib" directory 1631removed package weka.core.parser 1632adapted all imports and classpaths (removing prefix "weka.core.parser.") 1633"compile" target in build.xml copies the java_cup/runtime directory of the java-cup.jar into the build/classes directory, since these classes are the only ones necessary at runtime 1634added lib/README to list versions and links of used libraries 1635------------------------------------------------------------------------ 1636r4941 | fracpete | 2009-01-11 11:52:16 +1300 (Sun, 11 Jan 2009) | 1 line 1637Changed paths: 1638 M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1639 1640removed non-ascii characters 1641------------------------------------------------------------------------ 1642r4949 | mhall | 2009-01-12 10:23:02 +1300 (Mon, 12 Jan 2009) | 1 line 1643Changed paths: 1644 M /trunk/weka/src/main/java/weka/gui/beans/ClassValuePicker.java 1645 1646Now clears any warning status messages once problems are resolved. 1647------------------------------------------------------------------------ 1648r4951 | fracpete | 2009-01-16 08:57:55 +1300 (Fri, 16 Jan 2009) | 1 line 1649Changed paths: 1650 M /trunk/weka/src/main/java/weka/gui/sql/ResultSetHelper.java 1651 1652didn't list any data for ResultSets of type ResultSet.TYPE_FORWARD_ONLY, e.g., Sqlite 1653------------------------------------------------------------------------ 1654r4953 | mhall | 2009-01-16 20:15:44 +1300 (Fri, 16 Jan 2009) | 1 line 1655Changed paths: 1656 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1657 1658Fixed nasty bug that prevented a MetaBean that had been stored in the user tab from being binary serialized when the flow was saved. 1659------------------------------------------------------------------------ 1660r4954 | mhall | 2009-01-16 20:17:22 +1300 (Fri, 16 Jan 2009) | 1 line 1661Changed paths: 1662 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 1663 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1664 1665Small error/interrupted status message bug fix. 1666------------------------------------------------------------------------ 1667r4960 | fracpete | 2009-01-17 13:26:25 +1300 (Sat, 17 Jan 2009) | 3 lines 1668Changed paths: 1669 M /trunk/weka/src/main/java/weka/gui/treevisualizer/TreeVisualizer.java 1670 A /trunk/weka/src/main/java/weka/gui/treevisualizer/TreeVisualizer.props 1671 1672added props file for color customization of the TreeVisualizer 1673in response to odd behavior on Mac OS X when saving tree to file: 1674https://list.scms.waikato.ac.nz/mailman/htdig/wekalist/2009-January/015661.html 1675------------------------------------------------------------------------ 1676r4962 | mhall | 2009-01-20 13:54:39 +1300 (Tue, 20 Jan 2009) | 1 line 1677Changed paths: 1678 A /trunk/weka/src/main/java/weka/core/EnvironmentHandler.java 1679 1680Initial import 1681------------------------------------------------------------------------ 1682r4963 | mhall | 2009-01-20 13:55:31 +1300 (Tue, 20 Jan 2009) | 1 line 1683Changed paths: 1684 M /trunk/weka/src/main/java/weka/core/Environment.java 1685 1686Changed so that clients can use either a system-wide shared set of environment variables, or a local set 1687------------------------------------------------------------------------ 1688r4964 | mhall | 2009-01-20 13:56:22 +1300 (Tue, 20 Jan 2009) | 1 line 1689Changed paths: 1690 M /trunk/weka/src/main/java/weka/core/converters/AbstractFileLoader.java 1691 M /trunk/weka/src/main/java/weka/core/converters/AbstractFileSaver.java 1692 1693Altered to reflect changes to Environment.java 1694------------------------------------------------------------------------ 1695r4965 | mhall | 2009-01-20 13:57:06 +1300 (Tue, 20 Jan 2009) | 1 line 1696Changed paths: 1697 M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java 1698 1699Altered to reflect changes to Environment.java 1700------------------------------------------------------------------------ 1701r4966 | mhall | 2009-01-20 13:57:53 +1300 (Tue, 20 Jan 2009) | 1 line 1702Changed paths: 1703 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 1704 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1705 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java 1706 1707Altered to reflect changes to Environment.java 1708------------------------------------------------------------------------ 1709r4973 | fracpete | 2009-01-21 13:45:35 +1300 (Wed, 21 Jan 2009) | 1 line 1710Changed paths: 1711 M /trunk/weka/src/main/java/weka/gui/LogWindow.java 1712 1713print-method now checks whether the object is NULL; if that's the case, it just prints the string "null" otherwise it uses the object's toString() method 1714------------------------------------------------------------------------ 1715r4974 | mhall | 2009-01-21 14:21:51 +1300 (Wed, 21 Jan 2009) | 1 line 1716Changed paths: 1717 M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java 1718 1719Added Craig Bruce's implementation of the Drawable interface. 1720------------------------------------------------------------------------ 1721r4976 | mhall | 2009-01-21 14:57:49 +1300 (Wed, 21 Jan 2009) | 1 line 1722Changed paths: 1723 A /trunk/weka/src/main/java/weka/attributeSelection/TabuSearch.java 1724 1725Initial import of Adrian Pino's implementation of Tabu search 1726------------------------------------------------------------------------ 1727r4977 | mhall | 2009-01-21 14:58:29 +1300 (Wed, 21 Jan 2009) | 1 line 1728Changed paths: 1729 M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java 1730 1731Fixed doc bug 1732------------------------------------------------------------------------ 1733r4983 | mhall | 2009-01-23 15:02:35 +1300 (Fri, 23 Jan 2009) | 1 line 1734Changed paths: 1735 M /trunk/weka/src/main/java/weka/core/converters/AbstractFileLoader.java 1736 M /trunk/weka/src/main/java/weka/core/converters/AbstractFileSaver.java 1737 M /trunk/weka/src/main/java/weka/core/converters/ArffLoader.java 1738 M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java 1739 M /trunk/weka/src/main/java/weka/core/converters/SVMLightLoader.java 1740 M /trunk/weka/src/main/java/weka/core/converters/XRFFLoader.java 1741 1742More changes to support local environment variables 1743------------------------------------------------------------------------ 1744r4984 | mhall | 2009-01-23 15:06:18 +1300 (Fri, 23 Jan 2009) | 1 line 1745Changed paths: 1746 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 1747 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 1748 M /trunk/weka/src/main/java/weka/gui/beans/Saver.java 1749 M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java 1750 1751More changes to support local environment variables 1752------------------------------------------------------------------------ 1753r4992 | mhall | 2009-01-23 15:19:51 +1300 (Fri, 23 Jan 2009) | 1 line 1754Changed paths: 1755 M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java 1756 1757Doc update 1758------------------------------------------------------------------------ 1759r4994 | fracpete | 2009-01-25 17:04:43 +1300 (Sun, 25 Jan 2009) | 1 line 1760Changed paths: 1761 M /trunk/weka/src/main/java/weka/core/Attribute.java 1762 M /trunk/weka/src/main/java/weka/core/Instances.java 1763 1764added method equalsHeaderMsg to weka.core.Instances and method equalsMsg to weka.core.Attribute for more details on why equality test fails 1765------------------------------------------------------------------------ 1766r4995 | fracpete | 2009-01-26 11:42:14 +1300 (Mon, 26 Jan 2009) | 1 line 1767Changed paths: 1768 M /trunk/weka/src/main/java/weka/gui/graphvisualizer/GraphEdge.java 1769 M /trunk/weka/src/main/java/weka/gui/graphvisualizer/GraphNode.java 1770 1771made some members public (otherwise there's no way of accessing them outside the package) 1772------------------------------------------------------------------------ 1773r4996 | fracpete | 2009-01-26 11:43:27 +1300 (Mon, 26 Jan 2009) | 1 line 1774Changed paths: 1775 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1776 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props 1777 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 1778 A /trunk/weka/src/main/java/weka/gui/visualize/plugins/GraphVisualizePlugin.java 1779 A /trunk/weka/src/main/java/weka/gui/visualize/plugins/TreeVisualizePlugin.java 1780 1781added plugin support in the Explorer/ClassifierPanel for visualizing XML BIF graphs (generated by BayesNet, for instance) and trees in GraphViz's dotty format 1782------------------------------------------------------------------------ 1783r4997 | fracpete | 2009-01-26 14:52:20 +1300 (Mon, 26 Jan 2009) | 1 line 1784Changed paths: 1785 M /trunk/weka/src/main/java/weka/attributeSelection/ClassifierSubsetEval.java 1786 M /trunk/weka/src/main/java/weka/attributeSelection/LatentSemanticAnalysis.java 1787 M /trunk/weka/src/main/java/weka/attributeSelection/PrincipalComponents.java 1788 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 1789 M /trunk/weka/src/main/java/weka/classifiers/lazy/IB1.java 1790 M /trunk/weka/src/main/java/weka/classifiers/lazy/IBk.java 1791 M /trunk/weka/src/main/java/weka/classifiers/lazy/KStar.java 1792 M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java 1793 M /trunk/weka/src/main/java/weka/classifiers/rules/NNge.java 1794 M /trunk/weka/src/main/java/weka/clusterers/ClusterEvaluation.java 1795 M /trunk/weka/src/main/java/weka/core/Attribute.java 1796 M /trunk/weka/src/main/java/weka/core/CheckScheme.java 1797 M /trunk/weka/src/main/java/weka/core/Instance.java 1798 M /trunk/weka/src/main/java/weka/estimators/CheckEstimator.java 1799 M /trunk/weka/src/main/java/weka/filters/Filter.java 1800 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 1801 M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java 1802 M /trunk/weka/src/main/java/weka/gui/streams/InstanceJoiner.java 1803 M /trunk/weka/src/test/java/weka/core/converters/AbstractFileConverterTest.java 1804 1805added new Instances.equalHeadersMsg(...) method to errors message for more informative output (why the equality test failed) 1806------------------------------------------------------------------------ 1807r4998 | fracpete | 2009-01-26 15:04:51 +1300 (Mon, 26 Jan 2009) | 1 line 1808Changed paths: 1809 M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java 1810 1811added "plugins" menu item for visualizing trees (only gets displayed when plugins available) 1812------------------------------------------------------------------------ 1813r4999 | mhall | 2009-01-28 10:18:39 +1300 (Wed, 28 Jan 2009) | 1 line 1814Changed paths: 1815 M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetMaker.java 1816 1817Stop notification was not getting reset. 1818------------------------------------------------------------------------ 1819r5002 | mhall | 2009-01-29 09:29:28 +1300 (Thu, 29 Jan 2009) | 1 line 1820Changed paths: 1821 M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java 1822 1823Fixed bug that prevented LWL from running incrementally from the command line. 1824------------------------------------------------------------------------ 1825r5007 | fracpete | 2009-01-29 16:31:07 +1300 (Thu, 29 Jan 2009) | 1 line 1826Changed paths: 1827 M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java 1828 1829removed unnecessary imports 1830------------------------------------------------------------------------ 1831r5008 | mhall | 2009-01-30 11:35:39 +1300 (Fri, 30 Jan 2009) | 1 line 1832Changed paths: 1833 M /trunk/weka/src/main/java/weka/core/pmml/Expression.java 1834 1835Fixed typo 1836------------------------------------------------------------------------ 1837r5012 | fracpete | 2009-01-30 23:22:20 +1300 (Fri, 30 Jan 2009) | 1 line 1838Changed paths: 1839 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1840 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props 1841 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 1842 A /trunk/weka/src/main/java/weka/gui/visualize/plugins/ErrorVisualizePlugin.java 1843 1844added another plugin support in the Explorer/Classify panel, this time for visualizing classification errors 1845------------------------------------------------------------------------ 1846r5014 | fracpete | 2009-01-31 16:02:26 +1300 (Sat, 31 Jan 2009) | 3 lines 1847Changed paths: 1848 A /trunk/weka/src/main/java/weka/gui/visualize/InstanceInfo.java 1849 A /trunk/weka/src/main/java/weka/gui/visualize/InstanceInfoFrame.java 1850 M /trunk/weka/src/main/java/weka/gui/visualize/Plot2D.java 1851 M /trunk/weka/src/main/java/weka/gui/visualize/Visualize.props 1852 1853externalized the JFrame for displaying the instance info, moved it into its own class: weka.gui.visualized.InstanceInfoFrame 1854it is now possible to define one's own instance info frame: needs to be derived from javax.swing.JFrame and implement the interface weka.gui.visualized.InstanceInfo 1855this class then needs to be listed under property "weka.gui.visualize.Plot2D.instanceInfoFrame" in the weka/gui/visualize/Visualize.props properties file 1856------------------------------------------------------------------------ 1857r5015 | fracpete | 2009-01-31 16:04:57 +1300 (Sat, 31 Jan 2009) | 1 line 1858Changed paths: 1859 M /trunk/weka/src/main/java/weka/gui/visualize/Visualize.props 1860 1861fixed badly worded comment in props file 1862------------------------------------------------------------------------ 1863r5017 | mhall | 2009-01-31 20:52:27 +1300 (Sat, 31 Jan 2009) | 1 line 1864Changed paths: 1865 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1866 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMakerBeanInfo.java 1867 1868Added a parameter to allow the original ordering of the instances to be preserved (i.e. disables randomization and stratification) 1869------------------------------------------------------------------------ 1870r5018 | fracpete | 2009-02-02 10:57:45 +1300 (Mon, 02 Feb 2009) | 5 lines 1871Changed paths: 1872 D /trunk/weka/src/main/java/weka/classifiers/JythonClassifier.java 1873 A /trunk/weka/src/main/java/weka/classifiers/scripting 1874 A /trunk/weka/src/main/java/weka/classifiers/scripting/GroovyClassifier.java 1875 A /trunk/weka/src/main/java/weka/classifiers/scripting/JythonClassifier.java (from /trunk/weka/src/main/java/weka/classifiers/JythonClassifier.java:5017) 1876 D /trunk/weka/src/main/java/weka/core/Jython.java 1877 D /trunk/weka/src/main/java/weka/core/JythonObject.java 1878 D /trunk/weka/src/main/java/weka/core/JythonSerializableObject.java 1879 M /trunk/weka/src/main/java/weka/core/SerializedObject.java 1880 A /trunk/weka/src/main/java/weka/core/scripting 1881 A /trunk/weka/src/main/java/weka/core/scripting/Groovy.java 1882 A /trunk/weka/src/main/java/weka/core/scripting/Jython.java (from /trunk/weka/src/main/java/weka/core/Jython.java:5017) 1883 A /trunk/weka/src/main/java/weka/core/scripting/JythonObject.java (from /trunk/weka/src/main/java/weka/core/JythonObject.java:5017) 1884 A /trunk/weka/src/main/java/weka/core/scripting/JythonSerializableObject.java (from /trunk/weka/src/main/java/weka/core/JythonSerializableObject.java:5017) 1885 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 1886 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props 1887 1888added support for Groovy http://groovy.codehaus.org/ 1889moved scripting classes into sub-packages: 1890 weka.core.scripting 1891 weka.classifiers.scripting 1892added wrapper classifier for executing classifiers implemented as Groovy script: weka.classifiers.scripting.GrooyClassifier 1893------------------------------------------------------------------------ 1894r5021 | mhall | 2009-02-02 15:49:00 +1300 (Mon, 02 Feb 2009) | 1 line 1895Changed paths: 1896 M /trunk/weka/src/main/java/weka/core/pmml/Apply.java 1897 M /trunk/weka/src/main/java/weka/core/pmml/DefineFunction.java 1898 M /trunk/weka/src/main/java/weka/core/pmml/DerivedFieldMetaInfo.java 1899 M /trunk/weka/src/main/java/weka/core/pmml/Discretize.java 1900 M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java 1901 M /trunk/weka/src/main/java/weka/core/pmml/NormContinuous.java 1902 M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java 1903 M /trunk/weka/src/main/java/weka/core/pmml/TransformationDictionary.java 1904 1905Now allows derived fields to reference other derived fields (as long as the referring field is defined *after* the referred field). Discretize now allows for continuous optypes (i.e. in this case, the bin values will be parsed as numbers and the resulting derived attribute will be numeric rather than nominal). 1906------------------------------------------------------------------------ 1907r5023 | mhall | 2009-02-02 15:53:36 +1300 (Mon, 02 Feb 2009) | 1 line 1908Changed paths: 1909 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 1910 1911Doc update. 1912------------------------------------------------------------------------ 1913r5025 | mhall | 2009-02-03 14:00:26 +1300 (Tue, 03 Feb 2009) | 1 line 1914Changed paths: 1915 M /trunk/weka/src/main/java/weka/core/pmml/FieldRef.java 1916 M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java 1917 1918Fixed bug that meant that field definitions were not being set correctly in the case of derived fields contained in local transformation that referred to other derived fields in local transformations 1919------------------------------------------------------------------------ 1920r5027 | mhall | 2009-02-04 10:00:35 +1300 (Wed, 04 Feb 2009) | 1 line 1921Changed paths: 1922 M /trunk/weka/src/main/java/weka/core/pmml/NormDiscrete.java 1923 1924Now delays setting up field defs. 1925------------------------------------------------------------------------ 1926r5028 | mhall | 2009-02-04 10:25:38 +1300 (Wed, 04 Feb 2009) | 1 line 1927Changed paths: 1928 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/NeuralNetwork.java 1929 1930Fixed a bug introduced by the improvements in derived fields where field definitions for inputs were not being set correctly. 1931------------------------------------------------------------------------ 1932r5031 | mhall | 2009-02-04 14:01:42 +1300 (Wed, 04 Feb 2009) | 1 line 1933Changed paths: 1934 M /trunk/weka/src/main/java/weka/core/pmml/Apply.java 1935 M /trunk/weka/src/main/java/weka/core/pmml/Discretize.java 1936 M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java 1937 M /trunk/weka/src/main/java/weka/core/pmml/NormContinuous.java 1938 M /trunk/weka/src/main/java/weka/core/pmml/NormDiscrete.java 1939 M /trunk/weka/src/main/java/weka/core/pmml/TransformationDictionary.java 1940 1941Simplified the setp-up process for expressions and derived fields 1942------------------------------------------------------------------------ 1943r5032 | mhall | 2009-02-04 14:02:30 +1300 (Wed, 04 Feb 2009) | 1 line 1944Changed paths: 1945 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/NeuralNetwork.java 1946 1947Simplified the setp-up process for expressions and derived fields 1948------------------------------------------------------------------------ 1949r5034 | mhall | 2009-02-06 21:13:15 +1300 (Fri, 06 Feb 2009) | 1 line 1950Changed paths: 1951 M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java 1952 1953Now prints a status and log message if an exception arises during processing of an incoming event. 1954------------------------------------------------------------------------ 1955r5036 | fracpete | 2009-02-07 10:35:12 +1300 (Sat, 07 Feb 2009) | 1 line 1956Changed paths: 1957 M /trunk/weka/src/main/java/weka/gui/explorer/Explorer.props 1958 M /trunk/weka/src/main/java/weka/gui/explorer/ExplorerDefaults.java 1959 M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java 1960 1961the initial directory for datasets in the Preprocesspanel of the Explorer can now be set in the weka/gui/explorer/Explorer.props file as well (property "InitialDirectory") 1962------------------------------------------------------------------------ 1963r5040 | fracpete | 2009-02-07 11:03:25 +1300 (Sat, 07 Feb 2009) | 1 line 1964Changed paths: 1965 M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java 1966 1967added example to tiptext of weights property (it is a blank-separated list of weights, e.g., "1 1 1" for a 3-class problem) 1968------------------------------------------------------------------------ 1969r5041 | fracpete | 2009-02-07 11:16:06 +1300 (Sat, 07 Feb 2009) | 1 line 1970Changed paths: 1971 M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java 1972 1973updated tiptext, listOptions and Javadoc in regards to -W parameter/weights property for weights for classes (wasn't very informative) 1974------------------------------------------------------------------------ 1975r5043 | fracpete | 2009-02-07 12:37:53 +1300 (Sat, 07 Feb 2009) | 1 line 1976Changed paths: 1977 M /trunk/weka/src/main/java/weka/core/Instances.java 1978 1979fixed typo in equalHeadersMsg method ("=!" instead of "!=") 1980------------------------------------------------------------------------ 1981r5047 | fracpete | 2009-02-07 13:01:41 +1300 (Sat, 07 Feb 2009) | 2 lines 1982Changed paths: 1983 M /trunk/weka/src/main/java/weka/filters/SimpleBatchFilter.java 1984 M /trunk/weka/src/main/java/weka/filters/SimpleStreamFilter.java 1985 1986methods input and batchFinished now correctly throw Exceptions (like in Filter base class) 1987removed try-catch-blocks that did become unnecessary in the process 1988------------------------------------------------------------------------ 1989r5050 | fracpete | 2009-02-07 13:05:35 +1300 (Sat, 07 Feb 2009) | 1 line 1990Changed paths: 1991 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/AddClassification.java 1992 1993checks now whether a header is present in the serialized model file and if yes, compares it to the dataset that is to be filtered 1994------------------------------------------------------------------------ 1995r5052 | fracpete | 2009-02-07 13:59:37 +1300 (Sat, 07 Feb 2009) | 1 line 1996Changed paths: 1997 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddCluster.java 1998 1999added "-serialized <file>" option to load a serialized clusterer model to be used instead of training a clustering algorithm on the first batch of data 2000------------------------------------------------------------------------ 2001r5054 | fracpete | 2009-02-07 20:24:03 +1300 (Sat, 07 Feb 2009) | 1 line 2002Changed paths: 2003 M /trunk/weka/src/main/java/weka/gui/BrowserHelper.java 2004 2005added method for creating a link based on a JLabel component 2006------------------------------------------------------------------------ 2007r5055 | fracpete | 2009-02-10 13:45:11 +1300 (Tue, 10 Feb 2009) | 1 line 2008Changed paths: 2009 M /trunk/weka/src/main/java/weka/core/Tee.java 2010 2011added missing print/println/write methods 2012------------------------------------------------------------------------ 2013r5058 | mhall | 2009-02-13 15:51:13 +1300 (Fri, 13 Feb 2009) | 1 line 2014Changed paths: 2015 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2016 M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java 2017 2018Now allows for predicting test sets (using a pre-built classifier) that have been loaded from CSV files where all class values are missing and hence the legal values for a nominal class aren't known. 2019------------------------------------------------------------------------ 2020r5059 | mhall | 2009-02-13 16:41:28 +1300 (Fri, 13 Feb 2009) | 1 line 2021Changed paths: 2022 M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java 2023 2024Prediction appender was re-using an array for creating the instance values in instance events! Fixed. 2025------------------------------------------------------------------------ 2026r5060 | mhall | 2009-02-13 16:42:21 +1300 (Fri, 13 Feb 2009) | 1 line 2027Changed paths: 2028 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2029 2030Now clears any status/error messages fromt the log when new data arrives. 2031------------------------------------------------------------------------ 2032r5063 | mhall | 2009-02-15 14:57:13 +1300 (Sun, 15 Feb 2009) | 1 line 2033Changed paths: 2034 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2035 2036Fixed bug that prevented a trained model from being used to generate predictions when a train and test set connection from separate sources are connected. Improved some status messages. Enforced the use of a ClassAssigner to set the class attribute (it used to default to the last attribute if none was set, but this was not consistent under all situations). 2037------------------------------------------------------------------------ 2038r5066 | mhall | 2009-02-15 16:47:17 +1300 (Sun, 15 Feb 2009) | 1 line 2039Changed paths: 2040 A /trunk/weka/src/main/java/weka/attributeSelection/SignificanceAttributeEval.java 2041 2042Initial import. 2043------------------------------------------------------------------------ 2044r5067 | mhall | 2009-02-15 16:48:32 +1300 (Sun, 15 Feb 2009) | 1 line 2045Changed paths: 2046 M /trunk/weka/src/main/java/weka/attributeSelection/SignificanceAttributeEval.java 2047 2048Added revision string 2049------------------------------------------------------------------------ 2050r5072 | mhall | 2009-02-16 10:29:03 +1300 (Mon, 16 Feb 2009) | 1 line 2051Changed paths: 2052 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 2053 2054Now suppresses detailed class information when printing predictions. 2055------------------------------------------------------------------------ 2056r5074 | mhall | 2009-02-18 13:49:46 +1300 (Wed, 18 Feb 2009) | 1 line 2057Changed paths: 2058 M /trunk/weka/src/main/java/weka/filters/Filter.java 2059 2060output() was calling stringFreeStructure() on the output format instances resulting in a structure that was incompatible for subsequent batches. 2061------------------------------------------------------------------------ 2062r5078 | mhall | 2009-02-18 16:37:02 +1300 (Wed, 18 Feb 2009) | 1 line 2063Changed paths: 2064 M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java 2065 2066Now saves the relationNameAsFilename property for Savers 2067------------------------------------------------------------------------ 2068r5079 | mhall | 2009-02-18 16:40:18 +1300 (Wed, 18 Feb 2009) | 1 line 2069Changed paths: 2070 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2071 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 2072 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 2073 M /trunk/weka/src/main/java/weka/gui/beans/LoaderCustomizer.java 2074 M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java 2075 2076FlowRunner now allows startable beans to be executed sequentially as well as in parallel (default). The order that Startable beans (i.e. data sources) in a flow are launched can be controlled by setting the name of the bean using a number as a prefix (e.g. for an ArffLoader that loads the training data, it might be called 1:LoadMyTrainingData) 2077------------------------------------------------------------------------ 2078r5086 | mhall | 2009-02-23 12:31:33 +1300 (Mon, 23 Feb 2009) | 1 line 2079Changed paths: 2080 M /trunk/weka/src/main/java/weka/gui/visualize/AttributePanel.java 2081 M /trunk/weka/src/main/java/weka/gui/visualize/ClassPanel.java 2082 M /trunk/weka/src/main/java/weka/gui/visualize/Plot2D.java 2083 M /trunk/weka/src/main/java/weka/gui/visualize/VisualizePanel.java 2084 2085Now does not set any of the colours for the points, classes etc. equal to the background colour of the plot panel. 2086------------------------------------------------------------------------ 2087r5088 | mhall | 2009-02-23 16:47:25 +1300 (Mon, 23 Feb 2009) | 1 line 2088Changed paths: 2089 M /trunk/weka/src/main/java/weka/experiment/InstanceQuery.java 2090 2091Added Andy Hessling's fix for problems with sqlite jdbc driver versions > v042. 2092------------------------------------------------------------------------ 2093r5091 | mhall | 2009-02-24 09:49:03 +1300 (Tue, 24 Feb 2009) | 1 line 2094Changed paths: 2095 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MathExpression.java 2096 2097Fixed bug where, for SparseInstances, attributes to be ignored by the filter were getting zero'd 2098------------------------------------------------------------------------ 2099r5093 | mhall | 2009-02-24 16:11:05 +1300 (Tue, 24 Feb 2009) | 1 line 2100Changed paths: 2101 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 2102 2103Added George Forman's unweighted micro and macro averaged F-measure methods. 2104------------------------------------------------------------------------ 2105r5094 | mhall | 2009-02-24 16:27:40 +1300 (Tue, 24 Feb 2009) | 1 line 2106Changed paths: 2107 M /trunk/weka/src/main/java/weka/experiment/ClassifierSplitEvaluator.java 2108 2109Added support for George Forman's unweighted micro and macro averaged F-measure metrics. 2110------------------------------------------------------------------------ 2111r5097 | mhall | 2009-02-25 14:21:03 +1300 (Wed, 25 Feb 2009) | 1 line 2112Changed paths: 2113 M /trunk/weka/src/main/java/weka/gui/beans/TestSetMaker.java 2114 2115A flag was not being reset after a stop caused by downstream components. 2116------------------------------------------------------------------------ 2117r5098 | mhall | 2009-02-25 14:23:15 +1300 (Wed, 25 Feb 2009) | 1 line 2118Changed paths: 2119 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2120 2121Structure only TestSet events were causing an error message to be printed when a classifier had not yet been built. These are now ignored and an error is only generated if the classifier has not been trained when the actual test data arrives. 2122------------------------------------------------------------------------ 2123r5102 | mhall | 2009-02-26 15:00:43 +1300 (Thu, 26 Feb 2009) | 1 line 2124Changed paths: 2125 M /trunk/weka/src/main/java/weka/core/pmml/MiningFieldMetaInfo.java 2126 2127Outlier treatment method was not getting initialized correctly, except in the default case. 2128------------------------------------------------------------------------ 2129r5104 | mhall | 2009-02-26 15:07:36 +1300 (Thu, 26 Feb 2009) | 1 line 2130Changed paths: 2131 A /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java 2132 2133Initial import 2134------------------------------------------------------------------------ 2135r5105 | mhall | 2009-02-26 15:09:10 +1300 (Thu, 26 Feb 2009) | 1 line 2136Changed paths: 2137 M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java 2138 2139Added support for TreeModel. 2140------------------------------------------------------------------------ 2141r5116 | mhall | 2009-02-27 10:12:33 +1300 (Fri, 27 Feb 2009) | 1 line 2142Changed paths: 2143 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java 2144 2145Now only reads ScoreDistribution elements if the mining function is set to classification. TreeModel schema does not preclude ScoreDistribution elements for regression trees (but it doen't make sense to have them). 2146------------------------------------------------------------------------ 2147r5117 | mhall | 2009-02-27 10:31:52 +1300 (Fri, 27 Feb 2009) | 1 line 2148Changed paths: 2149 A /trunk/weka/src/main/java/weka/core/pmml/Array.java 2150 2151Initial import. 2152------------------------------------------------------------------------ 2153r5121 | mhall | 2009-02-27 20:48:53 +1300 (Fri, 27 Feb 2009) | 1 line 2154Changed paths: 2155 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 2156 2157Added SignificanceAttributeEval 2158------------------------------------------------------------------------ 2159r5122 | mhall | 2009-02-27 20:53:44 +1300 (Fri, 27 Feb 2009) | 1 line 2160Changed paths: 2161 M /trunk/weka/src/main/java/weka/classifiers/trees/J48.java 2162 2163Changed m_root from private to protected 2164------------------------------------------------------------------------ 2165r5126 | fracpete | 2009-03-01 17:35:28 +1300 (Sun, 01 Mar 2009) | 2 lines 2166Changed paths: 2167 M /trunk/weka/src/main/java/weka/experiment/DatabaseResultListener.java 2168 A /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.msaccess 2169 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.odbc 2170 2171running Experiments in the Experimenter now works with MS Access as well: second call to getString(4) in method "determineColumnConstraints" of DatabaseResultListener class resulted in Exception (fixed this by using local variable) 2172added sample setup for MS Access: DatabaseUtils.props.msaccess 2173------------------------------------------------------------------------ 2174r5129 | mhall | 2009-03-03 09:26:36 +1300 (Tue, 03 Mar 2009) | 1 line 2175Changed paths: 2176 M /trunk/weka/src/main/java/weka/associations/ItemSet.java 2177 2178Can now handle SparseInstances. If an instance is sparse, zero's are treated in the same manner as missing values are in standard instances. This should make for a more intuitive data format for standard market basket data and allow bigger data sets to be loaded. 2179------------------------------------------------------------------------ 2180r5130 | mhall | 2009-03-03 14:42:37 +1300 (Tue, 03 Mar 2009) | 1 line 2181Changed paths: 2182 M /trunk/weka/src/main/java/weka/associations/Apriori.java 2183 M /trunk/weka/src/main/java/weka/associations/AprioriItemSet.java 2184 M /trunk/weka/src/main/java/weka/associations/ItemSet.java 2185 A /trunk/weka/src/main/java/weka/associations/vote.arff 2186 A /trunk/weka/src/main/java/weka/associations/votes.arff 2187 2188Made the treatment of zeros as missing an option to maintain backwards compatibility. 2189------------------------------------------------------------------------ 2190r5134 | mhall | 2009-03-04 16:27:41 +1300 (Wed, 04 Mar 2009) | 1 line 2191Changed paths: 2192 M /trunk/weka/src/main/java/weka/gui/beans/BeanCommon.java 2193 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 2194 M /trunk/weka/src/main/java/weka/gui/beans/MetaBean.java 2195 2196Removed a superfluous method from BeanCommon 2197------------------------------------------------------------------------ 2198r5136 | mhall | 2009-03-04 16:36:43 +1300 (Wed, 04 Mar 2009) | 1 line 2199Changed paths: 2200 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java 2201 2202Added serial version UIDs for main and nested classes. 2203------------------------------------------------------------------------ 2204r5142 | fracpete | 2009-03-05 16:27:23 +1300 (Thu, 05 Mar 2009) | 3 lines 2205Changed paths: 2206 A /trunk/weka/src/main/java/weka/gui/DocumentPrinting.java 2207 M /trunk/weka/src/main/java/weka/gui/GUIChooser.java 2208 M /trunk/weka/src/main/java/weka/gui/Main.java 2209 A /trunk/weka/src/main/java/weka/gui/ReaderToTextPane.java 2210 M /trunk/weka/src/main/java/weka/gui/SimpleCLI.java 2211 M /trunk/weka/src/main/java/weka/gui/SimpleCLIPanel.java 2212 A /trunk/weka/src/main/java/weka/gui/images/cut.gif 2213 A /trunk/weka/src/main/java/weka/gui/images/delete.gif 2214 A /trunk/weka/src/main/java/weka/gui/images/new.gif 2215 A /trunk/weka/src/main/java/weka/gui/images/paste.gif 2216 A /trunk/weka/src/main/java/weka/gui/images/print.gif 2217 A /trunk/weka/src/main/java/weka/gui/images/redo.gif 2218 A /trunk/weka/src/main/java/weka/gui/images/run.gif 2219 A /trunk/weka/src/main/java/weka/gui/images/stop.gif 2220 A /trunk/weka/src/main/java/weka/gui/scripting 2221 A /trunk/weka/src/main/java/weka/gui/scripting/FileScriptingPanel.java 2222 A /trunk/weka/src/main/java/weka/gui/scripting/Groovy.props 2223 A /trunk/weka/src/main/java/weka/gui/scripting/GroovyPanel.java 2224 A /trunk/weka/src/main/java/weka/gui/scripting/GroovyScript.java 2225 A /trunk/weka/src/main/java/weka/gui/scripting/Jython.props 2226 A /trunk/weka/src/main/java/weka/gui/scripting/JythonPanel.java 2227 A /trunk/weka/src/main/java/weka/gui/scripting/JythonScript.java 2228 A /trunk/weka/src/main/java/weka/gui/scripting/Script.java 2229 A /trunk/weka/src/main/java/weka/gui/scripting/ScriptUtils.java 2230 A /trunk/weka/src/main/java/weka/gui/scripting/ScriptingPanel.java 2231 A /trunk/weka/src/main/java/weka/gui/scripting/SyntaxDocument.java 2232 A /trunk/weka/src/main/java/weka/gui/scripting/event 2233 A /trunk/weka/src/main/java/weka/gui/scripting/event/ScriptExecutionEvent.java 2234 A /trunk/weka/src/main/java/weka/gui/scripting/event/ScriptExecutionListener.java 2235 A /trunk/weka/src/main/java/weka/gui/scripting/event/TitleUpdatedEvent.java 2236 A /trunk/weka/src/main/java/weka/gui/scripting/event/TitleUpdatedListener.java 2237 A /trunk/weka/src/main/java/weka/gui/scripting/images 2238 A /trunk/weka/src/main/java/weka/gui/scripting/images/groovy_medium.png 2239 A /trunk/weka/src/main/java/weka/gui/scripting/images/groovy_small.png 2240 A /trunk/weka/src/main/java/weka/gui/scripting/images/jython_medium.png 2241 A /trunk/weka/src/main/java/weka/gui/scripting/images/jython_small.png 2242 2243added better support for Jython/Groovy scripting 2244added GUIs with sytnax highlighting for Jython/Groovy scripting 2245SimpleCLI is now based on new scripting framework 2246------------------------------------------------------------------------ 2247r5144 | fracpete | 2009-03-05 17:05:04 +1300 (Thu, 05 Mar 2009) | 4 lines 2248Changed paths: 2249 M /trunk/weka/src/main/java/weka/gui/GUIChooser.java 2250 M /trunk/weka/src/main/java/weka/gui/PropertyDialog.java 2251 M /trunk/weka/src/main/java/weka/gui/scripting/FileScriptingPanel.java 2252 2253fixed minor problems when closing the scripting windows: 2254- GUIChooser: menu item didn't get enabled again (didn't receive a WINDOW_CLOSING event) 2255- Main: closed the whole application (skipped the JInternalFrame when determining the parent frame) 2256added method for determining parent-JInternalFrame to PropertyDialog class 2257------------------------------------------------------------------------ 2258r5147 | eibe | 2009-03-11 11:53:31 +1300 (Wed, 11 Mar 2009) | 1 line 2259Changed paths: 2260 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PolyKernel.java 2261 2262Bernhard's fix for memory leak. 2263------------------------------------------------------------------------ 2264r5148 | mhall | 2009-03-11 12:14:27 +1300 (Wed, 11 Mar 2009) | 1 line 2265Changed paths: 2266 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 2267 2268Now implements RevisionHandler 2269------------------------------------------------------------------------ 2270r5150 | mhall | 2009-03-11 14:39:16 +1300 (Wed, 11 Mar 2009) | 1 line 2271Changed paths: 2272 M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java 2273 2274Fixed bug introduced in r4914, where handling of quoted strings got deleted. 2275------------------------------------------------------------------------ 2276r5152 | mhall | 2009-03-12 11:21:16 +1300 (Thu, 12 Mar 2009) | 1 line 2277Changed paths: 2278 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 2279 2280Added a 200 millisecond delay after a start point is launched (under sequential mode) before the beans are polled to see if any are busy. It is possible that the poll may complete a sweep of the beans before any manage to set their busy flags, and this could cause the next consecutive start point to get launched before the first has completed. 2281------------------------------------------------------------------------ 2282r5154 | mhall | 2009-03-12 14:15:56 +1300 (Thu, 12 Mar 2009) | 1 line 2283Changed paths: 2284 M /trunk/weka/src/main/java/weka/classifiers/mi/supportVector/MIPolyKernel.java 2285 2286Added a clean() method. 2287------------------------------------------------------------------------ 2288r5155 | fracpete | 2009-03-17 13:19:43 +1300 (Tue, 17 Mar 2009) | 2 lines 2289Changed paths: 2290 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Add.java 2291 2292setAttributeName(String) method no longer tries to "fix" the name by checking for single quotes/blanks, but just accepts the name as it is (if empty, "unnamed" is still used, though) 2293added Utils.unbackQuoteChars/backQuoteChars to setOptions/getOptions to correctly escape tabs etc. 2294------------------------------------------------------------------------ 2295r5161 | fracpete | 2009-03-19 09:51:04 +1300 (Thu, 19 Mar 2009) | 3 lines 2296Changed paths: 2297 M /trunk/weka/src/main/java/weka/core/converters/DatabaseSaver.java 2298 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.java 2299 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props 2300 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.hsql 2301 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.msaccess 2302 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver 2303 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver2005 2304 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mysql 2305 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.odbc 2306 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.oracle 2307 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.postgresql 2308 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.sqlite3 2309 2310fixed DatabaseSaver to correctly store date attributes 2311added CREATE_DATE/DateFormat properties to DatabaseUtils.props* files, specifying the columnn type to create for date attributes and what format the date type expects (= SimpleDateFormat format string) 2312DatabaseUtils class now outputs "database driver (JDBC)" instead of "JDBC driver", since users don't seem to be familiar with the JDBC acronym 2313------------------------------------------------------------------------ 2314r5162 | fracpete | 2009-03-19 10:33:54 +1300 (Thu, 19 Mar 2009) | 1 line 2315Changed paths: 2316 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 2317 2318fixed source code generation: generated classifier didn't implement getRevision() method 2319------------------------------------------------------------------------ 2320r5164 | mhall | 2009-03-19 15:41:17 +1300 (Thu, 19 Mar 2009) | 1 line 2321Changed paths: 2322 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2323 2324Fixed bug that prevented Classifier from operating correctly when connected to a TrainTestSplitMaker. 2325------------------------------------------------------------------------ 2326r5165 | mhall | 2009-03-19 16:05:50 +1300 (Thu, 19 Mar 2009) | 1 line 2327Changed paths: 2328 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2329 2330Fixed one other slight problem when connected to a TrainTestSplitMaker. 2331------------------------------------------------------------------------ 2332r5168 | mhall | 2009-03-19 16:52:28 +1300 (Thu, 19 Mar 2009) | 1 line 2333Changed paths: 2334 M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java 2335 2336Removed TechnicalInformationHandler interface and methods. Ridor is not an implementation of the ripple down rules learner discribed in Gaines' Induct paper. 2337------------------------------------------------------------------------ 2338r5171 | mhall | 2009-03-19 16:55:36 +1300 (Thu, 19 Mar 2009) | 1 line 2339Changed paths: 2340 M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java 2341 2342Forgot to update the javadoc. 2343------------------------------------------------------------------------ 2344r5175 | fracpete | 2009-03-23 11:06:49 +1300 (Mon, 23 Mar 2009) | 1 line 2345Changed paths: 2346 M /trunk/weka/src/main/java/weka/gui/GenericArrayEditor.java 2347 2348fixed the "Delete" button: worked from the start of the indices and not from the rear, resulting in indices that no longer existed and throwing exceptions 2349------------------------------------------------------------------------ 2350r5179 | mhall | 2009-03-23 14:08:14 +1300 (Mon, 23 Mar 2009) | 1 line 2351Changed paths: 2352 M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java 2353 2354Random shuffling of the training instances was broken. 2355------------------------------------------------------------------------ 2356r5187 | mhall | 2009-03-24 11:20:55 +1300 (Tue, 24 Mar 2009) | 1 line 2357Changed paths: 2358 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 2359 2360Environment variables were not being set on the flow(s) in some cases. Internal.knowledgeflow.directory was not set correctly. 2361------------------------------------------------------------------------ 2362r5192 | fracpete | 2009-03-24 20:57:16 +1300 (Tue, 24 Mar 2009) | 1 line 2363Changed paths: 2364 M /trunk/weka/src/main/java/weka/associations/Apriori.java 2365 M /trunk/weka/src/main/java/weka/associations/HotSpot.java 2366 2367fixed typo in GPL preamble 2368------------------------------------------------------------------------ 2369r5193 | mhall | 2009-03-25 10:56:26 +1300 (Wed, 25 Mar 2009) | 1 line 2370Changed paths: 2371 M /trunk/weka/src/main/java/weka/classifiers/meta/OrdinalClassClassifier.java 2372 2373Eibe's addition of Schapire's ICML 2002 probability smoothing heuristic. 2374------------------------------------------------------------------------ 2375r5195 | remco | 2009-03-26 14:17:49 +1300 (Thu, 26 Mar 2009) | 1 line 2376Changed paths: 2377 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/local/LocalScoreSearchAlgorithm.java 2378 2379 2380------------------------------------------------------------------------ 2381r5197 | fracpete | 2009-03-30 14:52:13 +1300 (Mon, 30 Mar 2009) | 2 lines 2382Changed paths: 2383 M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java 2384 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output 2385 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction 2386 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/AbstractOutput.java 2387 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/CSV.java 2388 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/HTML.java 2389 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/Null.java 2390 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/PlainText.java 2391 M /trunk/weka/src/main/java/weka/gui/GUIEditors.props 2392 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 2393 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props 2394 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 2395 2396I unified the generation of predictions in Explorer and on command-line by introducing now class hierarchy derived from weka.classifiers.evaluation.output.prediction.AbstractOutput 2397this allows the implementation of custom output generators; initially: PlainText (original format), CSV and HTML 2398------------------------------------------------------------------------ 2399r5198 | mhall | 2009-03-31 14:43:47 +1300 (Tue, 31 Mar 2009) | 1 line 2400Changed paths: 2401 M /trunk/weka/src/main/java/weka/gui/WekaTaskMonitor.java 2402 2403Changed the image loading to retrieve image resources using the current class loader rather than the system class loader. This allows thing to work properly when running in an app server or as an applet. 2404------------------------------------------------------------------------ 2405r5201 | fracpete | 2009-04-02 09:04:45 +1300 (Thu, 02 Apr 2009) | 1 line 2406Changed paths: 2407 M /trunk/weka/src/main/java/weka/gui/scripting/Groovy.props 2408 2409added "assert" to syntax highlighting as keyword 2410------------------------------------------------------------------------ 2411r5202 | fracpete | 2009-04-03 12:01:48 +1300 (Fri, 03 Apr 2009) | 1 line 2412Changed paths: 2413 M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java 2414 2415added option -model <file>/property modelFile to output the internal libsvm to a file (using libsvm's internal format) 2416------------------------------------------------------------------------ 2417r5204 | fracpete | 2009-04-03 12:17:41 +1300 (Fri, 03 Apr 2009) | 1 line 2418Changed paths: 2419 M /trunk/weka/src/main/java/weka/gui/FileEditor.java 2420 2421fixed long-standing issue with FileEditor: one closes the editor now when clicking Select or Cancel 2422------------------------------------------------------------------------ 2423r5208 | remco | 2009-04-05 08:22:13 +1200 (Sun, 05 Apr 2009) | 1 line 2424Changed paths: 2425 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/BayesNetGenerator.java 2426 2427 2428------------------------------------------------------------------------ 2429r5209 | mhall | 2009-04-06 11:39:03 +1200 (Mon, 06 Apr 2009) | 1 line 2430Changed paths: 2431 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 2432 2433Save a bit of memory by creating certain data structures only if needed under the current flow setup. 2434------------------------------------------------------------------------ 2435r5210 | mhall | 2009-04-06 11:40:49 +1200 (Mon, 06 Apr 2009) | 1 line 2436Changed paths: 2437 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.java 2438 M /trunk/weka/src/main/java/weka/gui/explorer/AssociationsPanel.java 2439 M /trunk/weka/src/main/java/weka/gui/explorer/AttributeSelectionPanel.java 2440 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 2441 M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java 2442 M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java 2443 2444Greyed out items are now selectable (so that capabilities, more info etc. can be viewed) but Start/Apply buttons are disabled for schemes that don't meet the capabilities constraints. 2445------------------------------------------------------------------------ 2446r5216 | mhall | 2009-04-07 16:32:35 +1200 (Tue, 07 Apr 2009) | 1 line 2447Changed paths: 2448 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2449 2450Blocking was not preventing test folds from being overwritten. 2451------------------------------------------------------------------------ 2452r5219 | fracpete | 2009-04-08 09:32:11 +1200 (Wed, 08 Apr 2009) | 1 line 2453Changed paths: 2454 M /trunk/weka/src/main/java/weka/core/logging/FileLogger.java 2455 2456added some sanity checks (whether m_LogFile != null) to make subclassing easier 2457------------------------------------------------------------------------ 2458r5223 | mhall | 2009-04-08 15:31:28 +1200 (Wed, 08 Apr 2009) | 1 line 2459Changed paths: 2460 M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java 2461 2462Added a check to make sure the fold thread is not null before checking if it is still alive. 2463------------------------------------------------------------------------ 2464r5224 | mhall | 2009-04-08 15:34:25 +1200 (Wed, 08 Apr 2009) | 1 line 2465Changed paths: 2466 M /trunk/weka/src/main/java/weka/gui/beans/Startable.java 2467 2468Now specifies a method to return a string describing the start action. This allows the KnowledgeFlow to display this in the contextual popup menu for a component. 2469------------------------------------------------------------------------ 2470r5225 | mhall | 2009-04-08 15:37:39 +1200 (Wed, 08 Apr 2009) | 1 line 2471Changed paths: 2472 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 2473 2474Is no longer a userRequestAcceptor. Moved code for resolving environment variables in file names from enumerateRequests() to getStartMessage() 2475------------------------------------------------------------------------ 2476r5226 | mhall | 2009-04-08 15:41:44 +1200 (Wed, 08 Apr 2009) | 1 line 2477Changed paths: 2478 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 2479 2480Now checks to see if a component is Startable and adds it's startMessage to the contextual popup menu. Components that are Startable or implement userRequests get started or requests executed in a separate thread. This should remove the burden of launching computationally expensive tasks in separate threads from individual components (unless, like Classifier, they launch multiple tasks in parallel). 2481------------------------------------------------------------------------ 2482r5227 | mhall | 2009-04-08 15:41:59 +1200 (Wed, 08 Apr 2009) | 1 line 2483Changed paths: 2484 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2485 2486Fixed some more minor concurrency issues. 2487------------------------------------------------------------------------ 2488r5228 | mhall | 2009-04-08 22:09:27 +1200 (Wed, 08 Apr 2009) | 1 line 2489Changed paths: 2490 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2491 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierCustomizer.java 2492 2493Added an option to allow blocking on the last fold of the last run rather than rejecting any further data until processing is completed. 2494------------------------------------------------------------------------ 2495r5234 | mhall | 2009-04-09 12:55:53 +1200 (Thu, 09 Apr 2009) | 1 line 2496Changed paths: 2497 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2498 2499Removed a debugging output. 2500------------------------------------------------------------------------ 2501r5235 | mhall | 2009-04-09 13:00:00 +1200 (Thu, 09 Apr 2009) | 1 line 2502Changed paths: 2503 M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java 2504 2505Added blockOnLastFold property for beans.Classifier. 2506------------------------------------------------------------------------ 2507r5238 | fracpete | 2009-04-13 19:26:46 +1200 (Mon, 13 Apr 2009) | 4 lines 2508Changed paths: 2509 M /trunk/weka/src/main/java/weka/core/converters/DatabaseSaver.java 2510 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.java 2511 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props 2512 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.hsql 2513 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.msaccess 2514 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver 2515 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver2005 2516 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mysql 2517 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.odbc 2518 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.oracle 2519 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.postgresql 2520 M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.sqlite3 2521 2522the DatabaseSaver converter now avoids clashes of table/attribute names with database keywords 2523DatabaseUtils.props received the following two new properties: 2524 Keywords - contains all the keywords 2525 KeywordsMaskChar - the character to mask the keyword, i.e., gets appended 2526------------------------------------------------------------------------ 2527r5241 | mhall | 2009-04-15 12:23:43 +1200 (Wed, 15 Apr 2009) | 1 line 2528Changed paths: 2529 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 2530 2531Now checks the start message of Startable beans and does not launch any that cannot be started (i.e. where the first character of the start message is a $). 2532------------------------------------------------------------------------ 2533r5244 | mhall | 2009-04-15 14:59:06 +1200 (Wed, 15 Apr 2009) | 1 line 2534Changed paths: 2535 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 2536 2537Small fix for handling of Startable and UserRequestAcceptor. 2538------------------------------------------------------------------------ 2539r5245 | fracpete | 2009-04-15 15:10:48 +1200 (Wed, 15 Apr 2009) | 2 lines 2540Changed paths: 2541 A /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/SortLabels.java 2542 A /trunk/weka/src/test/java/weka/filters/unsupervised/attribute/SortLabelsTest.java 2543 2544filter for sorting the labels of nominal attributes 2545current sort options: case-sensitive or case-insensitive 2546------------------------------------------------------------------------ 2547r5246 | mhall | 2009-04-15 15:14:08 +1200 (Wed, 15 Apr 2009) | 1 line 2548Changed paths: 2549 A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationProducer.java 2550 2551Added add and remove listener methods. 2552------------------------------------------------------------------------ 2553r5247 | mhall | 2009-04-15 15:21:22 +1200 (Wed, 15 Apr 2009) | 1 line 2554Changed paths: 2555 M /trunk/weka/src/main/java/weka/gui/beans/Associator.java 2556 M /trunk/weka/src/main/java/weka/gui/beans/AssociatorBeanInfo.java 2557 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2558 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierBeanInfo.java 2559 M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java 2560 M /trunk/weka/src/main/java/weka/gui/beans/ClustererBeanInfo.java 2561 M /trunk/weka/src/main/java/weka/gui/beans/Filter.java 2562 M /trunk/weka/src/main/java/weka/gui/beans/FilterBeanInfo.java 2563 2564Implementation of ConfigurationProducer and related support. 2565------------------------------------------------------------------------ 2566r5254 | mhall | 2009-04-16 09:26:28 +1200 (Thu, 16 Apr 2009) | 1 line 2567Changed paths: 2568 A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationListener.java 2569 2570Initial import 2571------------------------------------------------------------------------ 2572r5255 | mhall | 2009-04-16 09:27:29 +1200 (Thu, 16 Apr 2009) | 1 line 2573Changed paths: 2574 A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationEvent.java 2575 2576Initial import 2577------------------------------------------------------------------------ 2578r5276 | mhall | 2009-04-16 20:25:58 +1200 (Thu, 16 Apr 2009) | 1 line 2579Changed paths: 2580 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2581 2582Now only resets the executor pool on receipt of a run 1, fold 1 training set if it has been shutdown. 2583------------------------------------------------------------------------ 2584r5279 | fracpete | 2009-04-17 10:03:30 +1200 (Fri, 17 Apr 2009) | 1 line 2585Changed paths: 2586 M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java 2587 M /trunk/weka/src/main/java/weka/gui/sql/SqlViewerDialog.java 2588 2589added checkbox to database dialog to enable generation of sparse data 2590------------------------------------------------------------------------ 2591r5281 | eibe | 2009-04-17 11:23:32 +1200 (Fri, 17 Apr 2009) | 1 line 2592Changed paths: 2593 M /trunk/weka/src/main/java/weka/classifiers/IntervalEstimator.java 2594 2595Method renamed because it can predict multiple intervals 2596------------------------------------------------------------------------ 2597r5282 | eibe | 2009-04-17 11:23:59 +1200 (Fri, 17 Apr 2009) | 1 line 2598Changed paths: 2599 M /trunk/weka/src/main/java/weka/classifiers/functions/GaussianProcesses.java 2600 2601Method renamed because it can predict multiple intervals 2602------------------------------------------------------------------------ 2603r5283 | mhall | 2009-04-17 14:59:29 +1200 (Fri, 17 Apr 2009) | 1 line 2604Changed paths: 2605 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java 2606 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java 2607 2608Added an option to allow the relation name of the data used to train the incoming model to be prepended to the file name for the model. 2609------------------------------------------------------------------------ 2610r5284 | mhall | 2009-04-17 14:59:53 +1200 (Fri, 17 Apr 2009) | 1 line 2611Changed paths: 2612 M /trunk/weka/src/main/java/weka/gui/beans/DataVisualizer.java 2613 2614Added a bit of a hack that allows the producer of incoming data events to specify that the DataVisualizer should connect the points with lines by prepending the relation name of the data with '__'. 2615------------------------------------------------------------------------ 2616r5286 | fracpete | 2009-04-18 23:42:24 +1200 (Sat, 18 Apr 2009) | 2 lines 2617Changed paths: 2618 M /trunk/weka/src/main/java/weka/attributeSelection/GeneticSearch.java 2619 2620population size needs to be an even number 2621documentation now states this and set-method only allows even numbers as well 2622------------------------------------------------------------------------ 2623r5289 | eibe | 2009-04-22 12:48:25 +1200 (Wed, 22 Apr 2009) | 1 line 2624Changed paths: 2625 M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java 2626 2627RandomTree is now much faster. Code taken originally from REPTree to avoid re-sorting of data has been removed: it is not beneficial in this case because it sorts *all* attributes before the tree is built; in the new version, only the local data for the randomly selected attributes is sorted. This also means that RandomForest is much faster (it can be as much as an order of magnitude faster on UCI datasets). The memory footprint has also been reduced. RandomTree now also has an option to perform backfitting, so that unbiased probability estimates can be obtained by backfitting a hold-out set. 2628------------------------------------------------------------------------ 2629r5293 | fracpete | 2009-04-23 15:40:07 +1200 (Thu, 23 Apr 2009) | 2 lines 2630Changed paths: 2631 M /trunk/weka/src/main/java/weka/gui/scripting/Groovy.props 2632 M /trunk/weka/src/main/java/weka/gui/scripting/Jython.props 2633 M /trunk/weka/src/main/java/weka/gui/scripting/SyntaxDocument.java 2634 2635SyntaxDocument now supports case-insensitive keywords as well ("CaseSensitive" property) 2636fixed typo in props files ("BlockEndd" instead of "BlockEnd") 2637------------------------------------------------------------------------ 2638r5294 | mhall | 2009-05-04 14:18:21 +1200 (Mon, 04 May 2009) | 1 line 2639Changed paths: 2640 M /trunk/weka/src/main/java/weka/classifiers/trees/SimpleCart.java 2641 2642For numeric split points, a 'clean' split point was being computed by using Math.rint() - this results in a bug where an instance that should be in the left subset actually ends up in the right subset. 2643------------------------------------------------------------------------ 2644r5296 | mhall | 2009-05-04 14:39:26 +1200 (Mon, 04 May 2009) | 1 line 2645Changed paths: 2646 M /trunk/weka/src/main/java/weka/core/AttributeStats.java 2647 M /trunk/weka/src/main/java/weka/core/Instances.java 2648 2649AttributeStats now computes nominal weights as well as counts 2650------------------------------------------------------------------------ 2651r5297 | mhall | 2009-05-04 14:41:48 +1200 (Mon, 04 May 2009) | 1 line 2652Changed paths: 2653 M /trunk/weka/src/main/java/weka/gui/AttributeSummaryPanel.java 2654 M /trunk/weka/src/main/java/weka/gui/AttributeVisualizationPanel.java 2655 M /trunk/weka/src/main/java/weka/gui/InstancesSummaryPanel.java 2656 2657Changes to support displaying of weights information in the PreprocessPanel's summary statistics and histogram 2658------------------------------------------------------------------------ 2659r5298 | mhall | 2009-05-04 14:44:22 +1200 (Mon, 04 May 2009) | 1 line 2660Changed paths: 2661 M /trunk/weka/src/main/java/weka/gui/SetInstancesPanel.java 2662 2663Now allows the client to specify whether zero instances should be shown as 0 or ?. For loaders that can be (and are) used incrementally the number of instances is unknown after the header is read. 2664------------------------------------------------------------------------ 2665r5299 | mhall | 2009-05-04 14:45:40 +1200 (Mon, 04 May 2009) | 1 line 2666Changed paths: 2667 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 2668 2669Changes to support the display of ? for the number of instances when using separate test set evaluation and an incremental loader. 2670------------------------------------------------------------------------ 2671r5300 | mhall | 2009-05-06 14:49:50 +1200 (Wed, 06 May 2009) | 1 line 2672Changed paths: 2673 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2674 2675Small improvement to the checks that the isBusy() method does. 2676------------------------------------------------------------------------ 2677r5305 | mhall | 2009-05-07 16:33:15 +1200 (Thu, 07 May 2009) | 1 line 2678Changed paths: 2679 M /trunk/weka/src/main/java/weka/classifiers/meta/Dagging.java 2680 2681Now randomizes the data and generates splits using Instances.testCV() 2682------------------------------------------------------------------------ 2683r5309 | mhall | 2009-05-08 09:48:43 +1200 (Fri, 08 May 2009) | 1 line 2684Changed paths: 2685 M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java 2686 2687Now makes sure that, when stop() is called and the executor pool is shut down, subsequent batches of data will force the creation of a new executor pool. 2688------------------------------------------------------------------------ 2689r5312 | mhall | 2009-05-08 11:16:07 +1200 (Fri, 08 May 2009) | 1 line 2690Changed paths: 2691 D /trunk/weka/src/main/java/weka/classifiers/misc/MinMaxExtension.java 2692 D /trunk/weka/src/main/java/weka/classifiers/misc/OLM.java 2693 D /trunk/weka/src/main/java/weka/classifiers/misc/OSDL.java 2694 D /trunk/weka/src/main/java/weka/classifiers/misc/monotone 2695 2696Removed - implementation incorrect or unreliable. 2697------------------------------------------------------------------------ 2698r5313 | mhall | 2009-05-08 11:17:12 +1200 (Fri, 08 May 2009) | 1 line 2699Changed paths: 2700 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 2701 2702Updated after the removal of monotone classifiers. 2703------------------------------------------------------------------------ 2704r5318 | mhall | 2009-05-11 10:55:55 +1200 (Mon, 11 May 2009) | 1 line 2705Changed paths: 2706 M /trunk/weka/src/main/java/weka/attributeSelection/WrapperSubsetEval.java 2707 2708Added an option for specifying the evaluation metric to use. Can now choose from mae, f-measure, auc, rmse (probabilities), mae (probabilities) as well as the original error rate and rmse. 2709------------------------------------------------------------------------ 2710r5321 | mhall | 2009-05-11 14:23:51 +1200 (Mon, 11 May 2009) | 1 line 2711Changed paths: 2712 M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java 2713 2714Was outputting relative performance measures - fixed. 2715------------------------------------------------------------------------ 2716r5324 | fracpete | 2009-05-11 23:16:45 +1200 (Mon, 11 May 2009) | 2 lines 2717Changed paths: 2718 M /trunk/weka/src/main/java/weka/gui/sql/ResultSetHelper.java 2719 2720getObject method of the ResultSet returns arrays of bytes in case of Strings, which gets displayed rather ugly in the table. checks now whether the type of the column is a string and explicitly uses the getString method in this case, otherwise the getObject method. 2721also no longer uses the ResultSet's metadata to determine the class, but it's own method (which was only used if the JDBC driver didn't support this function) 2722------------------------------------------------------------------------ 2723r5327 | fracpete | 2009-05-13 10:31:18 +1200 (Wed, 13 May 2009) | 1 line 2724Changed paths: 2725 A /trunk/weka/src/main/java/weka/experiment/ExplicitTestsetResultProducer.java 2726 2727new result producer that allows the usage of explicit test sets (determines the test set based on the relation name of the training set) 2728------------------------------------------------------------------------ 2729r5329 | mhall | 2009-05-13 16:45:15 +1200 (Wed, 13 May 2009) | 1 line 2730Changed paths: 2731 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45Split.java 2732 2733Added a method to return the split value for a split on a numeric attribute. 2734------------------------------------------------------------------------ 2735r5330 | mhall | 2009-05-13 16:45:32 +1200 (Wed, 13 May 2009) | 1 line 2736Changed paths: 2737 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/BinC45Split.java 2738 2739Added a method to return the split value for a split on a numeric attribute. 2740------------------------------------------------------------------------ 2741r5331 | mhall | 2009-05-15 10:12:36 +1200 (Fri, 15 May 2009) | 1 line 2742Changed paths: 2743 M /trunk/weka/src/main/java/weka/gui/boundaryvisualizer/BoundaryVisualizer.java 2744 2745Was not calling GenericObjectEditor.registerEditors(), so property dialogs were missing editors for complex types. 2746------------------------------------------------------------------------ 2747r5333 | mhall | 2009-05-15 10:30:24 +1200 (Fri, 15 May 2009) | 1 line 2748Changed paths: 2749 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/local/TAN.java 2750 2751Now doesn't cause an exception if presented with an empty set of attributes. 2752------------------------------------------------------------------------ 2753r5336 | mhall | 2009-05-17 14:28:02 +1200 (Sun, 17 May 2009) | 1 line 2754Changed paths: 2755 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.java 2756 2757Made the makeCopy() method into a static utility method. 2758------------------------------------------------------------------------ 2759r5340 | mhall | 2009-05-17 15:28:56 +1200 (Sun, 17 May 2009) | 1 line 2760Changed paths: 2761 M /trunk/weka/src/main/java/weka/gui/beans/AssociatorCustomizer.java 2762 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierCustomizer.java 2763 M /trunk/weka/src/main/java/weka/gui/beans/ClustererCustomizer.java 2764 M /trunk/weka/src/main/java/weka/gui/beans/FilterCustomizer.java 2765 2766Made customizers for classifiers, clusterers, filters and associators consistent with OK and Cancel buttons that work as expected 2767------------------------------------------------------------------------ 2768r5346 | fracpete | 2009-05-17 16:14:15 +1200 (Sun, 17 May 2009) | 3 lines 2769Changed paths: 2770 M /trunk/weka/src/main/java/weka/experiment/ResultMatrix.java 2771 M /trunk/weka/src/main/java/weka/experiment/ResultMatrixCSV.java 2772 M /trunk/weka/src/main/java/weka/experiment/ResultMatrixGnuPlot.java 2773 M /trunk/weka/src/main/java/weka/experiment/ResultMatrixHTML.java 2774 M /trunk/weka/src/main/java/weka/experiment/ResultMatrixLatex.java 2775 M /trunk/weka/src/main/java/weka/experiment/ResultMatrixPlainText.java 2776 M /trunk/weka/src/main/java/weka/experiment/ResultMatrixSignificance.java 2777 M /trunk/weka/src/main/java/weka/gui/GUIEditors.props 2778 M /trunk/weka/src/main/java/weka/gui/experiment/Experimenter.props 2779 M /trunk/weka/src/main/java/weka/gui/experiment/ExperimenterDefaults.java 2780 M /trunk/weka/src/main/java/weka/gui/experiment/OutputFormatDialog.java 2781 M /trunk/weka/src/main/java/weka/gui/experiment/ResultsPanel.java 2782 2783ResultMatrix classes are now implementing weka.core.OptionHandler 2784OutputFormatDialog in Experimenter offers direct manipulation of ResultMatrix class instance now, for further tweaking of parameters (e.g., turn off hard cut-off in dataset names) 2785ExperimenterDefaults allow now declaring of options for ResultMatrix class (= OutputFormat), not just classname (other default options still override the ResultMatrix options, though) 2786------------------------------------------------------------------------ 2787r5349 | fracpete | 2009-05-17 16:20:17 +1200 (Sun, 17 May 2009) | 1 line 2788Changed paths: 2789 M /trunk/weka 2790 M /trunk/weka/lib 2791 M /trunk/weka/src 2792 M /trunk/weka/src/main 2793 M /trunk/weka/src/main/java 2794 M /trunk/weka/src/main/java/weka 2795 M /trunk/weka/src/main/java/weka/associations 2796 M /trunk/weka/src/main/java/weka/associations/gsp 2797 M /trunk/weka/src/main/java/weka/associations/tertius 2798 M /trunk/weka/src/main/java/weka/attributeSelection 2799 M /trunk/weka/src/main/java/weka/classifiers 2800 M /trunk/weka/src/main/java/weka/classifiers/bayes 2801 M /trunk/weka/src/main/java/weka/classifiers/bayes/blr 2802 M /trunk/weka/src/main/java/weka/classifiers/bayes/net 2803 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/estimate 2804 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons 2805 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search 2806 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/ci 2807 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/fixed 2808 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/global 2809 M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/local 2810 M /trunk/weka/src/main/java/weka/classifiers/evaluation 2811 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output 2812 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction 2813 M /trunk/weka/src/main/java/weka/classifiers/functions 2814 M /trunk/weka/src/main/java/weka/classifiers/functions/neural 2815 M /trunk/weka/src/main/java/weka/classifiers/functions/pace 2816 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector 2817 M /trunk/weka/src/main/java/weka/classifiers/lazy 2818 M /trunk/weka/src/main/java/weka/classifiers/lazy/kstar 2819 M /trunk/weka/src/main/java/weka/classifiers/meta 2820 M /trunk/weka/src/main/java/weka/classifiers/meta/ensembleSelection 2821 M /trunk/weka/src/main/java/weka/classifiers/meta/nestedDichotomies 2822 M /trunk/weka/src/main/java/weka/classifiers/mi 2823 M /trunk/weka/src/main/java/weka/classifiers/mi/supportVector 2824 M /trunk/weka/src/main/java/weka/classifiers/misc 2825 M /trunk/weka/src/main/java/weka/classifiers/pmml 2826 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer 2827 M /trunk/weka/src/main/java/weka/classifiers/rules 2828 M /trunk/weka/src/main/java/weka/classifiers/rules/part 2829 M /trunk/weka/src/main/java/weka/classifiers/scripting 2830 M /trunk/weka/src/main/java/weka/classifiers/trees 2831 M /trunk/weka/src/main/java/weka/classifiers/trees/adtree 2832 M /trunk/weka/src/main/java/weka/classifiers/trees/ft 2833 M /trunk/weka/src/main/java/weka/classifiers/trees/j48 2834 M /trunk/weka/src/main/java/weka/classifiers/trees/lmt 2835 M /trunk/weka/src/main/java/weka/classifiers/trees/m5 2836 M /trunk/weka/src/main/java/weka/classifiers/xml 2837 M /trunk/weka/src/main/java/weka/clusterers 2838 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan 2839 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/DataObjects 2840 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/Databases 2841 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI 2842 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI/Graphics 2843 M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/Utils 2844 M /trunk/weka/src/main/java/weka/core 2845 M /trunk/weka/src/main/java/weka/core/converters 2846 M /trunk/weka/src/main/java/weka/core/logging 2847 M /trunk/weka/src/main/java/weka/core/mathematicalexpression 2848 M /trunk/weka/src/main/java/weka/core/matrix 2849 M /trunk/weka/src/main/java/weka/core/neighboursearch 2850 M /trunk/weka/src/main/java/weka/core/neighboursearch/balltrees 2851 M /trunk/weka/src/main/java/weka/core/neighboursearch/covertrees 2852 M /trunk/weka/src/main/java/weka/core/neighboursearch/kdtrees 2853 M /trunk/weka/src/main/java/weka/core/pmml 2854 M /trunk/weka/src/main/java/weka/core/scripting 2855 M /trunk/weka/src/main/java/weka/core/stemmers 2856 M /trunk/weka/src/main/java/weka/core/tokenizers 2857 M /trunk/weka/src/main/java/weka/core/xml 2858 M /trunk/weka/src/main/java/weka/datagenerators 2859 M /trunk/weka/src/main/java/weka/datagenerators/classifiers 2860 M /trunk/weka/src/main/java/weka/datagenerators/classifiers/classification 2861 M /trunk/weka/src/main/java/weka/datagenerators/classifiers/regression 2862 M /trunk/weka/src/main/java/weka/datagenerators/clusterers 2863 M /trunk/weka/src/main/java/weka/estimators 2864 M /trunk/weka/src/main/java/weka/experiment 2865 M /trunk/weka/src/main/java/weka/experiment/xml 2866 M /trunk/weka/src/main/java/weka/filters 2867 M /trunk/weka/src/main/java/weka/filters/supervised 2868 M /trunk/weka/src/main/java/weka/filters/supervised/attribute 2869 M /trunk/weka/src/main/java/weka/filters/supervised/instance 2870 M /trunk/weka/src/main/java/weka/filters/unsupervised 2871 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute 2872 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance 2873 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression 2874 M /trunk/weka/src/main/java/weka/gui 2875 M /trunk/weka/src/main/java/weka/gui/arffviewer 2876 M /trunk/weka/src/main/java/weka/gui/beans 2877 M /trunk/weka/src/main/java/weka/gui/beans/icons 2878 M /trunk/weka/src/main/java/weka/gui/beans/xml 2879 M /trunk/weka/src/main/java/weka/gui/boundaryvisualizer 2880 M /trunk/weka/src/main/java/weka/gui/ensembleLibraryEditor 2881 M /trunk/weka/src/main/java/weka/gui/ensembleLibraryEditor/tree 2882 M /trunk/weka/src/main/java/weka/gui/experiment 2883 M /trunk/weka/src/main/java/weka/gui/explorer 2884 M /trunk/weka/src/main/java/weka/gui/graphvisualizer 2885 M /trunk/weka/src/main/java/weka/gui/graphvisualizer/icons 2886 M /trunk/weka/src/main/java/weka/gui/images 2887 M /trunk/weka/src/main/java/weka/gui/scripting 2888 M /trunk/weka/src/main/java/weka/gui/scripting/event 2889 M /trunk/weka/src/main/java/weka/gui/scripting/images 2890 M /trunk/weka/src/main/java/weka/gui/sql 2891 M /trunk/weka/src/main/java/weka/gui/sql/event 2892 M /trunk/weka/src/main/java/weka/gui/streams 2893 M /trunk/weka/src/main/java/weka/gui/treevisualizer 2894 M /trunk/weka/src/main/java/weka/gui/visualize 2895 M /trunk/weka/src/main/java/weka/gui/visualize/plugins 2896 M /trunk/weka/src/test 2897 M /trunk/weka/src/test/java 2898 M /trunk/weka/src/test/java/weka 2899 M /trunk/weka/src/test/java/weka/associations 2900 M /trunk/weka/src/test/java/weka/attributeSelection 2901 M /trunk/weka/src/test/java/weka/classifiers 2902 M /trunk/weka/src/test/java/weka/classifiers/bayes 2903 M /trunk/weka/src/test/java/weka/classifiers/data 2904 M /trunk/weka/src/test/java/weka/classifiers/functions 2905 M /trunk/weka/src/test/java/weka/classifiers/functions/supportVector 2906 M /trunk/weka/src/test/java/weka/classifiers/lazy 2907 M /trunk/weka/src/test/java/weka/classifiers/meta 2908 M /trunk/weka/src/test/java/weka/classifiers/meta/nestedDichotomies 2909 M /trunk/weka/src/test/java/weka/classifiers/mi 2910 M /trunk/weka/src/test/java/weka/classifiers/mi/supportVector 2911 M /trunk/weka/src/test/java/weka/classifiers/misc 2912 M /trunk/weka/src/test/java/weka/classifiers/pmml 2913 M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer 2914 M /trunk/weka/src/test/java/weka/classifiers/pmml/data 2915 M /trunk/weka/src/test/java/weka/classifiers/rules 2916 M /trunk/weka/src/test/java/weka/classifiers/trees 2917 M /trunk/weka/src/test/java/weka/clusterers 2918 M /trunk/weka/src/test/java/weka/core 2919 M /trunk/weka/src/test/java/weka/core/converters 2920 M /trunk/weka/src/test/java/weka/core/neighboursearch 2921 M /trunk/weka/src/test/java/weka/core/tokenizers 2922 M /trunk/weka/src/test/java/weka/datagenerators 2923 M /trunk/weka/src/test/java/weka/datagenerators/classifiers 2924 M /trunk/weka/src/test/java/weka/datagenerators/classifiers/classification 2925 M /trunk/weka/src/test/java/weka/datagenerators/classifiers/regression 2926 M /trunk/weka/src/test/java/weka/datagenerators/clusterers 2927 M /trunk/weka/src/test/java/weka/filters 2928 M /trunk/weka/src/test/java/weka/filters/data 2929 M /trunk/weka/src/test/java/weka/filters/supervised 2930 M /trunk/weka/src/test/java/weka/filters/supervised/attribute 2931 M /trunk/weka/src/test/java/weka/filters/supervised/instance 2932 M /trunk/weka/src/test/java/weka/filters/unsupervised 2933 M /trunk/weka/src/test/java/weka/filters/unsupervised/attribute 2934 M /trunk/weka/src/test/java/weka/filters/unsupervised/instance 2935 M /trunk/weka/src/test/java/weka/test 2936 M /trunk/weka/src/test/resources 2937 M /trunk/weka/src/test/resources/wekarefs 2938 M /trunk/weka/src/test/resources/wekarefs/weka 2939 M /trunk/weka/src/test/resources/wekarefs/weka/associations 2940 M /trunk/weka/src/test/resources/wekarefs/weka/attributeSelection 2941 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers 2942 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/bayes 2943 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/functions 2944 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/functions/supportVector 2945 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/lazy 2946 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/meta 2947 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/meta/nestedDichotomies 2948 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/mi 2949 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/mi/supportVector 2950 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/misc 2951 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/pmml 2952 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/pmml/consumer 2953 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/rules 2954 M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/trees 2955 M /trunk/weka/src/test/resources/wekarefs/weka/clusterers 2956 M /trunk/weka/src/test/resources/wekarefs/weka/core 2957 M /trunk/weka/src/test/resources/wekarefs/weka/core/neighboursearch 2958 M /trunk/weka/src/test/resources/wekarefs/weka/core/tokenizers 2959 M /trunk/weka/src/test/resources/wekarefs/weka/filters 2960 M /trunk/weka/src/test/resources/wekarefs/weka/filters/supervised 2961 M /trunk/weka/src/test/resources/wekarefs/weka/filters/supervised/attribute 2962 M /trunk/weka/src/test/resources/wekarefs/weka/filters/supervised/instance 2963 M /trunk/weka/src/test/resources/wekarefs/weka/filters/unsupervised 2964 M /trunk/weka/src/test/resources/wekarefs/weka/filters/unsupervised/attribute 2965 M /trunk/weka/src/test/resources/wekarefs/weka/filters/unsupervised/instance 2966 2967updated ignore patterns 2968------------------------------------------------------------------------ 2969r5353 | fracpete | 2009-05-18 09:56:20 +1200 (Mon, 18 May 2009) | 1 line 2970Changed paths: 2971 M /trunk/weka/src/main/java/weka/experiment/ExplicitTestsetResultProducer.java 2972 2973fixed typo in listOptions() (and therefore Javadoc) 2974------------------------------------------------------------------------ 2975r5358 | fracpete | 2009-05-19 11:26:09 +1200 (Tue, 19 May 2009) | 2 lines 2976Changed paths: 2977 M /trunk/weka/src/main/java/weka/core/Instances.java 2978 M /trunk/weka/src/main/java/weka/gui/SimpleCLIPanel.java 2979 2980removed System.exit(1) call from weka.core.Instances (bad if run from SimpleCLI) 2981SimpleCLI's ClassRunner class now trims the string array used as command-line arguments for the class's main method that is about to be executed after removing the "> file" bits (weka.core.Instances didn't like the additional two empty strings and just exited) 2982------------------------------------------------------------------------ 2983r5359 | mhall | 2009-05-19 14:17:56 +1200 (Tue, 19 May 2009) | 1 line 2984Changed paths: 2985 M /trunk/weka/src/main/java/weka/core/RandomVariates.java 2986 2987Amri's fix for negative values in nextGamma(). 2988------------------------------------------------------------------------ 2989r5367 | fracpete | 2009-05-20 10:55:29 +1200 (Wed, 20 May 2009) | 1 line 2990Changed paths: 2991 M /trunk/weka/src/main/java/weka/gui/experiment/Experimenter.props 2992 M /trunk/weka/src/main/java/weka/gui/experiment/ExperimenterDefaults.java 2993 2994added correct setup for ResultMatrixPlainText as default output format 2995------------------------------------------------------------------------ 2996r5368 | mhall | 2009-05-20 14:00:12 +1200 (Wed, 20 May 2009) | 1 line 2997Changed paths: 2998 M /trunk/weka/src/main/java/weka/core/Environment.java 2999 3000Fixed a bug that caused an infinite loop in substitute(). Now uses a TreeMap instead of a HashMap so that keys are kept in sorted order. 3001------------------------------------------------------------------------ 3002r5371 | mhall | 2009-05-20 15:53:56 +1200 (Wed, 20 May 2009) | 1 line 3003Changed paths: 3004 A /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java 3005 3006Initial import 3007------------------------------------------------------------------------ 3008r5373 | mhall | 2009-05-21 11:38:27 +1200 (Thu, 21 May 2009) | 1 line 3009Changed paths: 3010 A /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/EMImputation.java 3011 3012Initial import of Amri Napolitano's EM-based missing values imputation filter 3013------------------------------------------------------------------------ 3014r5378 | fracpete | 2009-05-21 14:27:11 +1200 (Thu, 21 May 2009) | 1 line 3015Changed paths: 3016 M /trunk/weka/src/main/java/weka/core/ClassDiscovery.java 3017 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.java 3018 3019skips duplicate class names now 3020------------------------------------------------------------------------ 3021r5380 | mhall | 2009-05-21 16:12:41 +1200 (Thu, 21 May 2009) | 1 line 3022Changed paths: 3023 M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java 3024 3025Added some more constructors. 3026------------------------------------------------------------------------ 3027r5382 | mhall | 2009-05-22 14:00:11 +1200 (Fri, 22 May 2009) | 1 line 3028Changed paths: 3029 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 3030 3031Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel. 3032------------------------------------------------------------------------ 3033r5383 | mhall | 2009-05-22 14:00:28 +1200 (Fri, 22 May 2009) | 1 line 3034Changed paths: 3035 M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java 3036 3037Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel. 3038------------------------------------------------------------------------ 3039r5384 | mhall | 2009-05-22 14:00:49 +1200 (Fri, 22 May 2009) | 1 line 3040Changed paths: 3041 M /trunk/weka/src/main/java/weka/gui/explorer/AssociationsPanel.java 3042 3043Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel. 3044------------------------------------------------------------------------ 3045r5385 | mhall | 2009-05-22 14:01:04 +1200 (Fri, 22 May 2009) | 1 line 3046Changed paths: 3047 M /trunk/weka/src/main/java/weka/gui/explorer/AttributeSelectionPanel.java 3048 3049Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel. 3050------------------------------------------------------------------------ 3051r5394 | mhall | 2009-05-25 10:25:29 +1200 (Mon, 25 May 2009) | 1 line 3052Changed paths: 3053 M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java 3054 3055Added setEnabled and setEditable methods that directly affect the combo box. 3056------------------------------------------------------------------------ 3057r5396 | mhall | 2009-05-25 16:54:56 +1200 (Mon, 25 May 2009) | 1 line 3058Changed paths: 3059 M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java 3060 M /trunk/weka/src/main/java/weka/gui/beans/Loader.java 3061 M /trunk/weka/src/main/java/weka/gui/beans/LoaderCustomizer.java 3062 M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java 3063 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java 3064 3065Modifications to support GUI access to environment variables. 3066------------------------------------------------------------------------ 3067r5398 | mhall | 2009-05-26 12:25:22 +1200 (Tue, 26 May 2009) | 1 line 3068Changed paths: 3069 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 3070 3071Added EMImputation 3072------------------------------------------------------------------------ 3073r5399 | fracpete | 2009-05-26 12:52:42 +1200 (Tue, 26 May 2009) | 1 line 3074Changed paths: 3075 M /trunk/weka/src/main/java/weka/experiment/Experiment.java 3076 M /trunk/weka/src/main/java/weka/gui/experiment/SetupPanel.java 3077 M /trunk/weka/src/main/java/weka/gui/experiment/SimpleSetupPanel.java 3078 3079moved reading/writing of experiments into weka.experiment.Experiment class (reducing duplicate code) 3080------------------------------------------------------------------------ 3081r5402 | mhall | 2009-05-26 14:04:05 +1200 (Tue, 26 May 2009) | 1 line 3082Changed paths: 3083 M /trunk/weka/src/main/java/weka/classifiers/functions/MultilayerPerceptron.java 3084 M /trunk/weka/src/main/java/weka/classifiers/functions/neural/NeuralConnection.java 3085 M /trunk/weka/src/main/java/weka/classifiers/functions/neural/NeuralNode.java 3086 3087When using a validation set to stop training, the weights from the last iteration performed were getting used instead of the weights corresponding to the minimal error on the validation set. 3088------------------------------------------------------------------------ 3089r5406 | mhall | 2009-05-26 15:10:28 +1200 (Tue, 26 May 2009) | 1 line 3090Changed paths: 3091 M /trunk/weka/src/main/java/weka/gui/beans/LoaderCustomizer.java 3092 M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java 3093 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java 3094 3095Minor changes to layout and resizing behaviour 3096------------------------------------------------------------------------ 3097r5408 | mhall | 2009-05-26 15:16:23 +1200 (Tue, 26 May 2009) | 1 line 3098Changed paths: 3099 M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java 3100 3101Another small improvement to layout. 3102------------------------------------------------------------------------ 3103r5413 | fracpete | 2009-05-27 09:33:03 +1200 (Wed, 27 May 2009) | 1 line 3104Changed paths: 3105 M /trunk/weka/src/main/java/weka/gui/GUIEditors.props 3106 3107added weka.experiment.Tester 3108------------------------------------------------------------------------ 3109r5415 | fracpete | 2009-05-27 09:35:20 +1200 (Wed, 27 May 2009) | 1 line 3110Changed paths: 3111 M /trunk/weka/src/main/java/weka/experiment/PairedTTester.java 3112 3113inner classes are now serializable 3114------------------------------------------------------------------------ 3115r5417 | fracpete | 2009-05-27 09:57:45 +1200 (Wed, 27 May 2009) | 2 lines 3116Changed paths: 3117 M /trunk/weka/src/main/java/weka/core/converters/ConverterUtils.java 3118 A /trunk/weka/src/main/java/weka/core/converters/MatlabLoader.java 3119 A /trunk/weka/src/main/java/weka/core/converters/MatlabSaver.java 3120 3121added converters for Matlab's ASCII file format (containing a single matrix, either in single or double precision, tabs/blanks separated) - tested with Matlab 7.6 3122added Matlab/SVMLight converters to core converter lists in ConverterUtils class 3123------------------------------------------------------------------------ 3124r5421 | mhall | 2009-05-27 11:02:32 +1200 (Wed, 27 May 2009) | 1 line 3125Changed paths: 3126 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 3127 3128Added the matlab loader and saver 3129------------------------------------------------------------------------ 3130r5423 | mhall | 2009-05-27 12:10:14 +1200 (Wed, 27 May 2009) | 1 line 3131Changed paths: 3132 M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java 3133 M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java 3134 3135More layout tweaks 3136------------------------------------------------------------------------ 3137r5425 | mhall | 2009-05-27 14:28:48 +1200 (Wed, 27 May 2009) | 1 line 3138Changed paths: 3139 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props 3140 3141Now checks the current classloader against the system classloader and returns false from useDynamic() if they are not equal. This ensures that the static GOE.props are used in systems that use a custom classloader. 3142------------------------------------------------------------------------ 3143r5426 | mhall | 2009-05-27 14:29:09 +1200 (Wed, 27 May 2009) | 1 line 3144Changed paths: 3145 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.java 3146 3147Now checks the current classloader against the system classloader and returns false from useDynamic() if they are not equal. This ensures that the static GOE.props are used in systems that use a custom classloader. 3148------------------------------------------------------------------------ 3149r5430 | mhall | 2009-05-27 14:52:08 +1200 (Wed, 27 May 2009) | 1 line 3150Changed paths: 3151 M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.java 3152 3153Now outputs a message to the console if dynamic classloading can't be used due to non-system classloader. 3154------------------------------------------------------------------------ 3155r5433 | mhall | 2009-05-27 15:32:47 +1200 (Wed, 27 May 2009) | 1 line 3156Changed paths: 3157 D /trunk/weka/src/main/java/weka/classifiers/functions/SVMreg.java 3158 3159Renamed to SMOreg; original SMOreg deleted. 3160------------------------------------------------------------------------ 3161r5434 | mhall | 2009-05-27 15:34:15 +1200 (Wed, 27 May 2009) | 1 line 3162Changed paths: 3163 M /trunk/weka/src/main/java/weka/classifiers/functions/SMOreg.java 3164 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/RegOptimizer.java 3165 3166Replaced by Remco's SVMreg. RegOptimizer updated to reflect the name change. 3167------------------------------------------------------------------------ 3168r5437 | mhall | 2009-05-27 15:38:50 +1200 (Wed, 27 May 2009) | 1 line 3169Changed paths: 3170 M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props 3171 3172Updated to reflect the renaming of SVMreg to SMOreg. 3173------------------------------------------------------------------------ 3174r5443 | mhall | 2009-05-28 16:06:00 +1200 (Thu, 28 May 2009) | 1 line 3175Changed paths: 3176 M /trunk/weka/src/main/java/weka/core/Capabilities.java 3177 3178Added enableAll and disableAll methods. 3179------------------------------------------------------------------------ 3180r5444 | mhall | 2009-05-28 16:24:29 +1200 (Thu, 28 May 2009) | 1 line 3181Changed paths: 3182 M /trunk/weka/src/main/java/weka/associations/Apriori.java 3183 M /trunk/weka/src/main/java/weka/associations/FilteredAssociator.java 3184 M /trunk/weka/src/main/java/weka/associations/GeneralizedSequentialPatterns.java 3185 M /trunk/weka/src/main/java/weka/associations/HotSpot.java 3186 M /trunk/weka/src/main/java/weka/associations/PredictiveApriori.java 3187 M /trunk/weka/src/main/java/weka/associations/Tertius.java 3188 3189getCapabilities() now disables all capabilities before enabling individual ones. 3190------------------------------------------------------------------------ 3191r5445 | mhall | 2009-05-28 16:25:07 +1200 (Thu, 28 May 2009) | 1 line 3192Changed paths: 3193 M /trunk/weka/src/main/java/weka/associations/AbstractAssociator.java 3194 3195Now has maximally permissive capabilities as default. 3196------------------------------------------------------------------------ 3197r5446 | mhall | 2009-05-28 16:38:39 +1200 (Thu, 28 May 2009) | 1 line 3198Changed paths: 3199 M /trunk/weka/src/main/java/weka/attributeSelection/ASEvaluation.java 3200 3201Now has maximally permissive capabilities as default. 3202------------------------------------------------------------------------ 3203r5447 | mhall | 2009-05-28 16:41:44 +1200 (Thu, 28 May 2009) | 1 line 3204Changed paths: 3205 M /trunk/weka/src/main/java/weka/attributeSelection/CfsSubsetEval.java 3206 M /trunk/weka/src/main/java/weka/attributeSelection/ChiSquaredAttributeEval.java 3207 M /trunk/weka/src/main/java/weka/attributeSelection/ClassifierSubsetEval.java 3208 M /trunk/weka/src/main/java/weka/attributeSelection/ConsistencySubsetEval.java 3209 M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveASEvaluation.java 3210 M /trunk/weka/src/main/java/weka/attributeSelection/FilteredAttributeEval.java 3211 M /trunk/weka/src/main/java/weka/attributeSelection/FilteredSubsetEval.java 3212 M /trunk/weka/src/main/java/weka/attributeSelection/GainRatioAttributeEval.java 3213 M /trunk/weka/src/main/java/weka/attributeSelection/InfoGainAttributeEval.java 3214 M /trunk/weka/src/main/java/weka/attributeSelection/LatentSemanticAnalysis.java 3215 M /trunk/weka/src/main/java/weka/attributeSelection/OneRAttributeEval.java 3216 M /trunk/weka/src/main/java/weka/attributeSelection/PrincipalComponents.java 3217 M /trunk/weka/src/main/java/weka/attributeSelection/ReliefFAttributeEval.java 3218 M /trunk/weka/src/main/java/weka/attributeSelection/SignificanceAttributeEval.java 3219 M /trunk/weka/src/main/java/weka/attributeSelection/SymmetricalUncertAttributeEval.java 3220 M /trunk/weka/src/main/java/weka/attributeSelection/SymmetricalUncertAttributeSetEval.java 3221 M /trunk/weka/src/main/java/weka/attributeSelection/WrapperSubsetEval.java 3222 3223getCapabilities() now disables all capabilities before enabling individual ones. 3224------------------------------------------------------------------------ 3225r5448 | mhall | 2009-05-29 15:12:00 +1200 (Fri, 29 May 2009) | 1 line 3226Changed paths: 3227 M /trunk/weka/src/main/java/weka/classifiers/bayes/AODE.java 3228 M /trunk/weka/src/main/java/weka/classifiers/bayes/AODEsr.java 3229 M /trunk/weka/src/main/java/weka/classifiers/bayes/BayesNet.java 3230 M /trunk/weka/src/main/java/weka/classifiers/bayes/BayesianLogisticRegression.java 3231 M /trunk/weka/src/main/java/weka/classifiers/bayes/ComplementNaiveBayes.java 3232 M /trunk/weka/src/main/java/weka/classifiers/bayes/DMNBtext.java 3233 M /trunk/weka/src/main/java/weka/classifiers/bayes/HNB.java 3234 M /trunk/weka/src/main/java/weka/classifiers/bayes/NaiveBayes.java 3235 M /trunk/weka/src/main/java/weka/classifiers/bayes/NaiveBayesMultinomial.java 3236 M /trunk/weka/src/main/java/weka/classifiers/bayes/NaiveBayesSimple.java 3237 M /trunk/weka/src/main/java/weka/classifiers/bayes/WAODE.java 3238 3239getCapabilities() now disables all capabilities before enabling individual ones. 3240------------------------------------------------------------------------ 3241r5449 | mhall | 2009-05-29 15:35:25 +1200 (Fri, 29 May 2009) | 1 line 3242Changed paths: 3243 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/Kernel.java 3244 3245Now has maximally permissive capabilities as default and default implementation of RevisionHandler. 3246------------------------------------------------------------------------ 3247r5450 | mhall | 2009-05-29 15:35:55 +1200 (Fri, 29 May 2009) | 1 line 3248Changed paths: 3249 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PolyKernel.java 3250 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PrecomputedKernelMatrixKernel.java 3251 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/Puk.java 3252 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/RBFKernel.java 3253 M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/StringKernel.java 3254 3255getCapabilities() now disables all capabilities before enabling individual ones. 3256------------------------------------------------------------------------ 3257r5451 | mhall | 2009-05-29 15:37:31 +1200 (Fri, 29 May 2009) | 1 line 3258Changed paths: 3259 M /trunk/weka/src/main/java/weka/classifiers/functions/IsotonicRegression.java 3260 M /trunk/weka/src/main/java/weka/classifiers/functions/LeastMedSq.java 3261 M /trunk/weka/src/main/java/weka/classifiers/functions/LibLINEAR.java 3262 M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java 3263 M /trunk/weka/src/main/java/weka/classifiers/functions/LinearRegression.java 3264 M /trunk/weka/src/main/java/weka/classifiers/functions/Logistic.java 3265 M /trunk/weka/src/main/java/weka/classifiers/functions/MultilayerPerceptron.java 3266 M /trunk/weka/src/main/java/weka/classifiers/functions/PLSClassifier.java 3267 M /trunk/weka/src/main/java/weka/classifiers/functions/PaceRegression.java 3268 M /trunk/weka/src/main/java/weka/classifiers/functions/SimpleLinearRegression.java 3269 M /trunk/weka/src/main/java/weka/classifiers/functions/SimpleLogistic.java 3270 M /trunk/weka/src/main/java/weka/classifiers/functions/VotedPerceptron.java 3271 M /trunk/weka/src/main/java/weka/classifiers/functions/Winnow.java 3272 3273getCapabilities() now disables all capabilities before enabling individual ones. 3274------------------------------------------------------------------------ 3275r5452 | mhall | 2009-05-29 15:43:07 +1200 (Fri, 29 May 2009) | 1 line 3276Changed paths: 3277 M /trunk/weka/src/main/java/weka/classifiers/lazy/IB1.java 3278 M /trunk/weka/src/main/java/weka/classifiers/lazy/IBk.java 3279 M /trunk/weka/src/main/java/weka/classifiers/lazy/KStar.java 3280 M /trunk/weka/src/main/java/weka/classifiers/lazy/LBR.java 3281 M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java 3282 3283getCapabilities() now disables all capabilities before enabling individual ones. 3284------------------------------------------------------------------------ 3285r5453 | fracpete | 2009-05-31 15:24:43 +1200 (Sun, 31 May 2009) | 2 lines 3286Changed paths: 3287 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/AbstractOutput.java 3288 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/CSV.java 3289 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/HTML.java 3290 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/PlainText.java 3291 3292added option "-decimals" to output generators, to tweak the number of digits output after the decimals 3293fixed slight bugs in CSV output (no delimiter between "error" and "prediction", trailing delimiter if no additional attributes to output) 3294------------------------------------------------------------------------ 3295r5463 | mhall | 2009-05-31 18:20:09 +1200 (Sun, 31 May 2009) | 1 line 3296Changed paths: 3297 M /trunk/weka/src/main/java/weka/classifiers/functions/PLSClassifier.java 3298 3299Didn't need to disable before enabling capabilities in this classifier. 3300------------------------------------------------------------------------ 3301r5466 | fracpete | 2009-06-01 15:48:51 +1200 (Mon, 01 Jun 2009) | 3 lines 3302Changed paths: 3303 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/AbstractOutput.java 3304 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/CSV.java 3305 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/HTML.java 3306 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/Null.java 3307 M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/PlainText.java 3308 A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/XML.java 3309 M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java 3310 3311added prediction output generator for outputting simple XML 3312prediction generators can now output to files as well (and in that case suppress the regular output) 3313the Explorer now suppresses the output of the prediction generators if they suppress the regular output and only output to a file 3314------------------------------------------------------------------------ 3315r5474 | mhall | 2009-06-02 10:26:24 +1200 (Tue, 02 Jun 2009) | 1 line 3316Changed paths: 3317 M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java 3318 3319Evaluation object was getting initialized with the test set rather than the training set (screwed up relative metrics). Fixed. Now checks for empty training set and initializes with test set and useNoPriors in this case. 3320------------------------------------------------------------------------ 3321r5478 | mhall | 2009-06-02 10:49:15 +1200 (Tue, 02 Jun 2009) | 1 line 3322Changed paths: 3323 M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java 3324 3325More layout tweaks 3326------------------------------------------------------------------------ 3327r5480 | mhall | 2009-06-02 11:56:39 +1200 (Tue, 02 Jun 2009) | 1 line 3328Changed paths: 3329 M /trunk/weka/src/main/java/weka/classifiers/meta/EnsembleSelection.java 3330 3331getCapabilities() now disables all capabilities before enabling individual ones. 3332------------------------------------------------------------------------ 3333r5481 | mhall | 2009-06-02 12:09:24 +1200 (Tue, 02 Jun 2009) | 1 line 3334Changed paths: 3335 M /trunk/weka/src/main/java/weka/classifiers/mi/CitationKNN.java 3336 M /trunk/weka/src/main/java/weka/classifiers/mi/MDD.java 3337 M /trunk/weka/src/main/java/weka/classifiers/mi/MIDD.java 3338 M /trunk/weka/src/main/java/weka/classifiers/mi/MIEMDD.java 3339 M /trunk/weka/src/main/java/weka/classifiers/mi/MILR.java 3340 M /trunk/weka/src/main/java/weka/classifiers/mi/MINND.java 3341 M /trunk/weka/src/main/java/weka/classifiers/mi/MIOptimalBall.java 3342 M /trunk/weka/src/main/java/weka/classifiers/mi/MISVM.java 3343 M /trunk/weka/src/main/java/weka/classifiers/mi/TLD.java 3344 M /trunk/weka/src/main/java/weka/classifiers/mi/TLDSimple.java 3345 3346getCapabilities() now disables all capabilities before enabling individual ones. 3347------------------------------------------------------------------------ 3348r5482 | mhall | 2009-06-02 12:13:28 +1200 (Tue, 02 Jun 2009) | 1 line 3349Changed paths: 3350 M /trunk/weka/src/main/java/weka/classifiers/misc/FLR.java 3351 M /trunk/weka/src/main/java/weka/classifiers/misc/HyperPipes.java 3352 M /trunk/weka/src/main/java/weka/classifiers/misc/SerializedClassifier.java 3353 M /trunk/weka/src/main/java/weka/classifiers/misc/VFI.java 3354 3355getCapabilities() now disables all capabilities before enabling individual ones. 3356------------------------------------------------------------------------ 3357r5483 | mhall | 2009-06-02 13:48:43 +1200 (Tue, 02 Jun 2009) | 1 line 3358Changed paths: 3359 M /trunk/weka/src/main/java/weka/classifiers/rules/ConjunctiveRule.java 3360 M /trunk/weka/src/main/java/weka/classifiers/rules/DecisionTable.java 3361 M /trunk/weka/src/main/java/weka/classifiers/rules/JRip.java 3362 M /trunk/weka/src/main/java/weka/classifiers/rules/NNge.java 3363 M /trunk/weka/src/main/java/weka/classifiers/rules/OneR.java 3364 M /trunk/weka/src/main/java/weka/classifiers/rules/Prism.java 3365 M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java 3366 M /trunk/weka/src/main/java/weka/classifiers/rules/ZeroR.java 3367 M /trunk/weka/src/main/java/weka/classifiers/rules/part/MakeDecList.java 3368 3369getCapabilities() now disables all capabilities before enabling individual ones. 3370------------------------------------------------------------------------ 3371r5484 | mhall | 2009-06-02 13:50:25 +1200 (Tue, 02 Jun 2009) | 1 line 3372Changed paths: 3373 M /trunk/weka/src/main/java/weka/classifiers/scripting/GroovyClassifier.java 3374 M /trunk/weka/src/main/java/weka/classifiers/scripting/JythonClassifier.java 3375 3376getCapabilities() now disables all capabilities before enabling individual ones. 3377------------------------------------------------------------------------ 3378r5485 | mhall | 2009-06-02 14:52:11 +1200 (Tue, 02 Jun 2009) | 1 line 3379Changed paths: 3380 M /trunk/weka/src/main/java/weka/classifiers/trees/ADTree.java 3381 M /trunk/weka/src/main/java/weka/classifiers/trees/BFTree.java 3382 M /trunk/weka/src/main/java/weka/classifiers/trees/DecisionStump.java 3383 M /trunk/weka/src/main/java/weka/classifiers/trees/FT.java 3384 M /trunk/weka/src/main/java/weka/classifiers/trees/Id3.java 3385 M /trunk/weka/src/main/java/weka/classifiers/trees/J48.java 3386 M /trunk/weka/src/main/java/weka/classifiers/trees/J48graft.java 3387 M /trunk/weka/src/main/java/weka/classifiers/trees/LADTree.java 3388 M /trunk/weka/src/main/java/weka/classifiers/trees/LMT.java 3389 M /trunk/weka/src/main/java/weka/classifiers/trees/REPTree.java 3390 M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java 3391 M /trunk/weka/src/main/java/weka/classifiers/trees/SimpleCart.java 3392 M /trunk/weka/src/main/java/weka/classifiers/trees/UserClassifier.java 3393 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/ClassifierTree.java 3394 3395getCapabilities() now disables all capabilities before enabling individual ones. 3396------------------------------------------------------------------------ 3397r5486 | mhall | 2009-06-02 14:55:22 +1200 (Tue, 02 Jun 2009) | 1 line 3398Changed paths: 3399 M /trunk/weka/src/main/java/weka/classifiers/Classifier.java 3400 M /trunk/weka/src/main/java/weka/classifiers/MultipleClassifiersCombiner.java 3401 M /trunk/weka/src/main/java/weka/classifiers/SingleClassifierEnhancer.java 3402 3403getCapabilities() now returns maximally permissive capabilities. Now has a default implementation of RevisionHandler. 3404------------------------------------------------------------------------ 3405r5487 | mhall | 2009-06-02 15:08:27 +1200 (Tue, 02 Jun 2009) | 1 line 3406Changed paths: 3407 M /trunk/weka/src/main/java/weka/clusterers/AbstractClusterer.java 3408 3409getCapabilities() now returns maximally permissive capabilities. Now has a default implementation of RevisionHandler. 3410------------------------------------------------------------------------ 3411r5488 | mhall | 2009-06-02 15:09:22 +1200 (Tue, 02 Jun 2009) | 1 line 3412Changed paths: 3413 M /trunk/weka/src/main/java/weka/clusterers/CLOPE.java 3414 M /trunk/weka/src/main/java/weka/clusterers/Cobweb.java 3415 M /trunk/weka/src/main/java/weka/clusterers/DBScan.java 3416 M /trunk/weka/src/main/java/weka/clusterers/FarthestFirst.java 3417 M /trunk/weka/src/main/java/weka/clusterers/FilteredClusterer.java 3418 M /trunk/weka/src/main/java/weka/clusterers/MakeDensityBasedClusterer.java 3419 M /trunk/weka/src/main/java/weka/clusterers/OPTICS.java 3420 M /trunk/weka/src/main/java/weka/clusterers/SimpleKMeans.java 3421 M /trunk/weka/src/main/java/weka/clusterers/XMeans.java 3422 M /trunk/weka/src/main/java/weka/clusterers/sIB.java 3423 3424getCapabilities() now disables all capabilities before enabling individual ones. 3425------------------------------------------------------------------------ 3426r5489 | mhall | 2009-06-02 15:22:36 +1200 (Tue, 02 Jun 2009) | 1 line 3427Changed paths: 3428 M /trunk/weka/src/main/java/weka/estimators/Estimator.java 3429 3430getCapabilities() now returns maximally permissive capabilities. Now has a default implementation of RevisionHandler. 3431------------------------------------------------------------------------ 3432r5490 | mhall | 2009-06-02 15:23:10 +1200 (Tue, 02 Jun 2009) | 1 line 3433Changed paths: 3434 M /trunk/weka/src/main/java/weka/estimators/DiscreteEstimator.java 3435 M /trunk/weka/src/main/java/weka/estimators/KernelEstimator.java 3436 M /trunk/weka/src/main/java/weka/estimators/MahalanobisEstimator.java 3437 M /trunk/weka/src/main/java/weka/estimators/NormalEstimator.java 3438 M /trunk/weka/src/main/java/weka/estimators/PoissonEstimator.java 3439 3440getCapabilities() now disables all capabilities before enabling individual ones. 3441------------------------------------------------------------------------ 3442r5491 | mhall | 2009-06-02 15:48:42 +1200 (Tue, 02 Jun 2009) | 1 line 3443Changed paths: 3444 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/AddClassification.java 3445 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/AttributeSelection.java 3446 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/ClassOrder.java 3447 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/Discretize.java 3448 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/NominalToBinary.java 3449 M /trunk/weka/src/main/java/weka/filters/supervised/attribute/PLSFilter.java 3450 3451getCapabilities() now disables all capabilities before enabling individual ones. 3452------------------------------------------------------------------------ 3453r5492 | mhall | 2009-06-02 15:50:44 +1200 (Tue, 02 Jun 2009) | 1 line 3454Changed paths: 3455 M /trunk/weka/src/main/java/weka/filters/supervised/instance/Resample.java 3456 M /trunk/weka/src/main/java/weka/filters/supervised/instance/SMOTE.java 3457 M /trunk/weka/src/main/java/weka/filters/supervised/instance/SpreadSubsample.java 3458 M /trunk/weka/src/main/java/weka/filters/supervised/instance/StratifiedRemoveFolds.java 3459 3460getCapabilities() now disables all capabilities before enabling individual ones. 3461------------------------------------------------------------------------ 3462r5498 | mhall | 2009-06-03 09:29:48 +1200 (Wed, 03 Jun 2009) | 1 line 3463Changed paths: 3464 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Add.java 3465 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddExpression.java 3466 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddID.java 3467 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddNoise.java 3468 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddValues.java 3469 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Center.java 3470 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/ChangeDateFormat.java 3471 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/ClassAssigner.java 3472 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Copy.java 3473 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Discretize.java 3474 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/EMImputation.java 3475 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/FirstOrder.java 3476 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/InterquartileRange.java 3477 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/KernelFilter.java 3478 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MakeIndicator.java 3479 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MathExpression.java 3480 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MergeTwoValues.java 3481 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MultiInstanceToPropositional.java 3482 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NominalToBinary.java 3483 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NominalToString.java 3484 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Normalize.java 3485 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericCleaner.java 3486 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericToBinary.java 3487 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericToNominal.java 3488 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericTransform.java 3489 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Obfuscate.java 3490 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/PartitionedMultiFilter.java 3491 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/PrincipalComponents.java 3492 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/PropositionalToMultiInstance.java 3493 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RELAGGS.java 3494 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RandomProjection.java 3495 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RandomSubset.java 3496 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Remove.java 3497 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RemoveType.java 3498 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Reorder.java 3499 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/ReplaceMissingValues.java 3500 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/SortLabels.java 3501 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Standardize.java 3502 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToNominal.java 3503 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToWordVector.java 3504 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/SwapValues.java 3505 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/TimeSeriesDelta.java 3506 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/TimeSeriesTranslate.java 3507 M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Wavelet.java 3508 3509getCapabilities() now disables all capabilities before enabling individual ones. 3510------------------------------------------------------------------------ 3511r5499 | mhall | 2009-06-03 09:36:15 +1200 (Wed, 03 Jun 2009) | 1 line 3512Changed paths: 3513 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/NonSparseToSparse.java 3514 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/Normalize.java 3515 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/Randomize.java 3516 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveFolds.java 3517 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveFrequentValues.java 3518 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveMisclassified.java 3519 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemovePercentage.java 3520 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveRange.java 3521 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveWithValues.java 3522 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/Resample.java 3523 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/ReservoirSample.java 3524 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/SparseToNonSparse.java 3525 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/SubsetByExpression.java 3526 3527getCapabilities() now disables all capabilities before enabling individual ones. 3528------------------------------------------------------------------------ 3529r5500 | mhall | 2009-06-03 09:37:39 +1200 (Wed, 03 Jun 2009) | 1 line 3530Changed paths: 3531 M /trunk/weka/src/main/java/weka/filters/Filter.java 3532 3533Now has maximally permissive capabilities as default and default implementation of RevisionHandler. 3534------------------------------------------------------------------------ 3535r5501 | mhall | 2009-06-03 09:37:47 +1200 (Wed, 03 Jun 2009) | 1 line 3536Changed paths: 3537 M /trunk/weka/src/main/java/weka/filters/AllFilter.java 3538 M /trunk/weka/src/main/java/weka/filters/MultiFilter.java 3539 3540getCapabilities() now disables all capabilities before enabling individual ones. 3541------------------------------------------------------------------------ 3542r5505 | mhall | 2009-06-03 10:06:26 +1200 (Wed, 03 Jun 2009) | 1 line 3543Changed paths: 3544 M /trunk/weka/src/main/java/weka/associations/AbstractAssociator.java 3545 3546Doc update. 3547------------------------------------------------------------------------ 3548r5506 | mhall | 2009-06-03 11:00:04 +1200 (Wed, 03 Jun 2009) | 1 line 3549Changed paths: 3550 M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java 3551 3552Now checks capabilities when data changes. 3553------------------------------------------------------------------------ 3554r5508 | mhall | 2009-06-03 11:31:53 +1200 (Wed, 03 Jun 2009) | 1 line 3555Changed paths: 3556 M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java 3557 3558Fixed a class cast exception. 3559------------------------------------------------------------------------ 3560r5512 | mhall | 2009-06-03 11:42:13 +1200 (Wed, 03 Jun 2009) | 1 line 3561Changed paths: 3562 M /trunk/weka/src/main/java/weka/classifiers/Classifier.java 3563 3564Doc update. 3565------------------------------------------------------------------------ 3566r5514 | mhall | 2009-06-03 12:20:56 +1200 (Wed, 03 Jun 2009) | 1 line 3567Changed paths: 3568 M /trunk/weka/src/main/java/weka/gui/beans/ClassAssigner.java 3569 3570Now passes on stop notifications to upstream beans. 3571------------------------------------------------------------------------ 3572r5520 | mhall | 2009-06-03 14:49:34 +1200 (Wed, 03 Jun 2009) | 1 line 3573Changed paths: 3574 M /trunk/weka/src/main/java/weka/classifiers/functions/MultilayerPerceptron.java 3575 3576Now implements Randomizable. 3577------------------------------------------------------------------------ 3578r5524 | mhall | 2009-06-03 15:05:37 +1200 (Wed, 03 Jun 2009) | 1 line 3579Changed paths: 3580 M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java 3581 3582No need to disable any capabilities here as that gets done in SingeClassifierEnhancer. 3583------------------------------------------------------------------------ 3584r5530 | mhall | 2009-06-03 15:38:43 +1200 (Wed, 03 Jun 2009) | 1 line 3585Changed paths: 3586 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/ClassifierTree.java 3587 3588Now enables all capabilities by default 3589------------------------------------------------------------------------ 3590r5532 | mhall | 2009-06-03 15:41:31 +1200 (Wed, 03 Jun 2009) | 1 line 3591Changed paths: 3592 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java 3593 3594Now disables all capabilities before enabling individual ones. 3595------------------------------------------------------------------------ 3596r5533 | mhall | 2009-06-03 15:44:05 +1200 (Wed, 03 Jun 2009) | 1 line 3597Changed paths: 3598 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/PruneableClassifierTree.java 3599 3600Now disables all capabilities before enabling individual ones. 3601------------------------------------------------------------------------ 3602r5534 | mhall | 2009-06-03 15:45:13 +1200 (Wed, 03 Jun 2009) | 1 line 3603Changed paths: 3604 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/NBTreeClassifierTree.java 3605 3606Now disables all capabilities before enabling individual ones. 3607------------------------------------------------------------------------ 3608r5544 | mhall | 2009-06-04 09:43:32 +1200 (Thu, 04 Jun 2009) | 1 line 3609Changed paths: 3610 M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTree.java 3611 3612Now disables all capabilities before enabling individual ones. 3613------------------------------------------------------------------------ 3614r5554 | mhall | 2009-06-04 12:56:28 +1200 (Thu, 04 Jun 2009) | 1 line 3615Changed paths: 3616 M /trunk/weka/src/main/java/weka/core/Copyright.props 3617 3618Updated for version 3.7.0 3619------------------------------------------------------------------------ 3620r5558 | mhall | 2009-06-04 14:12:49 +1200 (Thu, 04 Jun 2009) | 1 line 3621Changed paths: 3622 M /trunk/weka/src/main/java/weka/core/version.txt 3623 3624Updated to 3-7-0 3625------------------------------------------------------------------------ 3626r5563 | mhall | 2009-06-04 15:13:54 +1200 (Thu, 04 Jun 2009) | 1 line 3627Changed paths: 3628 M /trunk/weka/src/main/java/weka/associations/HotSpot.java 3629 D /trunk/weka/src/main/java/weka/associations/vote.arff 3630 D /trunk/weka/src/main/java/weka/associations/votes.arff 3631 M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveASEvaluation.java 3632 M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveAttributeEval.java 3633 M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveSubsetEval.java 3634 M /trunk/weka/src/main/java/weka/attributeSelection/FilteredAttributeEval.java 3635 M /trunk/weka/src/main/java/weka/attributeSelection/FilteredSubsetEval.java 3636 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/GeneralRegression.java 3637 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/NeuralNetwork.java 3638 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/PMMLClassifier.java 3639 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/Regression.java 3640 M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java 3641 M /trunk/weka/src/main/java/weka/core/ClassloaderUtil.java 3642 M /trunk/weka/src/main/java/weka/core/EnvironmentHandler.java 3643 M /trunk/weka/src/main/java/weka/core/pmml/Apply.java 3644 M /trunk/weka/src/main/java/weka/core/pmml/Array.java 3645 M /trunk/weka/src/main/java/weka/core/pmml/BuiltInArithmetic.java 3646 M /trunk/weka/src/main/java/weka/core/pmml/BuiltInMath.java 3647 M /trunk/weka/src/main/java/weka/core/pmml/Constant.java 3648 M /trunk/weka/src/main/java/weka/core/pmml/DefineFunction.java 3649 M /trunk/weka/src/main/java/weka/core/pmml/DerivedFieldMetaInfo.java 3650 M /trunk/weka/src/main/java/weka/core/pmml/Discretize.java 3651 M /trunk/weka/src/main/java/weka/core/pmml/Expression.java 3652 M /trunk/weka/src/main/java/weka/core/pmml/FieldMetaInfo.java 3653 M /trunk/weka/src/main/java/weka/core/pmml/Function.java 3654 M /trunk/weka/src/main/java/weka/core/pmml/MappingInfo.java 3655 M /trunk/weka/src/main/java/weka/core/pmml/MiningFieldMetaInfo.java 3656 M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java 3657 M /trunk/weka/src/main/java/weka/core/pmml/NormContinuous.java 3658 M /trunk/weka/src/main/java/weka/core/pmml/NormDiscrete.java 3659 M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java 3660 M /trunk/weka/src/main/java/weka/core/pmml/PMMLModel.java 3661 M /trunk/weka/src/main/java/weka/core/pmml/PMMLUtils.java 3662 M /trunk/weka/src/main/java/weka/core/pmml/TargetMetaInfo.java 3663 M /trunk/weka/src/main/java/weka/core/pmml/TransformationDictionary.java 3664 M /trunk/weka/src/main/java/weka/core/xml/XStream.java 3665 M /trunk/weka/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java 3666 M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/ReservoirSample.java 3667 M /trunk/weka/src/main/java/weka/gui/beans/ConfigurationEvent.java 3668 M /trunk/weka/src/main/java/weka/gui/beans/ConfigurationListener.java 3669 M /trunk/weka/src/main/java/weka/gui/beans/ConfigurationProducer.java 3670 M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java 3671 M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java 3672 M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluatorCustomizer.java 3673 M /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMaker.java 3674 M /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMakerBeanInfo.java 3675 M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java 3676 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java 3677 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverBeanInfo.java 3678 M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java 3679 M /trunk/weka/src/main/java/weka/gui/beans/Startable.java 3680 M /trunk/weka/src/test/java/weka/associations/HotSpotTest.java 3681 M /trunk/weka/src/test/java/weka/attributeSelection/CostSensitiveAttributeEvalTest.java 3682 M /trunk/weka/src/test/java/weka/attributeSelection/CostSensitiveSubsetEvalTest.java 3683 M /trunk/weka/src/test/java/weka/attributeSelection/FilteredAttributeEvalTest.java 3684 M /trunk/weka/src/test/java/weka/attributeSelection/FilteredSubsetEvalTest.java 3685 M /trunk/weka/src/test/java/weka/attributeSelection/ScatterSearchV1Test.java 3686 M /trunk/weka/src/test/java/weka/attributeSelection/SignificanceAttributeEvalTest.java 3687 M /trunk/weka/src/test/java/weka/attributeSelection/TabuSearchTest.java 3688 M /trunk/weka/src/test/java/weka/classifiers/bayes/DMNBtextTest.java 3689 M /trunk/weka/src/test/java/weka/classifiers/functions/LibLINEARTest.java 3690 M /trunk/weka/src/test/java/weka/classifiers/meta/RotationForestTest.java 3691 M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/AllTests.java 3692 M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/GeneralRegressionTest.java 3693 M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/NeuralNetworkTest.java 3694 M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/RegressionTest.java 3695 M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/TreeModelTest.java 3696 M /trunk/weka/src/test/java/weka/classifiers/rules/DTNBTest.java 3697 M /trunk/weka/src/test/java/weka/classifiers/trees/LADTreeTest.java 3698 M /trunk/weka/src/test/java/weka/clusterers/CLOPETest.java 3699 M /trunk/weka/src/test/java/weka/clusterers/sIBTest.java 3700 M /trunk/weka/src/test/java/weka/core/MathematicalExpressionTest.java 3701 M /trunk/weka/src/test/java/weka/filters/unsupervised/instance/ReservoirSampleTest.java 3702 3703UoW automatically gets copyright for Pentaho contributions. 3704------------------------------------------------------------------------ 3705r5564 | mhall | 2009-06-04 15:23:29 +1200 (Thu, 04 Jun 2009) | 1 line 3706Changed paths: 3707 M /trunk/weka/src/main/java/weka/core/Environment.java 3708 3709UoW automatically gets copyright for Pentaho contributions 3710------------------------------------------------------------------------ 3711
