1------------------------------------------------------------------------
2r4462 | mhall | 2008-07-17 09:37:03 +1200 (Thu, 17 Jul 2008) | 1 line
3Changed paths:
4   M /trunk/weka/classifiers/functions/Logistic.java
5
6
7------------------------------------------------------------------------
8r4463 | fracpete | 2008-07-19 20:40:35 +1200 (Sat, 19 Jul 2008) | 2 lines
9Changed paths:
10   M /trunk/weka/filters/unsupervised/attribute/ReplaceMissingValues.java
11
12enabled filter to deal with nominal attributes that have no labels at all (can happen if data is loaded from databases, a NULL column)
13
14------------------------------------------------------------------------
15r4466 | mhall | 2008-07-29 10:29:12 +1200 (Tue, 29 Jul 2008) | 2 lines
16Changed paths:
17   M /trunk/weka/core/converters/ArffLoader.java
18   M /trunk/weka/core/converters/C45Loader.java
19   M /trunk/weka/core/converters/CSVLoader.java
20   M /trunk/weka/core/converters/LibSVMLoader.java
21   M /trunk/weka/core/converters/SerializedInstancesLoader.java
22   M /trunk/weka/core/converters/XRFFLoader.java
23
24Now closes input streams and free resources.
25
26------------------------------------------------------------------------
27r4468 | mhall | 2008-07-30 09:21:27 +1200 (Wed, 30 Jul 2008) | 2 lines
28Changed paths:
29   M /trunk/weka/classifiers/bayes/DMNBtext.java
30
31javadoc fix
32
33------------------------------------------------------------------------
34r4469 | mhall | 2008-07-30 10:41:11 +1200 (Wed, 30 Jul 2008) | 2 lines
35Changed paths:
36   M /branches/book2ndEd-branch/weka/filters/unsupervised/attribute/RemoveUseless.java
37   M /trunk/weka/filters/unsupervised/attribute/RemoveUseless.java
38
39Changed the variance percentage computation for a given attribute to be equal to # distinct/(total # inst - # missing)
40
41------------------------------------------------------------------------
42r4470 | mhall | 2008-07-30 10:41:12 +1200 (Wed, 30 Jul 2008) | 2 lines
43Changed paths:
44   M /trunk/weka/filters/unsupervised/attribute/RemoveUseless.java
45
46Moved the cast to double outside the brackets in the denominator for computing variancePercent
47
48------------------------------------------------------------------------
49r4471 | mhall | 2008-08-01 11:48:33 +1200 (Fri, 01 Aug 2008) | 2 lines
50Changed paths:
51   M /trunk/weka/gui/beans/AttributeSummarizer.java
52
53Now sets the coloring index to be equal to the class attribute's index (if set).
54
55------------------------------------------------------------------------
56r4473 | mhall | 2008-08-01 12:02:31 +1200 (Fri, 01 Aug 2008) | 2 lines
57Changed paths:
58   M /trunk/weka/filters/unsupervised/instance/RemovePercentage.java
59
60Now uses a double rather than an int for the percentage
61
62------------------------------------------------------------------------
63r4474 | mhall | 2008-08-02 15:05:10 +1200 (Sat, 02 Aug 2008) | 2 lines
64Changed paths:
65   M /trunk/weka/build.xml
66
67Added RevisionHandler.class to the list of classes packaged in the remoteEngine.jar file
68
69------------------------------------------------------------------------
70r4476 | fracpete | 2008-08-06 11:16:18 +1200 (Wed, 06 Aug 2008) | 1 line
71Changed paths:
72   M /trunk/weka/classifiers/bayes/net/GUI.java
73   M /trunk/weka/classifiers/trees/UserClassifier.java
74   M /trunk/weka/gui/GenericArrayEditor.java
75   M /trunk/weka/gui/GenericObjectEditor.java
76   M /trunk/weka/gui/PropertyDialog.java
77   M /trunk/weka/gui/PropertyPanel.java
78   M /trunk/weka/gui/experiment/AlgorithmListPanel.java
79   M /trunk/weka/gui/explorer/ClassifierPanel.java
80   M /trunk/weka/gui/explorer/PreprocessPanel.java
81
82
83------------------------------------------------------------------------
84r4477 | fracpete | 2008-08-11 10:43:06 +1200 (Mon, 11 Aug 2008) | 1 line
85Changed paths:
86   M /trunk/weka/gui/PropertySheetPanel.java
87
88
89------------------------------------------------------------------------
90r4478 | mhall | 2008-08-11 11:39:43 +1200 (Mon, 11 Aug 2008) | 1 line
91Changed paths:
92   M /trunk/weka/experiment/RemoteEngine.java
93
94
95------------------------------------------------------------------------
96r4479 | mhall | 2008-08-11 11:44:58 +1200 (Mon, 11 Aug 2008) | 2 lines
97Changed paths:
98   M /trunk/weka/build.xml
99
100Now includes weka.core.Utils in remoteEngine.jar
101
102------------------------------------------------------------------------
103r4481 | fracpete | 2008-08-12 09:32:32 +1200 (Tue, 12 Aug 2008) | 1 line
104Changed paths:
105   M /trunk/weka/gui/SimpleCLIPanel.java
106
107
108------------------------------------------------------------------------
109r4483 | mhall | 2008-08-12 09:52:20 +1200 (Tue, 12 Aug 2008) | 2 lines
110Changed paths:
111   M /trunk/weka/classifiers/functions/SMO.java
112
113Fixed bug in attributeNames(). It wasn't using the BinarySMO's sparse indices vector to index attribute names.
114
115------------------------------------------------------------------------
116r4484 | fracpete | 2008-08-13 13:23:03 +1200 (Wed, 13 Aug 2008) | 1 line
117Changed paths:
118   M /trunk/weka/core/TechnicalInformation.java
119
120
121------------------------------------------------------------------------
122r4485 | fracpete | 2008-08-17 13:33:14 +1200 (Sun, 17 Aug 2008) | 1 line
123Changed paths:
124   M /trunk/weka/core/ClassDiscovery.java
125
126
127------------------------------------------------------------------------
128r4486 | fracpete | 2008-08-17 13:37:29 +1200 (Sun, 17 Aug 2008) | 1 line
129Changed paths:
130   M /trunk/weka/core/ClassDiscovery.java
131
132
133------------------------------------------------------------------------
134r4487 | fracpete | 2008-08-17 14:14:46 +1200 (Sun, 17 Aug 2008) | 1 line
135Changed paths:
136   M /trunk/weka/experiment/DatabaseUtils.java
137
138
139------------------------------------------------------------------------
140r4490 | mhall | 2008-08-19 11:04:57 +1200 (Tue, 19 Aug 2008) | 1 line
141Changed paths:
142   M /trunk/weka/gui/visualize/Plot2D.java
143
144
145------------------------------------------------------------------------
146r4491 | mhall | 2008-08-19 13:50:51 +1200 (Tue, 19 Aug 2008) | 1 line
147Changed paths:
148   M /trunk/weka/classifiers/Evaluation.java
149
150
151------------------------------------------------------------------------
152r4492 | fracpete | 2008-08-20 13:34:18 +1200 (Wed, 20 Aug 2008) | 2 lines
153Changed paths:
154   M /trunk/weka/associations/Tertius.java
155
156parts string ("-p") is only returned if set (currently disabled anyway)
157
158------------------------------------------------------------------------
159r4493 | fracpete | 2008-08-20 14:17:53 +1200 (Wed, 20 Aug 2008) | 1 line
160Changed paths:
161   M /trunk/weka/datagenerators/DataGenerator.java
162
163
164------------------------------------------------------------------------
165r4494 | mhall | 2008-08-21 15:48:34 +1200 (Thu, 21 Aug 2008) | 1 line
166Changed paths:
167   M /trunk/weka/clusterers/SimpleKMeans.java
168
169
170------------------------------------------------------------------------
171r4496 | fracpete | 2008-08-21 17:59:16 +1200 (Thu, 21 Aug 2008) | 1 line
172Changed paths:
173   M /trunk/weka/gui/explorer/PreprocessPanel.java
174
175
176------------------------------------------------------------------------
177r4497 | mhall | 2008-08-22 12:01:10 +1200 (Fri, 22 Aug 2008) | 1 line
178Changed paths:
179   M /trunk/weka/gui/AttributeSummaryPanel.java
180
181
182------------------------------------------------------------------------
183r4498 | mhall | 2008-08-22 12:06:31 +1200 (Fri, 22 Aug 2008) | 1 line
184Changed paths:
185   M /trunk/weka/filters/unsupervised/attribute/StringToNominal.java
186
187
188------------------------------------------------------------------------
189r4499 | fracpete | 2008-08-25 09:40:08 +1200 (Mon, 25 Aug 2008) | 2 lines
190Changed paths:
191   M /trunk/weka/core/converters/DatabaseLoader.java
192   M /trunk/weka/experiment/DatabaseUtils.java
193   M /trunk/weka/experiment/DatabaseUtils.props
194   M /trunk/weka/experiment/DatabaseUtils.props.hsql
195   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver
196   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005
197   M /trunk/weka/experiment/DatabaseUtils.props.mysql
198   M /trunk/weka/experiment/DatabaseUtils.props.odbc
199   M /trunk/weka/experiment/DatabaseUtils.props.oracle
200   M /trunk/weka/experiment/DatabaseUtils.props.postgresql
201   M /trunk/weka/experiment/DatabaseUtils.props.sqlite3
202   M /trunk/weka/experiment/InstanceQuery.java
203
204added new type TIME (= 10) for correctly importing time columns from databases
205
206------------------------------------------------------------------------
207r4500 | fracpete | 2008-08-25 09:46:14 +1200 (Mon, 25 Aug 2008) | 2 lines
208Changed paths:
209   M /trunk/weka/experiment/DatabaseUtils.props
210   M /trunk/weka/experiment/DatabaseUtils.props.hsql
211   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver
212   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005
213   M /trunk/weka/experiment/DatabaseUtils.props.mysql
214   M /trunk/weka/experiment/DatabaseUtils.props.odbc
215   M /trunk/weka/experiment/DatabaseUtils.props.oracle
216   M /trunk/weka/experiment/DatabaseUtils.props.postgresql
217   M /trunk/weka/experiment/DatabaseUtils.props.sqlite3
218
219fixed comments
220
221------------------------------------------------------------------------
222r4501 | fracpete | 2008-08-25 09:49:54 +1200 (Mon, 25 Aug 2008) | 2 lines
223Changed paths:
224   M /trunk/weka/experiment/DatabaseUtils.props
225   M /trunk/weka/experiment/DatabaseUtils.props.hsql
226   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver
227   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005
228   M /trunk/weka/experiment/DatabaseUtils.props.mysql
229   M /trunk/weka/experiment/DatabaseUtils.props.odbc
230   M /trunk/weka/experiment/DatabaseUtils.props.oracle
231   M /trunk/weka/experiment/DatabaseUtils.props.postgresql
232   M /trunk/weka/experiment/DatabaseUtils.props.sqlite3
233
234fixed typo: gloat -> float
235
236------------------------------------------------------------------------
237r4502 | mhall | 2008-08-25 09:51:58 +1200 (Mon, 25 Aug 2008) | 1 line
238Changed paths:
239   M /trunk/weka/experiment/RemoteEngine.java
240   M /trunk/weka/experiment/RemoteExperimentSubTask.java
241
242
243------------------------------------------------------------------------
244r4505 | fracpete | 2008-08-25 10:33:48 +1200 (Mon, 25 Aug 2008) | 1 line
245Changed paths:
246   M /trunk/weka/classifiers/bayes/net/EditableBayesNet.java
247   M /trunk/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java
248   M /trunk/weka/core/Environment.java
249   M /trunk/weka/core/parser/java_cup/Lexer.java
250
251
252------------------------------------------------------------------------
253r4506 | fracpete | 2008-08-25 11:44:12 +1200 (Mon, 25 Aug 2008) | 1 line
254Changed paths:
255   M /trunk/weka/gui/ResultHistoryPanel.java
256
257
258------------------------------------------------------------------------
259r4507 | mhall | 2008-09-05 15:37:26 +1200 (Fri, 05 Sep 2008) | 1 line
260Changed paths:
261   M /trunk/weka/build.xml
262
263
264------------------------------------------------------------------------
265r4508 | mhall | 2008-09-08 11:11:41 +1200 (Mon, 08 Sep 2008) | 1 line
266Changed paths:
267   M /trunk/weka/experiment/remote.policy
268   M /trunk/weka/experiment/remote.policy.example
269
270
271------------------------------------------------------------------------
272r4509 | fracpete | 2008-09-08 14:41:56 +1200 (Mon, 08 Sep 2008) | 2 lines
273Changed paths:
274   M /trunk/weka/gui/PropertyDialog.java
275
276fixed constructor - now definitely modal (may have caused problems in conjunction with the array editor, not updating the values correctly)
277
278------------------------------------------------------------------------
279r4510 | fracpete | 2008-09-08 14:43:40 +1200 (Mon, 08 Sep 2008) | 2 lines
280Changed paths:
281   M /trunk/weka/gui/GenericArrayEditor.java
282   M /trunk/weka/gui/GenericObjectEditor.java
283
284fixed rendering of strings: array entries are now centered and no longer cut off at the bottom
285
286------------------------------------------------------------------------
287r4514 | fracpete | 2008-09-12 08:57:26 +1200 (Fri, 12 Sep 2008) | 1 line
288Changed paths:
289   M /trunk/weka/core/converters/DatabaseLoader.java
290   M /trunk/weka/experiment/InstanceQuery.java
291
292
293------------------------------------------------------------------------
294r4515 | fracpete | 2008-09-15 11:00:10 +1200 (Mon, 15 Sep 2008) | 1 line
295Changed paths:
296   M /branches/book2ndEd-branch/weka/gui/visualize/PostscriptGraphics.java
297   M /trunk/weka/gui/visualize/PostscriptGraphics.java
298
299
300------------------------------------------------------------------------
301r4517 | fracpete | 2008-09-15 15:24:52 +1200 (Mon, 15 Sep 2008) | 1 line
302Changed paths:
303   M /trunk/weka/gui/GenericObjectEditor.java
304
305
306------------------------------------------------------------------------
307r4518 | mhall | 2008-09-17 13:40:27 +1200 (Wed, 17 Sep 2008) | 2 lines
308Changed paths:
309   A /trunk/weka/classifiers/pmml
310   A /trunk/weka/classifiers/pmml/consumer
311   A /trunk/weka/classifiers/pmml/consumer/GeneralRegression.java
312   A /trunk/weka/classifiers/pmml/consumer/NeuralNetwork.java
313   A /trunk/weka/classifiers/pmml/consumer/PMMLClassifier.java
314   A /trunk/weka/classifiers/pmml/consumer/Regression.java
315   A /trunk/weka/core/pmml
316   A /trunk/weka/core/pmml/Apply.java
317   A /trunk/weka/core/pmml/BuiltInArithmetic.java
318   A /trunk/weka/core/pmml/BuiltInMath.java
319   A /trunk/weka/core/pmml/BuiltInString.java
320   A /trunk/weka/core/pmml/Constant.java
321   A /trunk/weka/core/pmml/DefineFunction.java
322   A /trunk/weka/core/pmml/DerivedFieldMetaInfo.java
323   A /trunk/weka/core/pmml/Discretize.java
324   A /trunk/weka/core/pmml/Expression.java
325   A /trunk/weka/core/pmml/FieldMetaInfo.java
326   A /trunk/weka/core/pmml/FieldRef.java
327   A /trunk/weka/core/pmml/Function.java
328   A /trunk/weka/core/pmml/MappingInfo.java
329   A /trunk/weka/core/pmml/MiningFieldMetaInfo.java
330   A /trunk/weka/core/pmml/MiningSchema.java
331   A /trunk/weka/core/pmml/NormContinuous.java
332   A /trunk/weka/core/pmml/NormDiscrete.java
333   A /trunk/weka/core/pmml/PMMLFactory.java
334   A /trunk/weka/core/pmml/PMMLModel.java
335   A /trunk/weka/core/pmml/PMMLUtils.java
336   A /trunk/weka/core/pmml/TargetMetaInfo.java
337   A /trunk/weka/core/pmml/TransformationDictionary.java
338
339Initial import.
340
341------------------------------------------------------------------------
342r4519 | mhall | 2008-09-17 13:44:18 +1200 (Wed, 17 Sep 2008) | 2 lines
343Changed paths:
344   M /trunk/weka/classifiers/Evaluation.java
345   M /trunk/weka/gui/explorer/ClassifierPanel.java
346
347Added support for loading and testing PMML classifiers.
348
349------------------------------------------------------------------------
350r4520 | mhall | 2008-09-19 20:04:23 +1200 (Fri, 19 Sep 2008) | 2 lines
351Changed paths:
352   M /trunk/weka/classifiers/Evaluation.java
353
354Fixed bug that prevented predictions being printed out when class is  numeric.
355
356------------------------------------------------------------------------
357r4522 | fracpete | 2008-09-21 12:19:42 +1200 (Sun, 21 Sep 2008) | 2 lines
358Changed paths:
359   M /trunk/weka/filters/unsupervised/attribute/Add.java
360
361extended Add filter to in order to be able to add STRING and DATE attributes as well
362
363------------------------------------------------------------------------
364r4525 | mhall | 2008-09-23 20:12:19 +1200 (Tue, 23 Sep 2008) | 2 lines
365Changed paths:
366   M /trunk/weka/core/pmml/PMMLFactory.java
367
368Removed some redundant constants
369
370------------------------------------------------------------------------
371r4537 | mhall | 2008-10-07 11:48:44 +1300 (Tue, 07 Oct 2008) | 1 line
372Changed paths:
373   M /trunk/weka/core/Instance.java
374   M /trunk/weka/core/Instances.java
375
376
377------------------------------------------------------------------------
378r4538 | mhall | 2008-10-09 10:56:49 +1300 (Thu, 09 Oct 2008) | 1 line
379Changed paths:
380   M /trunk/weka/build.xml
381
382Deleted cvs stuff and added new subversion targets.
383------------------------------------------------------------------------
384r4541 | fracpete | 2008-10-13 14:56:19 +1300 (Mon, 13 Oct 2008) | 1 line
385Changed paths:
386   M /trunk/weka/gui/visualize/VisualizePanel.java
387
388added get-method for m_plot member (useful if an external application wants to save the generated ROC curve automatically)
389------------------------------------------------------------------------
390r4543 | fracpete | 2008-10-13 16:19:52 +1300 (Mon, 13 Oct 2008) | 3 lines
391Changed paths:
392   M /trunk/weka/gui/visualize/VisualizePanel.java
393
394testing the pre-commit hook
395
396
397------------------------------------------------------------------------
398r4544 | fracpete | 2008-10-13 16:22:35 +1300 (Mon, 13 Oct 2008) | 1 line
399Changed paths:
400   M /trunk/weka/gui/visualize/VisualizePanel.java
401
402updated copyright - for testing the pre-commit hook
403------------------------------------------------------------------------
404r4545 | fracpete | 2008-10-13 23:02:01 +1300 (Mon, 13 Oct 2008) | 1 line
405Changed paths:
406   M /trunk/weka/gui/visualize/VisualizePanel.java
407
408added public removeAllPlots() methods
409------------------------------------------------------------------------
410r4547 | mhall | 2008-10-15 04:06:52 +1300 (Wed, 15 Oct 2008) | 1 line
411Changed paths:
412   M /trunk/weka/classifiers/functions/supportVector/StringKernel.java
413
414Missing GPL header and copyright
415------------------------------------------------------------------------
416r4549 | mhall | 2008-10-15 04:12:23 +1300 (Wed, 15 Oct 2008) | 1 line
417Changed paths:
418   M /trunk/weka/classifiers/functions/supportVector/CachedKernel.java
419
420Missing copyright notice
421------------------------------------------------------------------------
422r4551 | mhall | 2008-10-15 05:04:44 +1300 (Wed, 15 Oct 2008) | 1 line
423Changed paths:
424   A /trunk/weka/filters/supervised/instance/SMOTE.java
425
426Initial import of Ryan Lichtenwalter's implementation of SMOTE
427------------------------------------------------------------------------
428r4552 | mhall | 2008-10-15 05:07:49 +1300 (Wed, 15 Oct 2008) | 1 line
429Changed paths:
430   M /trunk/weka/gui/GenericObjectEditor.props
431
432Added SMOTE
433------------------------------------------------------------------------
434r4553 | mhall | 2008-10-15 10:20:12 +1300 (Wed, 15 Oct 2008) | 1 line
435Changed paths:
436   M /trunk/weka/core/converters/CSVLoader.java
437
438Now doesn't load data into memory before tokenizing. Code tidied.
439------------------------------------------------------------------------
440r4555 | fracpete | 2008-10-15 10:45:58 +1300 (Wed, 15 Oct 2008) | 4 lines
441Changed paths:
442   M /trunk/weka/filters/supervised/instance/SMOTE.java
443
444fixed indentation
445fixed option handling (pushed checks from setOptions method into actual set-methods; getOptions uses a vector now)
446removed the detectMinorityClass option completely
447added Javadoc comments for members
448------------------------------------------------------------------------
449r4557 | fracpete | 2008-10-15 11:28:46 +1300 (Wed, 15 Oct 2008) | 1 line
450Changed paths:
451   M /trunk/weka/associations/AssociatorEvaluation.java
452   M /trunk/weka/associations/CheckAssociator.java
453   M /trunk/weka/associations/FilteredAssociator.java
454   M /trunk/weka/associations/GeneralizedSequentialPatterns.java
455   M /trunk/weka/associations/SingleAssociatorEnhancer.java
456   M /trunk/weka/associations/gsp/Element.java
457   M /trunk/weka/associations/gsp/Sequence.java
458   M /trunk/weka/attributeSelection/CheckAttributeSelection.java
459   M /trunk/weka/attributeSelection/SVMAttributeEval.java
460   M /trunk/weka/classifiers/BVDecomposeSegCVSub.java
461   M /trunk/weka/classifiers/bayes/NaiveBayesMultinomialUpdateable.java
462   M /trunk/weka/classifiers/bayes/WAODE.java
463   M /trunk/weka/classifiers/bayes/net/search/global/TAN.java
464   M /trunk/weka/classifiers/functions/LibSVM.java
465   M /trunk/weka/classifiers/functions/PLSClassifier.java
466   M /trunk/weka/classifiers/functions/SVMreg.java
467   M /trunk/weka/classifiers/functions/supportVector/CheckKernel.java
468   M /trunk/weka/classifiers/functions/supportVector/KernelEvaluation.java
469   M /trunk/weka/classifiers/functions/supportVector/Puk.java
470   M /trunk/weka/classifiers/functions/supportVector/RegOptimizer.java
471   M /trunk/weka/classifiers/functions/supportVector/RegSMO.java
472   M /trunk/weka/classifiers/functions/supportVector/RegSMOImproved.java
473   M /trunk/weka/classifiers/functions/supportVector/StringKernel.java
474   M /trunk/weka/classifiers/meta/ClassificationViaClustering.java
475   M /trunk/weka/classifiers/meta/GridSearch.java
476   M /trunk/weka/classifiers/meta/RandomSubSpace.java
477   M /trunk/weka/classifiers/mi/CitationKNN.java
478   M /trunk/weka/classifiers/mi/MDD.java
479   M /trunk/weka/classifiers/mi/MIBoost.java
480   M /trunk/weka/classifiers/mi/MIDD.java
481   M /trunk/weka/classifiers/mi/MIEMDD.java
482   M /trunk/weka/classifiers/mi/MILR.java
483   M /trunk/weka/classifiers/mi/MINND.java
484   M /trunk/weka/classifiers/mi/MIOptimalBall.java
485   M /trunk/weka/classifiers/mi/MISMO.java
486   M /trunk/weka/classifiers/mi/MISVM.java
487   M /trunk/weka/classifiers/mi/MIWrapper.java
488   M /trunk/weka/classifiers/mi/SimpleMI.java
489   M /trunk/weka/classifiers/mi/TLD.java
490   M /trunk/weka/classifiers/mi/TLDSimple.java
491   M /trunk/weka/classifiers/mi/supportVector/MIPolyKernel.java
492   M /trunk/weka/classifiers/mi/supportVector/MIRBFKernel.java
493   M /trunk/weka/classifiers/misc/MinMaxExtension.java
494   M /trunk/weka/classifiers/misc/OLM.java
495   M /trunk/weka/classifiers/misc/OSDL.java
496   M /trunk/weka/classifiers/misc/SerializedClassifier.java
497   M /trunk/weka/classifiers/misc/monotone/AbsoluteLossFunction.java
498   M /trunk/weka/classifiers/misc/monotone/BitMatrix.java
499   M /trunk/weka/classifiers/misc/monotone/BooleanBitMatrix.java
500   M /trunk/weka/classifiers/misc/monotone/Coordinates.java
501   M /trunk/weka/classifiers/misc/monotone/CumulativeDiscreteDistribution.java
502   M /trunk/weka/classifiers/misc/monotone/DiscreteDistribution.java
503   M /trunk/weka/classifiers/misc/monotone/DistributionUtils.java
504   M /trunk/weka/classifiers/misc/monotone/EnumerationIterator.java
505   M /trunk/weka/classifiers/misc/monotone/InstancesComparator.java
506   M /trunk/weka/classifiers/misc/monotone/InstancesUtil.java
507   M /trunk/weka/classifiers/misc/monotone/MultiDimensionalSort.java
508   M /trunk/weka/classifiers/misc/monotone/NominalLossFunction.java
509   M /trunk/weka/classifiers/misc/monotone/OSDLCore.java
510   M /trunk/weka/classifiers/misc/monotone/ZeroOneLossFunction.java
511   M /trunk/weka/clusterers/CheckClusterer.java
512   M /trunk/weka/clusterers/FilteredClusterer.java
513   M /trunk/weka/clusterers/RandomizableClusterer.java
514   M /trunk/weka/clusterers/RandomizableDensityBasedClusterer.java
515   M /trunk/weka/clusterers/RandomizableSingleClustererEnhancer.java
516   M /trunk/weka/clusterers/SingleClustererEnhancer.java
517   M /trunk/weka/clusterers/UpdateableClusterer.java
518   M /trunk/weka/core/AllJavadoc.java
519   M /trunk/weka/core/AttributeLocator.java
520   M /trunk/weka/core/Capabilities.java
521   M /trunk/weka/core/Capabilities.props
522   M /trunk/weka/core/CapabilitiesHandler.java
523   M /trunk/weka/core/Check.java
524   M /trunk/weka/core/CheckGOE.java
525   M /trunk/weka/core/CheckScheme.java
526   M /trunk/weka/core/ClassDiscovery.java
527   M /trunk/weka/core/Copyright.java
528   M /trunk/weka/core/Copyright.props
529   M /trunk/weka/core/Debug.java
530   M /trunk/weka/core/FindWithCapabilities.java
531   M /trunk/weka/core/GlobalInfoJavadoc.java
532   M /trunk/weka/core/Javadoc.java
533   M /trunk/weka/core/ListOptions.java
534   M /trunk/weka/core/MultiInstanceCapabilitiesHandler.java
535   M /trunk/weka/core/RelationalLocator.java
536   M /trunk/weka/core/SerializationHelper.java
537   M /trunk/weka/core/StringLocator.java
538   M /trunk/weka/core/TechnicalInformation.java
539   M /trunk/weka/core/TechnicalInformationHandler.java
540   M /trunk/weka/core/TechnicalInformationHandlerJavadoc.java
541   M /trunk/weka/core/TestInstances.java
542   M /trunk/weka/core/Trie.java
543   M /trunk/weka/core/converters/AbstractFileLoader.java
544   M /trunk/weka/core/converters/LibSVMLoader.java
545   M /trunk/weka/core/converters/LibSVMSaver.java
546   M /trunk/weka/core/converters/TextDirectoryLoader.java
547   M /trunk/weka/core/converters/XRFFLoader.java
548   M /trunk/weka/core/converters/XRFFSaver.java
549   M /trunk/weka/core/matrix/DoubleVector.java
550   M /trunk/weka/core/matrix/ExponentialFormat.java
551   M /trunk/weka/core/matrix/FlexibleDecimalFormat.java
552   M /trunk/weka/core/matrix/FloatingPointFormat.java
553   M /trunk/weka/core/matrix/IntVector.java
554   M /trunk/weka/core/neighboursearch/BallTree.java
555   M /trunk/weka/core/neighboursearch/CoverTree.java
556   M /trunk/weka/core/neighboursearch/KDTree.java
557   M /trunk/weka/core/neighboursearch/LinearNNSearch.java
558   M /trunk/weka/core/neighboursearch/NearestNeighbourSearch.java
559   M /trunk/weka/core/neighboursearch/PerformanceStats.java
560   M /trunk/weka/core/neighboursearch/TreePerformanceStats.java
561   M /trunk/weka/core/neighboursearch/balltrees/BallNode.java
562   M /trunk/weka/core/neighboursearch/balltrees/BallSplitter.java
563   M /trunk/weka/core/neighboursearch/balltrees/BallTreeConstructor.java
564   M /trunk/weka/core/neighboursearch/balltrees/BottomUpConstructor.java
565   M /trunk/weka/core/neighboursearch/balltrees/MedianDistanceFromArbitraryPoint.java
566   M /trunk/weka/core/neighboursearch/balltrees/MedianOfWidestDimension.java
567   M /trunk/weka/core/neighboursearch/balltrees/MiddleOutConstructor.java
568   M /trunk/weka/core/neighboursearch/balltrees/PointsClosestToFurthestChildren.java
569   M /trunk/weka/core/neighboursearch/balltrees/TopDownConstructor.java
570   M /trunk/weka/core/neighboursearch/covertrees/Stack.java
571   M /trunk/weka/core/neighboursearch/kdtrees/KDTreeNode.java
572   M /trunk/weka/core/neighboursearch/kdtrees/KDTreeNodeSplitter.java
573   M /trunk/weka/core/neighboursearch/kdtrees/KMeansInpiredMethod.java
574   M /trunk/weka/core/neighboursearch/kdtrees/MedianOfWidestDimension.java
575   M /trunk/weka/core/neighboursearch/kdtrees/MidPointOfWidestDimension.java
576   M /trunk/weka/core/neighboursearch/kdtrees/SlidingMidPointOfWidestSide.java
577   M /trunk/weka/core/parser/java_cup/Lexer.jflex
578   M /trunk/weka/core/stemmers/IteratedLovinsStemmer.java
579   M /trunk/weka/core/stemmers/LovinsStemmer.java
580   M /trunk/weka/core/stemmers/NullStemmer.java
581   M /trunk/weka/core/stemmers/SnowballStemmer.java
582   M /trunk/weka/core/stemmers/Stemmer.java
583   M /trunk/weka/core/stemmers/Stemming.java
584   M /trunk/weka/core/tokenizers/AlphabeticTokenizer.java
585   M /trunk/weka/core/tokenizers/CharacterDelimitedTokenizer.java
586   M /trunk/weka/core/tokenizers/NGramTokenizer.java
587   M /trunk/weka/core/tokenizers/Tokenizer.java
588   M /trunk/weka/core/tokenizers/WordTokenizer.java
589   M /trunk/weka/core/xml/XMLInstances.java
590   M /trunk/weka/datagenerators/ClassificationGenerator.java
591   M /trunk/weka/datagenerators/ClusterDefinition.java
592   M /trunk/weka/datagenerators/DataGenerator.java
593   M /trunk/weka/datagenerators/RegressionGenerator.java
594   M /trunk/weka/datagenerators/classifiers/classification/Agrawal.java
595   M /trunk/weka/datagenerators/classifiers/classification/BayesNet.java
596   M /trunk/weka/datagenerators/classifiers/classification/LED24.java
597   M /trunk/weka/datagenerators/classifiers/classification/RDG1.java
598   M /trunk/weka/datagenerators/classifiers/classification/RandomRBF.java
599   M /trunk/weka/datagenerators/classifiers/regression/Expression.java
600   M /trunk/weka/datagenerators/classifiers/regression/MexicanHat.java
601   M /trunk/weka/datagenerators/clusterers/BIRCHCluster.java
602   M /trunk/weka/datagenerators/clusterers/SubspaceCluster.java
603   M /trunk/weka/datagenerators/clusterers/SubspaceClusterDefinition.java
604   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver
605   M /trunk/weka/experiment/DatabaseUtils.props.mssqlserver2005
606   M /trunk/weka/experiment/DatabaseUtils.props.mysql
607   M /trunk/weka/experiment/DatabaseUtils.props.odbc
608   M /trunk/weka/experiment/DatabaseUtils.props.oracle
609   M /trunk/weka/experiment/DatabaseUtils.props.postgresql
610   M /trunk/weka/filters/CheckSource.java
611   M /trunk/weka/filters/MultiFilter.java
612   M /trunk/weka/filters/SimpleBatchFilter.java
613   M /trunk/weka/filters/SimpleFilter.java
614   M /trunk/weka/filters/SimpleStreamFilter.java
615   M /trunk/weka/filters/Sourcable.java
616   M /trunk/weka/filters/supervised/attribute/AddClassification.java
617   M /trunk/weka/filters/supervised/attribute/PLSFilter.java
618   M /trunk/weka/filters/unsupervised/attribute/AddID.java
619   M /trunk/weka/filters/unsupervised/attribute/AddValues.java
620   M /trunk/weka/filters/unsupervised/attribute/Center.java
621   M /trunk/weka/filters/unsupervised/attribute/ClassAssigner.java
622   M /trunk/weka/filters/unsupervised/attribute/InterquartileRange.java
623   M /trunk/weka/filters/unsupervised/attribute/KernelFilter.java
624   M /trunk/weka/filters/unsupervised/attribute/MultiInstanceToPropositional.java
625   M /trunk/weka/filters/unsupervised/attribute/NominalToString.java
626   M /trunk/weka/filters/unsupervised/attribute/NumericCleaner.java
627   M /trunk/weka/filters/unsupervised/attribute/NumericToNominal.java
628   M /trunk/weka/filters/unsupervised/attribute/PartitionedMultiFilter.java
629   M /trunk/weka/filters/unsupervised/attribute/PropositionalToMultiInstance.java
630   M /trunk/weka/filters/unsupervised/attribute/RELAGGS.java
631   M /trunk/weka/filters/unsupervised/attribute/Wavelet.java
632   M /trunk/weka/filters/unsupervised/instance/RemoveFrequentValues.java
633   M /trunk/weka/gui/BrowserHelper.java
634   M /trunk/weka/gui/CheckBoxList.java
635   M /trunk/weka/gui/ConverterFileChooser.java
636   M /trunk/weka/gui/GUIEditors.props
637   M /trunk/weka/gui/GenericPropertiesCreator.excludes
638   M /trunk/weka/gui/JListHelper.java
639   M /trunk/weka/gui/Main.java
640   M /trunk/weka/gui/MainMenuExtension.java
641   M /trunk/weka/gui/SimpleCLI.props
642   M /trunk/weka/gui/SimpleCLIPanel.java
643   M /trunk/weka/gui/SimpleDateFormatEditor.java
644   M /trunk/weka/gui/SortedTableModel.java
645   M /trunk/weka/gui/beans/icons/New24.gif
646   M /trunk/weka/gui/experiment/Experimenter.props
647   M /trunk/weka/gui/experiment/ExperimenterDefaults.java
648   M /trunk/weka/gui/experiment/OutputFormatDialog.java
649   M /trunk/weka/gui/explorer/DataGeneratorPanel.java
650   M /trunk/weka/gui/explorer/Explorer.props
651   M /trunk/weka/gui/explorer/ExplorerDefaults.java
652   M /trunk/weka/gui/sql/ConnectionPanel.java
653   M /trunk/weka/gui/sql/DbUtils.java
654   M /trunk/weka/gui/sql/InfoPanel.java
655   M /trunk/weka/gui/sql/InfoPanelCellRenderer.java
656   M /trunk/weka/gui/sql/QueryPanel.java
657   M /trunk/weka/gui/sql/ResultPanel.java
658   M /trunk/weka/gui/sql/ResultSetHelper.java
659   M /trunk/weka/gui/sql/ResultSetTable.java
660   M /trunk/weka/gui/sql/ResultSetTableCellRenderer.java
661   M /trunk/weka/gui/sql/ResultSetTableModel.java
662   M /trunk/weka/gui/sql/SqlViewer.java
663   M /trunk/weka/gui/sql/SqlViewerDialog.java
664   M /trunk/weka/gui/sql/event/ConnectionEvent.java
665   M /trunk/weka/gui/sql/event/ConnectionListener.java
666   M /trunk/weka/gui/sql/event/HistoryChangedEvent.java
667   M /trunk/weka/gui/sql/event/HistoryChangedListener.java
668   M /trunk/weka/gui/sql/event/QueryExecuteEvent.java
669   M /trunk/weka/gui/sql/event/QueryExecuteListener.java
670   M /trunk/weka/gui/sql/event/ResultChangedEvent.java
671   M /trunk/weka/gui/sql/event/ResultChangedListener.java
672   M /trunk/weka/gui/visualize/BMPWriter.java
673   M /trunk/weka/gui/visualize/PNGWriter.java
674   M /trunk/weka/gui/visualize/plugins/VisualizePlugin.java
675
676no longer executable (left-overs from importing files from Windows into CVS)
677------------------------------------------------------------------------
678r4559 | fracpete | 2008-10-15 11:40:25 +1300 (Wed, 15 Oct 2008) | 1 line
679Changed paths:
680   M /trunk/weka/gui/images/back.gif
681   M /trunk/weka/gui/images/empty_small.gif
682   M /trunk/weka/gui/images/error_small.gif
683   M /trunk/weka/gui/images/home.gif
684   M /trunk/weka/gui/images/information_small.gif
685   M /trunk/weka/gui/images/question_small.gif
686   M /trunk/weka/gui/images/resize.gif
687   M /trunk/weka/gui/images/weka_background.gif
688   M /trunk/weka/gui/images/weka_splash.gif
689
690no longer executable (left-overs from importing files on Windows into CVS)
691------------------------------------------------------------------------
692r4564 | fracpete | 2008-10-15 11:59:23 +1300 (Wed, 15 Oct 2008) | 1 line
693Changed paths:
694   M /trunk/weka/classifiers/trees/BFTree.java
695   M /trunk/weka/classifiers/trees/SimpleCart.java
696   M /trunk/weka/core/MathematicalExpression.java
697   M /trunk/weka/core/OptionHandlerJavadoc.java
698   M /trunk/weka/experiment/remote.policy.example
699
700no longer executable (left-overs from importing files on Windows into CVS)
701------------------------------------------------------------------------
702r4565 | mhall | 2008-10-15 15:48:26 +1300 (Wed, 15 Oct 2008) | 1 line
703Changed paths:
704   M /trunk/weka/filters/supervised/instance/SMOTE.java
705
706Fixed another setOptions bug
707------------------------------------------------------------------------
708r4567 | mhall | 2008-10-17 03:37:34 +1300 (Fri, 17 Oct 2008) | 1 line
709Changed paths:
710   M /trunk/weka/core/Environment.java
711
712Added a method to return a set of keys
713------------------------------------------------------------------------
714r4568 | mhall | 2008-10-17 03:42:48 +1300 (Fri, 17 Oct 2008) | 1 line
715Changed paths:
716   M /trunk/weka/gui/beans/FlowRunner.java
717
718Now sets an Internal.knowledgeflow.directory variable in weka.core.Environment when any of the load methods are called
719------------------------------------------------------------------------
720r4571 | mhall | 2008-10-17 07:21:36 +1300 (Fri, 17 Oct 2008) | 1 line
721Changed paths:
722   M /trunk/weka/experiment/ClassifierSplitEvaluator.java
723
724Added weighted average IR statistics
725------------------------------------------------------------------------
726r4573 | mhall | 2008-10-17 12:56:04 +1300 (Fri, 17 Oct 2008) | 1 line
727Changed paths:
728   M /trunk/weka/gui/GenericObjectEditor.java
729
730Methods that can't handle the data at all are now shown greyed out in the tree (rather than in red) and can't be selected.
731------------------------------------------------------------------------
732r4577 | mhall | 2008-10-18 08:37:26 +1300 (Sat, 18 Oct 2008) | 1 line
733Changed paths:
734   M /trunk/weka/core/converters/AbstractFileSaver.java
735
736Added support for environment variables in the prefix and directory parameters
737------------------------------------------------------------------------
738r4579 | mhall | 2008-10-18 08:58:14 +1300 (Sat, 18 Oct 2008) | 1 line
739Changed paths:
740   M /trunk/weka/gui/beans/xml/XMLBeans.java
741
742writeSaver was not always saving the directory and prefix
743------------------------------------------------------------------------
744r4585 | mhall | 2008-10-24 15:21:38 +1300 (Fri, 24 Oct 2008) | 1 line
745Changed paths:
746   M /trunk/weka/gui/GenericObjectEditor.java
747
748Fixed a bug (introduced from the last change) where you couldn't select an item if it didn't support capabilities.
749------------------------------------------------------------------------
750r4591 | mhall | 2008-10-29 12:12:09 +1300 (Wed, 29 Oct 2008) | 1 line
751Changed paths:
752   M /trunk/weka/gui/beans/Saver.java
753   M /trunk/weka/gui/beans/SaverCustomizer.java
754
755Now has an option to use just the prefix as the file name rather than prefix + relation name
756------------------------------------------------------------------------
757r4592 | mhall | 2008-10-29 12:13:16 +1300 (Wed, 29 Oct 2008) | 1 line
758Changed paths:
759   M /trunk/weka/core/converters/AbstractFileSaver.java
760
761Now checks for empty filename in setDirAndPrefix()
762------------------------------------------------------------------------
763r4602 | mhall | 2008-11-04 12:17:12 +1300 (Tue, 04 Nov 2008) | 1 line
764Changed paths:
765   M /trunk/weka/gui/beans/Classifier.java
766   M /trunk/weka/gui/beans/Filter.java
767
768Now allows for streamable filters that don't output any instances until the end of the stream (e.g. ReservoirSample)
769------------------------------------------------------------------------
770r4604 | mhall | 2008-11-04 12:20:08 +1300 (Tue, 04 Nov 2008) | 1 line
771Changed paths:
772   M /trunk/weka/filters/unsupervised/instance/ReservoirSample.java
773
774Now a StreamableFilter
775------------------------------------------------------------------------
776r4606 | mhall | 2008-11-06 09:40:58 +1300 (Thu, 06 Nov 2008) | 1 line
777Changed paths:
778   A /trunk/weka/classifiers/meta/RotationForest.java
779
780Initial import of Juan Rodriguez' implementation of Rotation Forests
781------------------------------------------------------------------------
782r4608 | fracpete | 2008-11-08 22:23:00 +1300 (Sat, 08 Nov 2008) | 1 line
783Changed paths:
784   M /trunk/weka/classifiers/rules/JRip.java
785   M /trunk/weka/classifiers/rules/RuleStats.java
786
787added cleanUp method to RuleStats to set m_Data and m_Filter to null for dramatic memory savings (thanks to Bernhard for that hint)
788------------------------------------------------------------------------
789r4611 | mhall | 2008-11-10 08:27:05 +1300 (Mon, 10 Nov 2008) | 1 line
790Changed paths:
791   M /trunk/weka/gui/GenericObjectEditor.props
792
793Added RotationForest
794------------------------------------------------------------------------
795r4612 | mhall | 2008-11-10 10:03:20 +1300 (Mon, 10 Nov 2008) | 1 line
796Changed paths:
797   M /trunk/weka/classifiers/meta/RotationForest.java
798
799Some small changes from Juan
800------------------------------------------------------------------------
801r4613 | mhall | 2008-11-10 10:05:21 +1300 (Mon, 10 Nov 2008) | 1 line
802Changed paths:
803   M /trunk/weka/attributeSelection/AttributeTransformer.java
804
805Changed interface so that implementers don't have to keep a copy of the training data in order to implement transformedData()
806------------------------------------------------------------------------
807r4614 | mhall | 2008-11-10 10:06:37 +1300 (Mon, 10 Nov 2008) | 1 line
808Changed paths:
809   M /trunk/weka/attributeSelection/RankSearch.java
810
811Changed to reflect changes to AttributeTransformer
812------------------------------------------------------------------------
813r4615 | mhall | 2008-11-10 10:07:00 +1300 (Mon, 10 Nov 2008) | 1 line
814Changed paths:
815   M /trunk/weka/attributeSelection/LatentSemanticAnalysis.java
816   M /trunk/weka/attributeSelection/PrincipalComponents.java
817
818Changed to reflect changes to AttributeTransformer and now do not keep a copy of the training data
819------------------------------------------------------------------------
820r4616 | mhall | 2008-11-10 10:09:00 +1300 (Mon, 10 Nov 2008) | 1 line
821Changed paths:
822   M /trunk/weka/filters/unsupervised/attribute/PrincipalComponents.java
823
824No longer keeps a copy of the training data
825------------------------------------------------------------------------
826r4617 | mhall | 2008-11-10 10:10:02 +1300 (Mon, 10 Nov 2008) | 1 line
827Changed paths:
828   M /trunk/weka/gui/explorer/AttributeSelectionPanel.java
829
830Changed to reflect changes to AttributeTransformer
831------------------------------------------------------------------------
832r4626 | mhall | 2008-11-10 10:38:51 +1300 (Mon, 10 Nov 2008) | 1 line
833Changed paths:
834   M /trunk/weka/classifiers/meta/RotationForest.java
835
836Juan Rodriguesz has given copyright to the University of Waikato.
837------------------------------------------------------------------------
838r4630 | mhall | 2008-11-10 13:56:50 +1300 (Mon, 10 Nov 2008) | 1 line
839Changed paths:
840   M /trunk/weka/gui/GUIChooser.java
841
842Revamped.
843------------------------------------------------------------------------
844r4631 | mhall | 2008-11-10 13:57:07 +1300 (Mon, 10 Nov 2008) | 1 line
845Changed paths:
846   M /trunk/weka/gui/Main.java
847
848Added the bayes net editor to the tools menu
849------------------------------------------------------------------------
850r4634 | mhall | 2008-11-11 07:53:39 +1300 (Tue, 11 Nov 2008) | 1 line
851Changed paths:
852   M /trunk/weka/filters/supervised/attribute/AttributeSelection.java
853
854Changed to reflect changes in AttributeTransformer
855------------------------------------------------------------------------
856r4635 | mhall | 2008-11-11 07:55:16 +1300 (Tue, 11 Nov 2008) | 1 line
857Changed paths:
858   M /trunk/weka/classifiers/bayes/net/GUI.java
859
860Changed so that the menu bar can be got via a accessor method
861------------------------------------------------------------------------
862r4637 | mhall | 2008-11-11 10:39:18 +1300 (Tue, 11 Nov 2008) | 1 line
863Changed paths:
864   M /trunk/weka/filters/unsupervised/attribute/PrincipalComponents.java
865
866Was still keeping a copy of the training data.
867------------------------------------------------------------------------
868r4639 | mhall | 2008-11-11 10:42:34 +1300 (Tue, 11 Nov 2008) | 1 line
869Changed paths:
870   M /trunk/weka/gui/experiment/AlgorithmListPanel.java
871
872Fixed weird editing algorithm editing bug (sometimes seemed to edit the wrong scheme from the list)
873------------------------------------------------------------------------
874r4641 | mhall | 2008-11-11 12:39:22 +1300 (Tue, 11 Nov 2008) | 1 line
875Changed paths:
876   M /trunk/weka/gui/GUIChooser.java
877
878Fixed menu rendering bug.
879------------------------------------------------------------------------
880r4643 | mhall | 2008-11-11 13:55:47 +1300 (Tue, 11 Nov 2008) | 1 line
881Changed paths:
882   M /trunk/weka/gui/Main.java
883
884Removed old WekaDoc link from help menu and fixed url for WekaWiki.
885------------------------------------------------------------------------
886r4646 | fracpete | 2008-11-12 09:52:00 +1300 (Wed, 12 Nov 2008) | 1 line
887Changed paths:
888   M /trunk/weka/core/converters/TextDirectoryLoader.java
889
890updated URLs
891------------------------------------------------------------------------
892r4648 | fracpete | 2008-11-12 10:10:39 +1300 (Wed, 12 Nov 2008) | 1 line
893Changed paths:
894   M /trunk/weka/core/stemmers/SnowballStemmer.java
895   M /trunk/weka/gui/GenericPropertiesCreator.props
896
897updated URLs
898------------------------------------------------------------------------
899r4662 | mhall | 2008-11-13 14:55:54 +1300 (Thu, 13 Nov 2008) | 1 line
900Changed paths:
901   A /trunk/src/main/java/weka (from /trunk/weka:4661)
902   D /trunk/weka
903
904Moving to new structure
905------------------------------------------------------------------------
906r4665 | mhall | 2008-11-13 14:59:08 +1300 (Thu, 13 Nov 2008) | 1 line
907Changed paths:
908   A /trunk/build.xml (from /trunk/src/main/java/weka/build.xml:4664)
909   D /trunk/src/main/java/weka/build.xml
910
911Moving to top level
912------------------------------------------------------------------------
913r4670 | mhall | 2008-11-13 16:21:14 +1300 (Thu, 13 Nov 2008) | 1 line
914Changed paths:
915   M /trunk/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java
916
917Now has an option to eliminate empty bins and an option to turn on equal frequency discretization. Removed unnecessary capabilities resriction
918------------------------------------------------------------------------
919r4671 | mhall | 2008-11-13 16:25:06 +1300 (Thu, 13 Nov 2008) | 1 line
920Changed paths:
921   M /trunk/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java
922
923Updated javadoc
924------------------------------------------------------------------------
925r4698 | mhall | 2008-11-14 11:39:21 +1300 (Fri, 14 Nov 2008) | 1 line
926Changed paths:
927   D /trunk/src
928   A /trunk/weka/src (from /trunk/src:4697)
929
930Move out of top level
931------------------------------------------------------------------------
932r4708 | fracpete | 2008-11-16 16:03:33 +1300 (Sun, 16 Nov 2008) | 1 line
933Changed paths:
934   A /trunk/weka/parsers.xml (from /trunk/weka/src/main/java/weka/parsers.xml:4707)
935   D /trunk/weka/src/main/java/weka/parsers.xml
936
937moved ant build file for parsers
938------------------------------------------------------------------------
939r4713 | mhall | 2008-11-17 14:55:21 +1300 (Mon, 17 Nov 2008) | 1 line
940Changed paths:
941   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToNominal.java
942
943Andreas Lof's patch for handling ranges of attributes
944------------------------------------------------------------------------
945r4716 | mhall | 2008-11-19 13:36:25 +1300 (Wed, 19 Nov 2008) | 1 line
946Changed paths:
947   A /trunk/weka/src/main/java/weka/core/logging
948   A /trunk/weka/src/main/java/weka/core/logging/ConsoleLogger.java
949   A /trunk/weka/src/main/java/weka/core/logging/FileLogger.java
950   A /trunk/weka/src/main/java/weka/core/logging/Logger.java
951   A /trunk/weka/src/main/java/weka/core/logging/Logging.props
952   A /trunk/weka/src/main/java/weka/core/logging/OutputLogger.java
953
954Peter's central logging stuff.
955------------------------------------------------------------------------
956r4717 | mhall | 2008-11-19 13:38:28 +1300 (Wed, 19 Nov 2008) | 1 line
957Changed paths:
958   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlow.java
959
960Added a call to core.logging at startup
961------------------------------------------------------------------------
962r4718 | mhall | 2008-11-19 13:39:45 +1300 (Wed, 19 Nov 2008) | 1 line
963Changed paths:
964   M /trunk/weka/src/main/java/weka/gui/GUIChooser.java
965   M /trunk/weka/src/main/java/weka/gui/LogPanel.java
966   M /trunk/weka/src/main/java/weka/gui/Main.java
967
968Now uses central logging
969------------------------------------------------------------------------
970r4719 | mhall | 2008-11-19 13:40:23 +1300 (Wed, 19 Nov 2008) | 1 line
971Changed paths:
972   M /trunk/weka/src/main/java/weka/gui/arffviewer/ArffViewer.java
973
974Now uses central logging
975------------------------------------------------------------------------
976r4720 | mhall | 2008-11-19 13:40:55 +1300 (Wed, 19 Nov 2008) | 1 line
977Changed paths:
978   M /trunk/weka/src/main/java/weka/gui/boundaryvisualizer/BoundaryVisualizer.java
979
980Now uses central logging
981------------------------------------------------------------------------
982r4721 | mhall | 2008-11-19 13:41:27 +1300 (Wed, 19 Nov 2008) | 1 line
983Changed paths:
984   M /trunk/weka/src/main/java/weka/gui/experiment/Experimenter.java
985
986Now uses central logging
987------------------------------------------------------------------------
988r4722 | mhall | 2008-11-19 13:41:57 +1300 (Wed, 19 Nov 2008) | 1 line
989Changed paths:
990   M /trunk/weka/src/main/java/weka/gui/explorer/Explorer.java
991
992Now uses central logging
993------------------------------------------------------------------------
994r4723 | mhall | 2008-11-19 13:42:20 +1300 (Wed, 19 Nov 2008) | 1 line
995Changed paths:
996   M /trunk/weka/src/main/java/weka/gui/graphvisualizer/GraphVisualizer.java
997
998Now uses central logging
999------------------------------------------------------------------------
1000r4724 | mhall | 2008-11-19 13:42:49 +1300 (Wed, 19 Nov 2008) | 1 line
1001Changed paths:
1002   M /trunk/weka/src/main/java/weka/gui/sql/SqlViewer.java
1003
1004Now uses central logging
1005------------------------------------------------------------------------
1006r4725 | mhall | 2008-11-19 13:43:18 +1300 (Wed, 19 Nov 2008) | 1 line
1007Changed paths:
1008   M /trunk/weka/src/main/java/weka/gui/treevisualizer/TreeVisualizer.java
1009
1010Now uses central logging
1011------------------------------------------------------------------------
1012r4726 | mhall | 2008-11-19 13:43:40 +1300 (Wed, 19 Nov 2008) | 1 line
1013Changed paths:
1014   M /trunk/weka/src/main/java/weka/gui/visualize/VisualizePanel.java
1015
1016Now uses central logging
1017------------------------------------------------------------------------
1018r4738 | fracpete | 2008-11-19 15:33:57 +1300 (Wed, 19 Nov 2008) | 1 line
1019Changed paths:
1020   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
1021
1022"Visualize classifier errors" now automatically selects "class" vs. "predicted class" as initial view
1023------------------------------------------------------------------------
1024r4739 | mhall | 2008-11-19 16:04:25 +1300 (Wed, 19 Nov 2008) | 1 line
1025Changed paths:
1026   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/Regression.java
1027
1028Fixed a bug where predictor terms were not being printed out. Also predictor terms were being set as the result rather than being added in to the sum.
1029------------------------------------------------------------------------
1030r4742 | fracpete | 2008-11-19 16:35:52 +1300 (Wed, 19 Nov 2008) | 1 line
1031Changed paths:
1032   M /trunk/weka/src/main/java/weka/core/PropertyPath.java
1033
1034the "find" method is now public
1035------------------------------------------------------------------------
1036r4746 | mhall | 2008-11-22 19:33:23 +1300 (Sat, 22 Nov 2008) | 1 line
1037Changed paths:
1038   M /trunk/weka/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java
1039
1040Added a capabilities constraint of a minimum of twoinstances.
1041------------------------------------------------------------------------
1042r4749 | mhall | 2008-11-22 21:47:49 +1300 (Sat, 22 Nov 2008) | 1 line
1043Changed paths:
1044   M /trunk/weka/src/main/java/weka/gui/beans/TextViewer.java
1045
1046Clear results action now actually clears all the result buffers :-)
1047------------------------------------------------------------------------
1048r4751 | mhall | 2008-11-23 12:27:34 +1300 (Sun, 23 Nov 2008) | 1 line
1049Changed paths:
1050   M /trunk/weka/src/main/java/weka/gui/visualize/PlotData2D.java
1051
1052Now has a method for setting a plot name (in html perhaps) that is suitable for use as a tool tip
1053------------------------------------------------------------------------
1054r4752 | mhall | 2008-11-23 12:28:00 +1300 (Sun, 23 Nov 2008) | 1 line
1055Changed paths:
1056   M /trunk/weka/src/main/java/weka/gui/visualize/LegendPanel.java
1057
1058Now sets tool tips for legend entries
1059------------------------------------------------------------------------
1060r4753 | mhall | 2008-11-23 12:28:43 +1300 (Sun, 23 Nov 2008) | 1 line
1061Changed paths:
1062   M /trunk/weka/src/main/java/weka/gui/visualize/VisualizePanel.java
1063
1064Clear all plots clears the legend entry as well now. Added method to switch from legend panel back to attribute bars panel.
1065------------------------------------------------------------------------
1066r4757 | mhall | 2008-11-23 12:32:24 +1300 (Sun, 23 Nov 2008) | 1 line
1067Changed paths:
1068   M /trunk/weka/src/main/java/weka/gui/beans/ModelPerformanceChart.java
1069
1070Now has user option for clearing all the plots
1071------------------------------------------------------------------------
1072r4758 | mhall | 2008-11-23 12:33:47 +1300 (Sun, 23 Nov 2008) | 1 line
1073Changed paths:
1074   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
1075
1076Now sets plot names for threshold events in html and also sets the html tool tip for each plot name.
1077------------------------------------------------------------------------
1078r4761 | mhall | 2008-11-24 13:39:29 +1300 (Mon, 24 Nov 2008) | 1 line
1079Changed paths:
1080   M /trunk/weka/src/main/java/weka/gui/beans/BatchClassifierEvent.java
1081   M /trunk/weka/src/main/java/weka/gui/beans/TestSetEvent.java
1082   M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetEvent.java
1083
1084Added a run number
1085------------------------------------------------------------------------
1086r4762 | mhall | 2008-11-24 13:41:48 +1300 (Mon, 24 Nov 2008) | 1 line
1087Changed paths:
1088   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1089   M /trunk/weka/src/main/java/weka/gui/beans/ModelPerformanceChart.java
1090   M /trunk/weka/src/main/java/weka/gui/beans/TextViewer.java
1091
1092clear all results/plots now needs confirmation from user
1093------------------------------------------------------------------------
1094r4763 | mhall | 2008-11-24 13:43:12 +1300 (Mon, 24 Nov 2008) | 1 line
1095Changed paths:
1096   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1097   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierCustomizer.java
1098
1099Now supports multiple threads of execution.
1100------------------------------------------------------------------------
1101r4767 | mhall | 2008-11-24 16:01:20 +1300 (Mon, 24 Nov 2008) | 1 line
1102Changed paths:
1103   M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java
1104
1105Modified to handle the executionSlots property in weka.gui.beans.Classifier
1106------------------------------------------------------------------------
1107r4769 | mhall | 2008-11-25 15:35:19 +1300 (Tue, 25 Nov 2008) | 1 line
1108Changed paths:
1109   M /trunk/weka/src/main/java/weka/gui/arffviewer/ArffPanel.java
1110
1111Changed so that you can now set all values of an attribute to missing using either ? or NaN
1112------------------------------------------------------------------------
1113r4771 | mhall | 2008-11-25 21:05:16 +1300 (Tue, 25 Nov 2008) | 1 line
1114Changed paths:
1115   A /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMaker.java
1116   A /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMakerBeanInfo.java
1117
1118Initial import
1119------------------------------------------------------------------------
1120r4772 | mhall | 2008-11-25 21:06:28 +1300 (Tue, 25 Nov 2008) | 1 line
1121Changed paths:
1122   A /trunk/weka/src/main/java/weka/gui/beans/icons/InstanceStreamToBatchMaker.gif
1123   A /trunk/weka/src/main/java/weka/gui/beans/icons/InstanceStreamToBatchMaker_animated.gif
1124
1125Initial import
1126------------------------------------------------------------------------
1127r4775 | mhall | 2008-11-25 21:12:09 +1300 (Tue, 25 Nov 2008) | 1 line
1128Changed paths:
1129   M /trunk/weka/src/main/java/weka/gui/beans/Beans.props
1130
1131Added InstanceStreamToBatchMaker
1132------------------------------------------------------------------------
1133r4777 | mhall | 2008-11-26 11:55:02 +1300 (Wed, 26 Nov 2008) | 1 line
1134Changed paths:
1135   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
1136
1137Fixed for incremental filters that may need to cache some instances before producing output (e.g. reservoir sampling)
1138------------------------------------------------------------------------
1139r4778 | mhall | 2008-11-26 12:12:27 +1300 (Wed, 26 Nov 2008) | 1 line
1140Changed paths:
1141   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1142
1143Fixed NPE bug when stopping execution.
1144------------------------------------------------------------------------
1145r4781 | mhall | 2008-11-28 08:26:43 +1300 (Fri, 28 Nov 2008) | 1 line
1146Changed paths:
1147   M /trunk/weka/src/main/java/weka/clusterers/XMeans.java
1148
1149Fixed bug that prevented min number of clusters being set correctly from the command line.
1150------------------------------------------------------------------------
1151r4783 | mhall | 2008-11-28 10:57:29 +1300 (Fri, 28 Nov 2008) | 1 line
1152Changed paths:
1153   M /trunk/weka/src/main/java/weka/attributeSelection/CheckAttributeSelection.java
1154
1155Now prints more useful debug info in correctSearchInitialization
1156------------------------------------------------------------------------
1157r4785 | mhall | 2008-11-28 15:38:05 +1300 (Fri, 28 Nov 2008) | 1 line
1158Changed paths:
1159   A /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java
1160
1161New status and log panel for the KnowledgeFlow
1162------------------------------------------------------------------------
1163r4786 | mhall | 2008-11-28 15:40:20 +1300 (Fri, 28 Nov 2008) | 1 line
1164Changed paths:
1165   M /trunk/weka/src/main/java/weka/gui/beans/Associator.java
1166   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1167   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
1168   M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java
1169   M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java
1170   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1171   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
1172   M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java
1173   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1174   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
1175   M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java
1176   M /trunk/weka/src/main/java/weka/gui/beans/Saver.java
1177   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java
1178
1179Updates for new log/status panel
1180------------------------------------------------------------------------
1181r4789 | mhall | 2008-11-29 08:18:51 +1300 (Sat, 29 Nov 2008) | 1 line
1182Changed paths:
1183   M /trunk/weka/src/main/java/weka/gui/LogPanel.java
1184
1185Added a new constructor.
1186------------------------------------------------------------------------
1187r4791 | fracpete | 2008-11-29 12:00:30 +1300 (Sat, 29 Nov 2008) | 5 lines
1188Changed paths:
1189   M /trunk/weka/src/main/java/weka/clusterers/OPTICS.java
1190   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI/OPTICS_Visualizer.java
1191
1192added more options to OPTICS:
1193-no-gui: for suppressing the display of the OPTICS visualizer
1194-db-output <file>: for saving the generated database to (can be viewed with the OPTICS Visualizer)
1195
1196added main method to OPTICS_Visualizer to start it up as standalone application
1197------------------------------------------------------------------------
1198r4792 | mhall | 2008-11-29 20:28:02 +1300 (Sat, 29 Nov 2008) | 1 line
1199Changed paths:
1200   M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java
1201
1202Fixed some concurrency issues
1203------------------------------------------------------------------------
1204r4793 | mhall | 2008-11-29 20:28:18 +1300 (Sat, 29 Nov 2008) | 1 line
1205Changed paths:
1206   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1207
1208Fixed some concurrency issues
1209------------------------------------------------------------------------
1210r4794 | mhall | 2008-11-29 20:29:55 +1300 (Sat, 29 Nov 2008) | 1 line
1211Changed paths:
1212   M /trunk/weka/src/main/java/weka/gui/beans/Associator.java
1213   M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java
1214
1215Fixed a minor status logging bug.
1216------------------------------------------------------------------------
1217r4795 | mhall | 2008-11-29 20:30:54 +1300 (Sat, 29 Nov 2008) | 1 line
1218Changed paths:
1219   A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationConstraints.java
1220
1221Initial import.
1222------------------------------------------------------------------------
1223r4796 | mhall | 2008-11-29 20:31:23 +1300 (Sat, 29 Nov 2008) | 1 line
1224Changed paths:
1225   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1226
1227Added support for ConfigurationConstraints
1228------------------------------------------------------------------------
1229r4797 | mhall | 2008-11-29 20:33:44 +1300 (Sat, 29 Nov 2008) | 1 line
1230Changed paths:
1231   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
1232
1233Fixed a minor status logging bug.
1234------------------------------------------------------------------------
1235r4802 | mhall | 2008-11-29 21:33:11 +1300 (Sat, 29 Nov 2008) | 1 line
1236Changed paths:
1237   M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java
1238
1239Added ability to change the background colour of a row in the status area if the message starts with either ERROR or WARNING
1240------------------------------------------------------------------------
1241r4804 | mhall | 2008-11-30 21:49:38 +1300 (Sun, 30 Nov 2008) | 1 line
1242Changed paths:
1243   M /trunk/weka/src/main/java/weka/gui/beans/Associator.java
1244   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1245   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
1246   M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java
1247   M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java
1248   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1249   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
1250   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1251   M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java
1252
1253More improvements to logging and status messages.
1254------------------------------------------------------------------------
1255r4806 | mhall | 2008-12-01 10:28:41 +1300 (Mon, 01 Dec 2008) | 1 line
1256Changed paths:
1257   M /trunk/weka/src/main/java/weka/gui/beans/Associator.java
1258   M /trunk/weka/src/main/java/weka/gui/beans/BeanCommon.java
1259   M /trunk/weka/src/main/java/weka/gui/beans/ClassAssigner.java
1260   M /trunk/weka/src/main/java/weka/gui/beans/ClassValuePicker.java
1261   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1262   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
1263   M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java
1264   M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java
1265   D /trunk/weka/src/main/java/weka/gui/beans/ConfigurationConstraints.java
1266   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1267   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
1268   M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java
1269   M /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMaker.java
1270   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1271   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
1272   M /trunk/weka/src/main/java/weka/gui/beans/MetaBean.java
1273   M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java
1274   M /trunk/weka/src/main/java/weka/gui/beans/Saver.java
1275   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java
1276   M /trunk/weka/src/main/java/weka/gui/beans/StripChart.java
1277   M /trunk/weka/src/main/java/weka/gui/beans/TestSetMaker.java
1278   M /trunk/weka/src/main/java/weka/gui/beans/TextViewer.java
1279   M /trunk/weka/src/main/java/weka/gui/beans/TrainTestSplitMaker.java
1280   M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetMaker.java
1281
1282Updated for changes to BeanCommon.
1283------------------------------------------------------------------------
1284r4809 | mhall | 2008-12-01 14:22:15 +1300 (Mon, 01 Dec 2008) | 1 line
1285Changed paths:
1286   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1287
1288Removed short delay after queueing task. Not needed.
1289------------------------------------------------------------------------
1290r4810 | mhall | 2008-12-01 14:22:43 +1300 (Mon, 01 Dec 2008) | 1 line
1291Changed paths:
1292   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
1293
1294Updated to reflect changes for multi-threaded components (e.g. Classifier)
1295------------------------------------------------------------------------
1296r4813 | mhall | 2008-12-01 16:15:04 +1300 (Mon, 01 Dec 2008) | 1 line
1297Changed paths:
1298   M /trunk/weka/src/main/java/weka/gui/beans/Associator.java
1299   M /trunk/weka/src/main/java/weka/gui/beans/ClassValuePicker.java
1300   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
1301   M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java
1302   M /trunk/weka/src/main/java/weka/gui/beans/ClustererPerformanceEvaluator.java
1303   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1304   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
1305   M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java
1306   M /trunk/weka/src/main/java/weka/gui/beans/Saver.java
1307   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java
1308   M /trunk/weka/src/main/java/weka/gui/beans/TestSetMaker.java
1309   M /trunk/weka/src/main/java/weka/gui/beans/TrainTestSplitMaker.java
1310   M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetMaker.java
1311
1312More status/log updates.
1313------------------------------------------------------------------------
1314r4814 | mhall | 2008-12-01 16:16:00 +1300 (Mon, 01 Dec 2008) | 1 line
1315Changed paths:
1316   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
1317
1318More status/log updates.
1319------------------------------------------------------------------------
1320r4817 | mhall | 2008-12-02 14:41:17 +1300 (Tue, 02 Dec 2008) | 1 line
1321Changed paths:
1322   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
1323
1324Added simple logging to the console when executed from the command line
1325------------------------------------------------------------------------
1326r4819 | mhall | 2008-12-02 15:06:08 +1300 (Tue, 02 Dec 2008) | 1 line
1327Changed paths:
1328   A /trunk/weka/src/main/java/weka/classifiers/trees/LADTree.java
1329
1330Initial import.
1331------------------------------------------------------------------------
1332r4820 | mhall | 2008-12-02 15:07:13 +1300 (Tue, 02 Dec 2008) | 1 line
1333Changed paths:
1334   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1335
1336Added LADTree.
1337------------------------------------------------------------------------
1338r4828 | fracpete | 2008-12-04 12:05:36 +1300 (Thu, 04 Dec 2008) | 1 line
1339Changed paths:
1340   M /trunk/weka/src/main/java/weka/classifiers/meta/GridSearch.java
1341
1342added the "kappa statistic" to the list of measures that one can evaluate on
1343------------------------------------------------------------------------
1344r4829 | mhall | 2008-12-05 11:18:21 +1300 (Fri, 05 Dec 2008) | 1 line
1345Changed paths:
1346   M /trunk/weka/src/main/java/weka/gui/beans/BeanInstance.java
1347   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1348
1349Changed the fonts for component labels and connection labels from monospaced to default to improve readability under Windows
1350------------------------------------------------------------------------
1351r4831 | mhall | 2008-12-07 19:48:55 +1300 (Sun, 07 Dec 2008) | 1 line
1352Changed paths:
1353   A /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1354
1355initial import of Adrian Pino's implementation of scatter search.
1356------------------------------------------------------------------------
1357r4834 | mhall | 2008-12-07 20:41:14 +1300 (Sun, 07 Dec 2008) | 1 line
1358Changed paths:
1359   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1360
1361Added SubsetByExpression to the list of unsupervised filters (was already in thel list of all filters)
1362------------------------------------------------------------------------
1363r4835 | mhall | 2008-12-07 20:43:35 +1300 (Sun, 07 Dec 2008) | 1 line
1364Changed paths:
1365   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1366
1367Added Wavelet to the list of unsupervised filters (was already in thel list of all filters)
1368------------------------------------------------------------------------
1369r4836 | mhall | 2008-12-09 11:00:06 +1300 (Tue, 09 Dec 2008) | 1 line
1370Changed paths:
1371   M /trunk/weka/src/main/java/weka/gui/beans/Saver.java
1372
1373Saver now sets io thread to null in finally block so that isBusy() will return false when no saving is occuring.
1374------------------------------------------------------------------------
1375r4838 | mhall | 2008-12-09 21:28:31 +1300 (Tue, 09 Dec 2008) | 1 line
1376Changed paths:
1377   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
1378
1379Added a general option to output the global information (synopsis) for the classifier.
1380------------------------------------------------------------------------
1381r4840 | mhall | 2008-12-09 21:41:21 +1300 (Tue, 09 Dec 2008) | 1 line
1382Changed paths:
1383   M /trunk/weka/src/main/java/weka/clusterers/ClusterEvaluation.java
1384
1385Added a general option to output the global information (synopsis) for the clusterer.
1386------------------------------------------------------------------------
1387r4842 | mhall | 2008-12-10 15:46:31 +1300 (Wed, 10 Dec 2008) | 1 line
1388Changed paths:
1389   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
1390
1391Now no longer prints classification summary and confusion matrix when -p option is selected (i.e. now more like what the book version outputs in this situation).
1392------------------------------------------------------------------------
1393r4848 | mhall | 2008-12-11 08:08:40 +1300 (Thu, 11 Dec 2008) | 1 line
1394Changed paths:
1395   M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1396
1397Adrain has given copyright to UoW.
1398------------------------------------------------------------------------
1399r4849 | mhall | 2008-12-11 08:12:31 +1300 (Thu, 11 Dec 2008) | 1 line
1400Changed paths:
1401   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1402
1403Added ScatterSearchV1
1404------------------------------------------------------------------------
1405r4852 | mhall | 2008-12-13 22:51:40 +1300 (Sat, 13 Dec 2008) | 1 line
1406Changed paths:
1407   M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java
1408
1409instanceToArray now uses sparse instance methods (faster for sparse instances now). Added replace missing values by default (can be turned off with an option).
1410------------------------------------------------------------------------
1411r4853 | fracpete | 2008-12-14 10:30:30 +1300 (Sun, 14 Dec 2008) | 1 line
1412Changed paths:
1413   M /trunk/weka/src/main/java/weka/core/converters/LibSVMLoader.java
1414
1415generates SparseInstance objects now
1416------------------------------------------------------------------------
1417r4854 | fracpete | 2008-12-14 10:30:57 +1300 (Sun, 14 Dec 2008) | 1 line
1418Changed paths:
1419   A /trunk/weka/src/main/java/weka/core/converters/SVMLightLoader.java
1420   A /trunk/weka/src/main/java/weka/core/converters/SVMLightSaver.java
1421
1422loader/saver for the svm light data format
1423------------------------------------------------------------------------
1424r4856 | mhall | 2008-12-16 10:00:10 +1300 (Tue, 16 Dec 2008) | 1 line
1425Changed paths:
1426   A /trunk/weka/src/main/java/weka/classifiers/functions/LibLINEAR.java
1427
1428Initial import of Benedikt Waldvogel's wrapper for the liblinear functions
1429------------------------------------------------------------------------
1430r4863 | mhall | 2008-12-16 15:20:48 +1300 (Tue, 16 Dec 2008) | 1 line
1431Changed paths:
1432   M /trunk/weka/src/main/java/weka/gui/GUIChooser.java
1433
1434Made the KnowledgeFlow's window a bit bigger.
1435------------------------------------------------------------------------
1436r4866 | mhall | 2008-12-16 16:01:22 +1300 (Tue, 16 Dec 2008) | 1 line
1437Changed paths:
1438   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1439
1440Added LibLINEAR
1441------------------------------------------------------------------------
1442r4899 | fracpete | 2008-12-26 14:09:05 +1300 (Fri, 26 Dec 2008) | 1 line
1443Changed paths:
1444   M /trunk/weka/src/main/java/weka/attributeSelection/LFSMethods.java
1445   M /trunk/weka/src/main/java/weka/attributeSelection/LinearForwardSelection.java
1446   M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1447   M /trunk/weka/src/main/java/weka/attributeSelection/SubsetSizeForwardSelection.java
1448   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
1449   M /trunk/weka/src/main/java/weka/classifiers/bayes/DMNBtext.java
1450   M /trunk/weka/src/main/java/weka/classifiers/bayes/blr/LaplacePriorImpl.java
1451   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/EditableBayesNet.java
1452   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/MarginCalculator.java
1453   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PrecomputedKernelMatrixKernel.java
1454   M /trunk/weka/src/main/java/weka/classifiers/meta/RegressionByDiscretization.java
1455   M /trunk/weka/src/main/java/weka/classifiers/trees/FT.java
1456   M /trunk/weka/src/main/java/weka/classifiers/trees/LADTree.java
1457   M /trunk/weka/src/main/java/weka/classifiers/trees/ft/FTtree.java
1458   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java
1459   M /trunk/weka/src/main/java/weka/clusterers/CLOPE.java
1460   M /trunk/weka/src/main/java/weka/clusterers/Clusterer.java
1461   M /trunk/weka/src/main/java/weka/core/Environment.java
1462   M /trunk/weka/src/main/java/weka/core/Instance.java
1463   M /trunk/weka/src/main/java/weka/core/Instances.java
1464   M /trunk/weka/src/main/java/weka/core/Jython.java
1465   M /trunk/weka/src/main/java/weka/core/SparseInstance.java
1466   M /trunk/weka/src/main/java/weka/core/converters/ConverterUtils.java
1467   M /trunk/weka/src/main/java/weka/core/neighboursearch/balltrees/MiddleOutConstructor.java
1468   M /trunk/weka/src/main/java/weka/core/parser/JFlex/CountEmitter.java
1469   M /trunk/weka/src/main/java/weka/core/parser/JFlex/Emitter.java
1470   M /trunk/weka/src/main/java/weka/core/parser/JFlex/HiLowEmitter.java
1471   M /trunk/weka/src/main/java/weka/core/parser/JFlex/Macros.java
1472   M /trunk/weka/src/main/java/weka/core/parser/JFlex/Out.java
1473   M /trunk/weka/src/main/java/weka/core/parser/JFlex/PackEmitter.java
1474   M /trunk/weka/src/main/java/weka/core/parser/JFlex/RegExp.java
1475   M /trunk/weka/src/main/java/weka/core/parser/JFlex/Skeleton.java
1476   M /trunk/weka/src/main/java/weka/core/parser/java_cup/emit.java
1477   M /trunk/weka/src/main/java/weka/core/parser/java_cup/lalr_item.java
1478   M /trunk/weka/src/main/java/weka/core/parser/java_cup/runtime/lr_parser.java
1479   M /trunk/weka/src/main/java/weka/core/parser/java_cup/runtime/virtual_parse_stack.java
1480   M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java
1481   M /trunk/weka/src/main/java/weka/core/xml/XStream.java
1482   M /trunk/weka/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java
1483   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToNominal.java
1484   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1485
1486fixed Javadoc documentation errors that showed up during Javadoc generation ("ant docs")
1487------------------------------------------------------------------------
1488r4901 | fracpete | 2008-12-29 18:14:52 +1300 (Mon, 29 Dec 2008) | 1 line
1489Changed paths:
1490   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/alignbottom.png
1491   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/alignleft.png
1492   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/alignright.png
1493   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/aligntop.png
1494   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/arrow-s.png
1495   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/arrow.png
1496   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/centerhorizontal.png
1497   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/centervertical.png
1498   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/copy.png
1499   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/cut.png
1500   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/help.png
1501   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/layout.png
1502   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/line-s.png
1503   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/line.png
1504   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/lines-s.png
1505   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/lines.png
1506   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/new.png
1507   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/open.png
1508   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/oval-s.png
1509   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/oval.png
1510   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/paste.png
1511   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/print.png
1512   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/rect-s.png
1513   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/rect.png
1514   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/redo.png
1515   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/rrect.png
1516   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/save.png
1517   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/select-s.png
1518   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/select.png
1519   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/spacehorizontal.png
1520   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/spacevertical.png
1521   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/undo.png
1522   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/zoomin.png
1523   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons/zoomout.png
1524
1525background is now transparent (no longer ugly grey background), using indexed PNGs with alpha channel
1526------------------------------------------------------------------------
1527r4902 | fracpete | 2008-12-29 18:15:27 +1300 (Mon, 29 Dec 2008) | 1 line
1528Changed paths:
1529   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/GUI.java
1530
1531uses now weka.gui.ConverterFileChooser instead of plain JFileChooser for loading/saving datasets
1532------------------------------------------------------------------------
1533r4910 | fracpete | 2008-12-30 15:14:04 +1300 (Tue, 30 Dec 2008) | 2 lines
1534Changed paths:
1535   M /trunk/weka/src/main/java/weka/core/converters/CSVSaver.java
1536
1537due to changes in ARFF format (output of instance weights), the Instance.toString() couldn't be used anymore to generate CSV output
1538added options to output CSV file with tab instead of comma as field separator and to specify a custom string for missing values (e.g., 999)
1539------------------------------------------------------------------------
1540r4911 | fracpete | 2008-12-30 15:15:15 +1300 (Tue, 30 Dec 2008) | 1 line
1541Changed paths:
1542   M /trunk/weka/src/main/java/weka/core/converters/AbstractFileLoader.java
1543
1544makeOptionStr and runFileLoader are now aware of loaders implementing weka.core.OptionHandler
1545------------------------------------------------------------------------
1546r4912 | fracpete | 2008-12-30 15:17:02 +1300 (Tue, 30 Dec 2008) | 1 line
1547Changed paths:
1548   M /trunk/weka/src/main/java/weka/core/converters/SerializedInstancesSaver.java
1549
1550fixed saving to streams
1551------------------------------------------------------------------------
1552r4914 | fracpete | 2008-12-30 15:18:16 +1300 (Tue, 30 Dec 2008) | 2 lines
1553Changed paths:
1554   M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java
1555
1556added options to force attributes to be nominal or string
1557added option for specifying custom string representing a missing value (e.g., 999 instead of ?)
1558------------------------------------------------------------------------
1559r4915 | fracpete | 2008-12-30 15:19:08 +1300 (Tue, 30 Dec 2008) | 1 line
1560Changed paths:
1561   M /trunk/weka/src/main/java/weka/gui/ConverterFileChooser.java
1562
1563one can now popup a GenericObjectEditor to further customize the loader/saver
1564------------------------------------------------------------------------
1565r4917 | fracpete | 2008-12-30 15:27:15 +1300 (Tue, 30 Dec 2008) | 1 line
1566Changed paths:
1567   M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java
1568   M /trunk/weka/src/main/java/weka/core/converters/CSVSaver.java
1569
1570updated Javadoc
1571------------------------------------------------------------------------
1572r4920 | mhall | 2008-12-31 16:27:46 +1300 (Wed, 31 Dec 2008) | 1 line
1573Changed paths:
1574   M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1575
1576Removed non-utf characters.
1577------------------------------------------------------------------------
1578r4922 | mhall | 2008-12-31 16:33:33 +1300 (Wed, 31 Dec 2008) | 1 line
1579Changed paths:
1580   M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1581
1582Removed non-utf characters.
1583------------------------------------------------------------------------
1584r4923 | fracpete | 2009-01-05 14:08:09 +1300 (Mon, 05 Jan 2009) | 1 line
1585Changed paths:
1586   M /trunk/weka/src/main/java/weka/core/converters/ConverterUtils.java
1587
1588fixed DataSource class when using a Loader (could end up trying to read from a closed stream)
1589------------------------------------------------------------------------
1590r4929 | mhall | 2009-01-05 21:17:25 +1300 (Mon, 05 Jan 2009) | 1 line
1591Changed paths:
1592   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
1593
1594log object was not transient causing binary serialization to fail.
1595------------------------------------------------------------------------
1596r4932 | mhall | 2009-01-05 22:16:28 +1300 (Mon, 05 Jan 2009) | 1 line
1597Changed paths:
1598   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
1599
1600Fixed a status message.
1601------------------------------------------------------------------------
1602r4935 | fracpete | 2009-01-07 16:00:18 +1300 (Wed, 07 Jan 2009) | 1 line
1603Changed paths:
1604   M /trunk/weka/src/main/java/weka/core/Instances.java
1605
1606one can now compare the headers of two files via "weka.core.Instances headers <file1> <file2>"; enables one to perform a quick test on the commandline
1607------------------------------------------------------------------------
1608r4939 | fracpete | 2009-01-11 11:29:25 +1300 (Sun, 11 Jan 2009) | 5 lines
1609Changed paths:
1610   M /trunk/weka/.classpath.default
1611   M /trunk/weka/build.xml
1612   A /trunk/weka/lib/JFlex.jar
1613   A /trunk/weka/lib/README
1614   A /trunk/weka/lib/java-cup.jar
1615   M /trunk/weka/parsers.xml
1616   M /trunk/weka/src/main/java/weka/core/MathematicalExpression.java
1617   M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Parser.cup
1618   M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Parser.java
1619   M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Scanner.java
1620   M /trunk/weka/src/main/java/weka/core/mathematicalexpression/Scanner.jflex
1621   M /trunk/weka/src/main/java/weka/core/mathematicalexpression/sym.java
1622   D /trunk/weka/src/main/java/weka/core/parser
1623   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MathExpression.java
1624   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Parser.cup
1625   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Parser.java
1626   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Scanner.java
1627   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/Scanner.jflex
1628   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression/sym.java
1629
1630added java-cup.jar and JFlex.jar to "lib" directory
1631removed package weka.core.parser
1632adapted all imports and classpaths (removing prefix "weka.core.parser.")
1633"compile" target in build.xml copies the java_cup/runtime directory of the java-cup.jar into the build/classes directory, since these classes are the only ones necessary at runtime
1634added lib/README to list versions and links of used libraries
1635------------------------------------------------------------------------
1636r4941 | fracpete | 2009-01-11 11:52:16 +1300 (Sun, 11 Jan 2009) | 1 line
1637Changed paths:
1638   M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1639
1640removed non-ascii characters
1641------------------------------------------------------------------------
1642r4949 | mhall | 2009-01-12 10:23:02 +1300 (Mon, 12 Jan 2009) | 1 line
1643Changed paths:
1644   M /trunk/weka/src/main/java/weka/gui/beans/ClassValuePicker.java
1645
1646Now clears any warning status messages once problems are resolved.
1647------------------------------------------------------------------------
1648r4951 | fracpete | 2009-01-16 08:57:55 +1300 (Fri, 16 Jan 2009) | 1 line
1649Changed paths:
1650   M /trunk/weka/src/main/java/weka/gui/sql/ResultSetHelper.java
1651
1652didn't list any data for ResultSets of type ResultSet.TYPE_FORWARD_ONLY, e.g., Sqlite
1653------------------------------------------------------------------------
1654r4953 | mhall | 2009-01-16 20:15:44 +1300 (Fri, 16 Jan 2009) | 1 line
1655Changed paths:
1656   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1657
1658Fixed nasty bug that prevented a MetaBean that had been stored in the user tab from being binary serialized when the flow was saved.
1659------------------------------------------------------------------------
1660r4954 | mhall | 2009-01-16 20:17:22 +1300 (Fri, 16 Jan 2009) | 1 line
1661Changed paths:
1662   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
1663   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1664
1665Small error/interrupted status message bug fix.
1666------------------------------------------------------------------------
1667r4960 | fracpete | 2009-01-17 13:26:25 +1300 (Sat, 17 Jan 2009) | 3 lines
1668Changed paths:
1669   M /trunk/weka/src/main/java/weka/gui/treevisualizer/TreeVisualizer.java
1670   A /trunk/weka/src/main/java/weka/gui/treevisualizer/TreeVisualizer.props
1671
1672added props file for color customization of the TreeVisualizer
1673in response to odd behavior on Mac OS X when saving tree to file:
1674https://list.scms.waikato.ac.nz/mailman/htdig/wekalist/2009-January/015661.html
1675------------------------------------------------------------------------
1676r4962 | mhall | 2009-01-20 13:54:39 +1300 (Tue, 20 Jan 2009) | 1 line
1677Changed paths:
1678   A /trunk/weka/src/main/java/weka/core/EnvironmentHandler.java
1679
1680Initial import
1681------------------------------------------------------------------------
1682r4963 | mhall | 2009-01-20 13:55:31 +1300 (Tue, 20 Jan 2009) | 1 line
1683Changed paths:
1684   M /trunk/weka/src/main/java/weka/core/Environment.java
1685
1686Changed so that clients can use either a system-wide shared set of environment variables, or a local set
1687------------------------------------------------------------------------
1688r4964 | mhall | 2009-01-20 13:56:22 +1300 (Tue, 20 Jan 2009) | 1 line
1689Changed paths:
1690   M /trunk/weka/src/main/java/weka/core/converters/AbstractFileLoader.java
1691   M /trunk/weka/src/main/java/weka/core/converters/AbstractFileSaver.java
1692
1693Altered to reflect changes to Environment.java
1694------------------------------------------------------------------------
1695r4965 | mhall | 2009-01-20 13:57:06 +1300 (Tue, 20 Jan 2009) | 1 line
1696Changed paths:
1697   M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java
1698
1699Altered to reflect changes to Environment.java
1700------------------------------------------------------------------------
1701r4966 | mhall | 2009-01-20 13:57:53 +1300 (Tue, 20 Jan 2009) | 1 line
1702Changed paths:
1703   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
1704   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1705   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java
1706
1707Altered to reflect changes to Environment.java
1708------------------------------------------------------------------------
1709r4973 | fracpete | 2009-01-21 13:45:35 +1300 (Wed, 21 Jan 2009) | 1 line
1710Changed paths:
1711   M /trunk/weka/src/main/java/weka/gui/LogWindow.java
1712
1713print-method now checks whether the object is NULL; if that's the case, it just prints the string "null" otherwise it uses the object's toString() method
1714------------------------------------------------------------------------
1715r4974 | mhall | 2009-01-21 14:21:51 +1300 (Wed, 21 Jan 2009) | 1 line
1716Changed paths:
1717   M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java
1718
1719Added Craig Bruce's implementation of the Drawable interface.
1720------------------------------------------------------------------------
1721r4976 | mhall | 2009-01-21 14:57:49 +1300 (Wed, 21 Jan 2009) | 1 line
1722Changed paths:
1723   A /trunk/weka/src/main/java/weka/attributeSelection/TabuSearch.java
1724
1725Initial import of Adrian Pino's implementation of Tabu search
1726------------------------------------------------------------------------
1727r4977 | mhall | 2009-01-21 14:58:29 +1300 (Wed, 21 Jan 2009) | 1 line
1728Changed paths:
1729   M /trunk/weka/src/main/java/weka/attributeSelection/ScatterSearchV1.java
1730
1731Fixed doc bug
1732------------------------------------------------------------------------
1733r4983 | mhall | 2009-01-23 15:02:35 +1300 (Fri, 23 Jan 2009) | 1 line
1734Changed paths:
1735   M /trunk/weka/src/main/java/weka/core/converters/AbstractFileLoader.java
1736   M /trunk/weka/src/main/java/weka/core/converters/AbstractFileSaver.java
1737   M /trunk/weka/src/main/java/weka/core/converters/ArffLoader.java
1738   M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java
1739   M /trunk/weka/src/main/java/weka/core/converters/SVMLightLoader.java
1740   M /trunk/weka/src/main/java/weka/core/converters/XRFFLoader.java
1741
1742More changes to support local environment variables
1743------------------------------------------------------------------------
1744r4984 | mhall | 2009-01-23 15:06:18 +1300 (Fri, 23 Jan 2009) | 1 line
1745Changed paths:
1746   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
1747   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
1748   M /trunk/weka/src/main/java/weka/gui/beans/Saver.java
1749   M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java
1750
1751More changes to support local environment variables
1752------------------------------------------------------------------------
1753r4992 | mhall | 2009-01-23 15:19:51 +1300 (Fri, 23 Jan 2009) | 1 line
1754Changed paths:
1755   M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java
1756
1757Doc update
1758------------------------------------------------------------------------
1759r4994 | fracpete | 2009-01-25 17:04:43 +1300 (Sun, 25 Jan 2009) | 1 line
1760Changed paths:
1761   M /trunk/weka/src/main/java/weka/core/Attribute.java
1762   M /trunk/weka/src/main/java/weka/core/Instances.java
1763
1764added method equalsHeaderMsg to weka.core.Instances and method equalsMsg to weka.core.Attribute for more details on why equality test fails
1765------------------------------------------------------------------------
1766r4995 | fracpete | 2009-01-26 11:42:14 +1300 (Mon, 26 Jan 2009) | 1 line
1767Changed paths:
1768   M /trunk/weka/src/main/java/weka/gui/graphvisualizer/GraphEdge.java
1769   M /trunk/weka/src/main/java/weka/gui/graphvisualizer/GraphNode.java
1770
1771made some members public (otherwise there's no way of accessing them outside the package)
1772------------------------------------------------------------------------
1773r4996 | fracpete | 2009-01-26 11:43:27 +1300 (Mon, 26 Jan 2009) | 1 line
1774Changed paths:
1775   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1776   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props
1777   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
1778   A /trunk/weka/src/main/java/weka/gui/visualize/plugins/GraphVisualizePlugin.java
1779   A /trunk/weka/src/main/java/weka/gui/visualize/plugins/TreeVisualizePlugin.java
1780
1781added plugin support in the Explorer/ClassifierPanel for visualizing XML BIF graphs (generated by BayesNet, for instance) and trees in GraphViz's dotty format
1782------------------------------------------------------------------------
1783r4997 | fracpete | 2009-01-26 14:52:20 +1300 (Mon, 26 Jan 2009) | 1 line
1784Changed paths:
1785   M /trunk/weka/src/main/java/weka/attributeSelection/ClassifierSubsetEval.java
1786   M /trunk/weka/src/main/java/weka/attributeSelection/LatentSemanticAnalysis.java
1787   M /trunk/weka/src/main/java/weka/attributeSelection/PrincipalComponents.java
1788   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
1789   M /trunk/weka/src/main/java/weka/classifiers/lazy/IB1.java
1790   M /trunk/weka/src/main/java/weka/classifiers/lazy/IBk.java
1791   M /trunk/weka/src/main/java/weka/classifiers/lazy/KStar.java
1792   M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java
1793   M /trunk/weka/src/main/java/weka/classifiers/rules/NNge.java
1794   M /trunk/weka/src/main/java/weka/clusterers/ClusterEvaluation.java
1795   M /trunk/weka/src/main/java/weka/core/Attribute.java
1796   M /trunk/weka/src/main/java/weka/core/CheckScheme.java
1797   M /trunk/weka/src/main/java/weka/core/Instance.java
1798   M /trunk/weka/src/main/java/weka/estimators/CheckEstimator.java
1799   M /trunk/weka/src/main/java/weka/filters/Filter.java
1800   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
1801   M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java
1802   M /trunk/weka/src/main/java/weka/gui/streams/InstanceJoiner.java
1803   M /trunk/weka/src/test/java/weka/core/converters/AbstractFileConverterTest.java
1804
1805added new Instances.equalHeadersMsg(...) method to errors message for more informative output (why the equality test failed)
1806------------------------------------------------------------------------
1807r4998 | fracpete | 2009-01-26 15:04:51 +1300 (Mon, 26 Jan 2009) | 1 line
1808Changed paths:
1809   M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java
1810
1811added "plugins" menu item for visualizing trees (only gets displayed when plugins available)
1812------------------------------------------------------------------------
1813r4999 | mhall | 2009-01-28 10:18:39 +1300 (Wed, 28 Jan 2009) | 1 line
1814Changed paths:
1815   M /trunk/weka/src/main/java/weka/gui/beans/TrainingSetMaker.java
1816
1817Stop notification was not getting reset.
1818------------------------------------------------------------------------
1819r5002 | mhall | 2009-01-29 09:29:28 +1300 (Thu, 29 Jan 2009) | 1 line
1820Changed paths:
1821   M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java
1822
1823Fixed bug that prevented LWL from running incrementally from the command line.
1824------------------------------------------------------------------------
1825r5007 | fracpete | 2009-01-29 16:31:07 +1300 (Thu, 29 Jan 2009) | 1 line
1826Changed paths:
1827   M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java
1828
1829removed unnecessary imports
1830------------------------------------------------------------------------
1831r5008 | mhall | 2009-01-30 11:35:39 +1300 (Fri, 30 Jan 2009) | 1 line
1832Changed paths:
1833   M /trunk/weka/src/main/java/weka/core/pmml/Expression.java
1834
1835Fixed typo
1836------------------------------------------------------------------------
1837r5012 | fracpete | 2009-01-30 23:22:20 +1300 (Fri, 30 Jan 2009) | 1 line
1838Changed paths:
1839   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1840   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props
1841   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
1842   A /trunk/weka/src/main/java/weka/gui/visualize/plugins/ErrorVisualizePlugin.java
1843
1844added another plugin support in the Explorer/Classify panel, this time for visualizing classification errors
1845------------------------------------------------------------------------
1846r5014 | fracpete | 2009-01-31 16:02:26 +1300 (Sat, 31 Jan 2009) | 3 lines
1847Changed paths:
1848   A /trunk/weka/src/main/java/weka/gui/visualize/InstanceInfo.java
1849   A /trunk/weka/src/main/java/weka/gui/visualize/InstanceInfoFrame.java
1850   M /trunk/weka/src/main/java/weka/gui/visualize/Plot2D.java
1851   M /trunk/weka/src/main/java/weka/gui/visualize/Visualize.props
1852
1853externalized the JFrame for displaying the instance info, moved it into its own class: weka.gui.visualized.InstanceInfoFrame
1854it is now possible to define one's own instance info frame: needs to be derived from javax.swing.JFrame and implement the interface weka.gui.visualized.InstanceInfo
1855this class then needs to be listed under property "weka.gui.visualize.Plot2D.instanceInfoFrame" in the weka/gui/visualize/Visualize.props properties file
1856------------------------------------------------------------------------
1857r5015 | fracpete | 2009-01-31 16:04:57 +1300 (Sat, 31 Jan 2009) | 1 line
1858Changed paths:
1859   M /trunk/weka/src/main/java/weka/gui/visualize/Visualize.props
1860
1861fixed badly worded comment in props file
1862------------------------------------------------------------------------
1863r5017 | mhall | 2009-01-31 20:52:27 +1300 (Sat, 31 Jan 2009) | 1 line
1864Changed paths:
1865   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1866   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMakerBeanInfo.java
1867
1868Added a parameter to allow the original ordering of the instances to be preserved (i.e. disables randomization and stratification)
1869------------------------------------------------------------------------
1870r5018 | fracpete | 2009-02-02 10:57:45 +1300 (Mon, 02 Feb 2009) | 5 lines
1871Changed paths:
1872   D /trunk/weka/src/main/java/weka/classifiers/JythonClassifier.java
1873   A /trunk/weka/src/main/java/weka/classifiers/scripting
1874   A /trunk/weka/src/main/java/weka/classifiers/scripting/GroovyClassifier.java
1875   A /trunk/weka/src/main/java/weka/classifiers/scripting/JythonClassifier.java (from /trunk/weka/src/main/java/weka/classifiers/JythonClassifier.java:5017)
1876   D /trunk/weka/src/main/java/weka/core/Jython.java
1877   D /trunk/weka/src/main/java/weka/core/JythonObject.java
1878   D /trunk/weka/src/main/java/weka/core/JythonSerializableObject.java
1879   M /trunk/weka/src/main/java/weka/core/SerializedObject.java
1880   A /trunk/weka/src/main/java/weka/core/scripting
1881   A /trunk/weka/src/main/java/weka/core/scripting/Groovy.java
1882   A /trunk/weka/src/main/java/weka/core/scripting/Jython.java (from /trunk/weka/src/main/java/weka/core/Jython.java:5017)
1883   A /trunk/weka/src/main/java/weka/core/scripting/JythonObject.java (from /trunk/weka/src/main/java/weka/core/JythonObject.java:5017)
1884   A /trunk/weka/src/main/java/weka/core/scripting/JythonSerializableObject.java (from /trunk/weka/src/main/java/weka/core/JythonSerializableObject.java:5017)
1885   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
1886   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props
1887
1888added support for Groovy http://groovy.codehaus.org/
1889moved scripting classes into sub-packages:
1890  weka.core.scripting
1891  weka.classifiers.scripting
1892added wrapper classifier for executing classifiers implemented as Groovy script: weka.classifiers.scripting.GrooyClassifier
1893------------------------------------------------------------------------
1894r5021 | mhall | 2009-02-02 15:49:00 +1300 (Mon, 02 Feb 2009) | 1 line
1895Changed paths:
1896   M /trunk/weka/src/main/java/weka/core/pmml/Apply.java
1897   M /trunk/weka/src/main/java/weka/core/pmml/DefineFunction.java
1898   M /trunk/weka/src/main/java/weka/core/pmml/DerivedFieldMetaInfo.java
1899   M /trunk/weka/src/main/java/weka/core/pmml/Discretize.java
1900   M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java
1901   M /trunk/weka/src/main/java/weka/core/pmml/NormContinuous.java
1902   M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java
1903   M /trunk/weka/src/main/java/weka/core/pmml/TransformationDictionary.java
1904
1905Now allows derived fields to reference other derived fields (as long as the referring field is defined *after* the referred field). Discretize now allows for continuous optypes (i.e. in this case, the bin values will be parsed as numbers and the resulting derived attribute will be numeric rather than nominal).
1906------------------------------------------------------------------------
1907r5023 | mhall | 2009-02-02 15:53:36 +1300 (Mon, 02 Feb 2009) | 1 line
1908Changed paths:
1909   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
1910
1911Doc update.
1912------------------------------------------------------------------------
1913r5025 | mhall | 2009-02-03 14:00:26 +1300 (Tue, 03 Feb 2009) | 1 line
1914Changed paths:
1915   M /trunk/weka/src/main/java/weka/core/pmml/FieldRef.java
1916   M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java
1917
1918Fixed bug that meant that field definitions were not being set correctly in the case of derived fields contained in local transformation that referred to other derived fields in local transformations
1919------------------------------------------------------------------------
1920r5027 | mhall | 2009-02-04 10:00:35 +1300 (Wed, 04 Feb 2009) | 1 line
1921Changed paths:
1922   M /trunk/weka/src/main/java/weka/core/pmml/NormDiscrete.java
1923
1924Now delays setting up field defs.
1925------------------------------------------------------------------------
1926r5028 | mhall | 2009-02-04 10:25:38 +1300 (Wed, 04 Feb 2009) | 1 line
1927Changed paths:
1928   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/NeuralNetwork.java
1929
1930Fixed a bug introduced by the improvements in derived fields where field definitions for inputs were not being set correctly.
1931------------------------------------------------------------------------
1932r5031 | mhall | 2009-02-04 14:01:42 +1300 (Wed, 04 Feb 2009) | 1 line
1933Changed paths:
1934   M /trunk/weka/src/main/java/weka/core/pmml/Apply.java
1935   M /trunk/weka/src/main/java/weka/core/pmml/Discretize.java
1936   M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java
1937   M /trunk/weka/src/main/java/weka/core/pmml/NormContinuous.java
1938   M /trunk/weka/src/main/java/weka/core/pmml/NormDiscrete.java
1939   M /trunk/weka/src/main/java/weka/core/pmml/TransformationDictionary.java
1940
1941Simplified the setp-up process for expressions and derived fields
1942------------------------------------------------------------------------
1943r5032 | mhall | 2009-02-04 14:02:30 +1300 (Wed, 04 Feb 2009) | 1 line
1944Changed paths:
1945   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/NeuralNetwork.java
1946
1947Simplified the setp-up process for expressions and derived fields
1948------------------------------------------------------------------------
1949r5034 | mhall | 2009-02-06 21:13:15 +1300 (Fri, 06 Feb 2009) | 1 line
1950Changed paths:
1951   M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java
1952
1953Now prints a status and log message if an exception arises during processing of an incoming event.
1954------------------------------------------------------------------------
1955r5036 | fracpete | 2009-02-07 10:35:12 +1300 (Sat, 07 Feb 2009) | 1 line
1956Changed paths:
1957   M /trunk/weka/src/main/java/weka/gui/explorer/Explorer.props
1958   M /trunk/weka/src/main/java/weka/gui/explorer/ExplorerDefaults.java
1959   M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java
1960
1961the initial directory for datasets in the Preprocesspanel of the Explorer can now be set in the weka/gui/explorer/Explorer.props file as well (property "InitialDirectory")
1962------------------------------------------------------------------------
1963r5040 | fracpete | 2009-02-07 11:03:25 +1300 (Sat, 07 Feb 2009) | 1 line
1964Changed paths:
1965   M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java
1966
1967added example to tiptext of weights property (it is a blank-separated list of weights, e.g., "1 1 1" for a 3-class problem)
1968------------------------------------------------------------------------
1969r5041 | fracpete | 2009-02-07 11:16:06 +1300 (Sat, 07 Feb 2009) | 1 line
1970Changed paths:
1971   M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java
1972
1973updated tiptext, listOptions and Javadoc in regards to -W parameter/weights property for weights for classes (wasn't very informative)
1974------------------------------------------------------------------------
1975r5043 | fracpete | 2009-02-07 12:37:53 +1300 (Sat, 07 Feb 2009) | 1 line
1976Changed paths:
1977   M /trunk/weka/src/main/java/weka/core/Instances.java
1978
1979fixed typo in equalHeadersMsg method ("=!" instead of "!=")
1980------------------------------------------------------------------------
1981r5047 | fracpete | 2009-02-07 13:01:41 +1300 (Sat, 07 Feb 2009) | 2 lines
1982Changed paths:
1983   M /trunk/weka/src/main/java/weka/filters/SimpleBatchFilter.java
1984   M /trunk/weka/src/main/java/weka/filters/SimpleStreamFilter.java
1985
1986methods input and batchFinished now correctly throw Exceptions (like in Filter base class)
1987removed try-catch-blocks that did become unnecessary in the process
1988------------------------------------------------------------------------
1989r5050 | fracpete | 2009-02-07 13:05:35 +1300 (Sat, 07 Feb 2009) | 1 line
1990Changed paths:
1991   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/AddClassification.java
1992
1993checks now whether a header is present in the serialized model file and if yes, compares it to the dataset that is to be filtered
1994------------------------------------------------------------------------
1995r5052 | fracpete | 2009-02-07 13:59:37 +1300 (Sat, 07 Feb 2009) | 1 line
1996Changed paths:
1997   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddCluster.java
1998
1999added "-serialized <file>" option to load a serialized clusterer model to be used instead of training a clustering algorithm on the first batch of data
2000------------------------------------------------------------------------
2001r5054 | fracpete | 2009-02-07 20:24:03 +1300 (Sat, 07 Feb 2009) | 1 line
2002Changed paths:
2003   M /trunk/weka/src/main/java/weka/gui/BrowserHelper.java
2004
2005added method for creating a link based on a JLabel component
2006------------------------------------------------------------------------
2007r5055 | fracpete | 2009-02-10 13:45:11 +1300 (Tue, 10 Feb 2009) | 1 line
2008Changed paths:
2009   M /trunk/weka/src/main/java/weka/core/Tee.java
2010
2011added missing print/println/write methods
2012------------------------------------------------------------------------
2013r5058 | mhall | 2009-02-13 15:51:13 +1300 (Fri, 13 Feb 2009) | 1 line
2014Changed paths:
2015   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2016   M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java
2017
2018Now allows for predicting test sets (using a pre-built classifier) that have been loaded from CSV files where all class values are missing and hence the legal values for a nominal class aren't known.
2019------------------------------------------------------------------------
2020r5059 | mhall | 2009-02-13 16:41:28 +1300 (Fri, 13 Feb 2009) | 1 line
2021Changed paths:
2022   M /trunk/weka/src/main/java/weka/gui/beans/PredictionAppender.java
2023
2024Prediction appender was re-using an array for creating the instance values in instance events! Fixed.
2025------------------------------------------------------------------------
2026r5060 | mhall | 2009-02-13 16:42:21 +1300 (Fri, 13 Feb 2009) | 1 line
2027Changed paths:
2028   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2029
2030Now clears any status/error messages fromt the log when new data arrives.
2031------------------------------------------------------------------------
2032r5063 | mhall | 2009-02-15 14:57:13 +1300 (Sun, 15 Feb 2009) | 1 line
2033Changed paths:
2034   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2035
2036Fixed bug that prevented a trained model from being used to generate predictions when a train and test set connection from separate sources are connected. Improved some status messages. Enforced the use of a ClassAssigner to set the class attribute (it used to default to the last attribute if none was set, but this was not consistent under all situations).
2037------------------------------------------------------------------------
2038r5066 | mhall | 2009-02-15 16:47:17 +1300 (Sun, 15 Feb 2009) | 1 line
2039Changed paths:
2040   A /trunk/weka/src/main/java/weka/attributeSelection/SignificanceAttributeEval.java
2041
2042Initial import.
2043------------------------------------------------------------------------
2044r5067 | mhall | 2009-02-15 16:48:32 +1300 (Sun, 15 Feb 2009) | 1 line
2045Changed paths:
2046   M /trunk/weka/src/main/java/weka/attributeSelection/SignificanceAttributeEval.java
2047
2048Added revision string
2049------------------------------------------------------------------------
2050r5072 | mhall | 2009-02-16 10:29:03 +1300 (Mon, 16 Feb 2009) | 1 line
2051Changed paths:
2052   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
2053
2054Now suppresses detailed class information when printing predictions.
2055------------------------------------------------------------------------
2056r5074 | mhall | 2009-02-18 13:49:46 +1300 (Wed, 18 Feb 2009) | 1 line
2057Changed paths:
2058   M /trunk/weka/src/main/java/weka/filters/Filter.java
2059
2060output() was calling stringFreeStructure() on the output format instances resulting in a structure that was incompatible for subsequent batches.
2061------------------------------------------------------------------------
2062r5078 | mhall | 2009-02-18 16:37:02 +1300 (Wed, 18 Feb 2009) | 1 line
2063Changed paths:
2064   M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java
2065
2066Now saves the relationNameAsFilename property for Savers
2067------------------------------------------------------------------------
2068r5079 | mhall | 2009-02-18 16:40:18 +1300 (Wed, 18 Feb 2009) | 1 line
2069Changed paths:
2070   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2071   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
2072   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
2073   M /trunk/weka/src/main/java/weka/gui/beans/LoaderCustomizer.java
2074   M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java
2075
2076FlowRunner now allows startable beans to be executed sequentially as well as in parallel (default). The order that Startable beans (i.e. data sources) in a flow are launched can be controlled by setting the name of the bean using a number as a prefix (e.g. for an ArffLoader that loads the training data, it might be called  1:LoadMyTrainingData)
2077------------------------------------------------------------------------
2078r5086 | mhall | 2009-02-23 12:31:33 +1300 (Mon, 23 Feb 2009) | 1 line
2079Changed paths:
2080   M /trunk/weka/src/main/java/weka/gui/visualize/AttributePanel.java
2081   M /trunk/weka/src/main/java/weka/gui/visualize/ClassPanel.java
2082   M /trunk/weka/src/main/java/weka/gui/visualize/Plot2D.java
2083   M /trunk/weka/src/main/java/weka/gui/visualize/VisualizePanel.java
2084
2085Now does not set any of the colours for the points, classes etc. equal to the background colour of the plot panel.
2086------------------------------------------------------------------------
2087r5088 | mhall | 2009-02-23 16:47:25 +1300 (Mon, 23 Feb 2009) | 1 line
2088Changed paths:
2089   M /trunk/weka/src/main/java/weka/experiment/InstanceQuery.java
2090
2091Added Andy Hessling's fix for problems with sqlite jdbc driver versions > v042.
2092------------------------------------------------------------------------
2093r5091 | mhall | 2009-02-24 09:49:03 +1300 (Tue, 24 Feb 2009) | 1 line
2094Changed paths:
2095   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MathExpression.java
2096
2097Fixed bug where, for SparseInstances, attributes to be ignored by the filter were getting zero'd
2098------------------------------------------------------------------------
2099r5093 | mhall | 2009-02-24 16:11:05 +1300 (Tue, 24 Feb 2009) | 1 line
2100Changed paths:
2101   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
2102
2103Added George Forman's unweighted micro and macro averaged F-measure methods.
2104------------------------------------------------------------------------
2105r5094 | mhall | 2009-02-24 16:27:40 +1300 (Tue, 24 Feb 2009) | 1 line
2106Changed paths:
2107   M /trunk/weka/src/main/java/weka/experiment/ClassifierSplitEvaluator.java
2108
2109Added support for George Forman's unweighted micro and macro averaged F-measure metrics.
2110------------------------------------------------------------------------
2111r5097 | mhall | 2009-02-25 14:21:03 +1300 (Wed, 25 Feb 2009) | 1 line
2112Changed paths:
2113   M /trunk/weka/src/main/java/weka/gui/beans/TestSetMaker.java
2114
2115A flag was not being reset after a stop caused by downstream components.
2116------------------------------------------------------------------------
2117r5098 | mhall | 2009-02-25 14:23:15 +1300 (Wed, 25 Feb 2009) | 1 line
2118Changed paths:
2119   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2120
2121Structure only TestSet events were causing an error message to be printed when a classifier had not yet been built. These are now ignored and an error is only generated if the classifier has not been trained when the actual test data arrives.
2122------------------------------------------------------------------------
2123r5102 | mhall | 2009-02-26 15:00:43 +1300 (Thu, 26 Feb 2009) | 1 line
2124Changed paths:
2125   M /trunk/weka/src/main/java/weka/core/pmml/MiningFieldMetaInfo.java
2126
2127Outlier treatment method was not getting initialized correctly, except in the default case.
2128------------------------------------------------------------------------
2129r5104 | mhall | 2009-02-26 15:07:36 +1300 (Thu, 26 Feb 2009) | 1 line
2130Changed paths:
2131   A /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java
2132
2133Initial import
2134------------------------------------------------------------------------
2135r5105 | mhall | 2009-02-26 15:09:10 +1300 (Thu, 26 Feb 2009) | 1 line
2136Changed paths:
2137   M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java
2138
2139Added support for TreeModel.
2140------------------------------------------------------------------------
2141r5116 | mhall | 2009-02-27 10:12:33 +1300 (Fri, 27 Feb 2009) | 1 line
2142Changed paths:
2143   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java
2144
2145Now only reads ScoreDistribution elements if the mining function is set to classification. TreeModel schema does not preclude ScoreDistribution elements for regression trees (but it doen't make sense to have them).
2146------------------------------------------------------------------------
2147r5117 | mhall | 2009-02-27 10:31:52 +1300 (Fri, 27 Feb 2009) | 1 line
2148Changed paths:
2149   A /trunk/weka/src/main/java/weka/core/pmml/Array.java
2150
2151Initial import.
2152------------------------------------------------------------------------
2153r5121 | mhall | 2009-02-27 20:48:53 +1300 (Fri, 27 Feb 2009) | 1 line
2154Changed paths:
2155   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
2156
2157Added SignificanceAttributeEval
2158------------------------------------------------------------------------
2159r5122 | mhall | 2009-02-27 20:53:44 +1300 (Fri, 27 Feb 2009) | 1 line
2160Changed paths:
2161   M /trunk/weka/src/main/java/weka/classifiers/trees/J48.java
2162
2163Changed m_root from private to protected
2164------------------------------------------------------------------------
2165r5126 | fracpete | 2009-03-01 17:35:28 +1300 (Sun, 01 Mar 2009) | 2 lines
2166Changed paths:
2167   M /trunk/weka/src/main/java/weka/experiment/DatabaseResultListener.java
2168   A /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.msaccess
2169   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.odbc
2170
2171running Experiments in the Experimenter now works with MS Access as well: second call to getString(4) in method "determineColumnConstraints" of DatabaseResultListener class resulted in Exception (fixed this by using local variable)
2172added sample setup for MS Access: DatabaseUtils.props.msaccess
2173------------------------------------------------------------------------
2174r5129 | mhall | 2009-03-03 09:26:36 +1300 (Tue, 03 Mar 2009) | 1 line
2175Changed paths:
2176   M /trunk/weka/src/main/java/weka/associations/ItemSet.java
2177
2178Can now handle SparseInstances. If an instance is sparse, zero's are treated in the same manner as missing values are in standard instances. This should make for a more intuitive data format for standard market basket data and allow bigger data sets to be loaded.
2179------------------------------------------------------------------------
2180r5130 | mhall | 2009-03-03 14:42:37 +1300 (Tue, 03 Mar 2009) | 1 line
2181Changed paths:
2182   M /trunk/weka/src/main/java/weka/associations/Apriori.java
2183   M /trunk/weka/src/main/java/weka/associations/AprioriItemSet.java
2184   M /trunk/weka/src/main/java/weka/associations/ItemSet.java
2185   A /trunk/weka/src/main/java/weka/associations/vote.arff
2186   A /trunk/weka/src/main/java/weka/associations/votes.arff
2187
2188Made the treatment of zeros as missing an option to maintain backwards compatibility.
2189------------------------------------------------------------------------
2190r5134 | mhall | 2009-03-04 16:27:41 +1300 (Wed, 04 Mar 2009) | 1 line
2191Changed paths:
2192   M /trunk/weka/src/main/java/weka/gui/beans/BeanCommon.java
2193   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
2194   M /trunk/weka/src/main/java/weka/gui/beans/MetaBean.java
2195
2196Removed a superfluous method from BeanCommon
2197------------------------------------------------------------------------
2198r5136 | mhall | 2009-03-04 16:36:43 +1300 (Wed, 04 Mar 2009) | 1 line
2199Changed paths:
2200   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java
2201
2202Added serial version UIDs for main and nested classes.
2203------------------------------------------------------------------------
2204r5142 | fracpete | 2009-03-05 16:27:23 +1300 (Thu, 05 Mar 2009) | 3 lines
2205Changed paths:
2206   A /trunk/weka/src/main/java/weka/gui/DocumentPrinting.java
2207   M /trunk/weka/src/main/java/weka/gui/GUIChooser.java
2208   M /trunk/weka/src/main/java/weka/gui/Main.java
2209   A /trunk/weka/src/main/java/weka/gui/ReaderToTextPane.java
2210   M /trunk/weka/src/main/java/weka/gui/SimpleCLI.java
2211   M /trunk/weka/src/main/java/weka/gui/SimpleCLIPanel.java
2212   A /trunk/weka/src/main/java/weka/gui/images/cut.gif
2213   A /trunk/weka/src/main/java/weka/gui/images/delete.gif
2214   A /trunk/weka/src/main/java/weka/gui/images/new.gif
2215   A /trunk/weka/src/main/java/weka/gui/images/paste.gif
2216   A /trunk/weka/src/main/java/weka/gui/images/print.gif
2217   A /trunk/weka/src/main/java/weka/gui/images/redo.gif
2218   A /trunk/weka/src/main/java/weka/gui/images/run.gif
2219   A /trunk/weka/src/main/java/weka/gui/images/stop.gif
2220   A /trunk/weka/src/main/java/weka/gui/scripting
2221   A /trunk/weka/src/main/java/weka/gui/scripting/FileScriptingPanel.java
2222   A /trunk/weka/src/main/java/weka/gui/scripting/Groovy.props
2223   A /trunk/weka/src/main/java/weka/gui/scripting/GroovyPanel.java
2224   A /trunk/weka/src/main/java/weka/gui/scripting/GroovyScript.java
2225   A /trunk/weka/src/main/java/weka/gui/scripting/Jython.props
2226   A /trunk/weka/src/main/java/weka/gui/scripting/JythonPanel.java
2227   A /trunk/weka/src/main/java/weka/gui/scripting/JythonScript.java
2228   A /trunk/weka/src/main/java/weka/gui/scripting/Script.java
2229   A /trunk/weka/src/main/java/weka/gui/scripting/ScriptUtils.java
2230   A /trunk/weka/src/main/java/weka/gui/scripting/ScriptingPanel.java
2231   A /trunk/weka/src/main/java/weka/gui/scripting/SyntaxDocument.java
2232   A /trunk/weka/src/main/java/weka/gui/scripting/event
2233   A /trunk/weka/src/main/java/weka/gui/scripting/event/ScriptExecutionEvent.java
2234   A /trunk/weka/src/main/java/weka/gui/scripting/event/ScriptExecutionListener.java
2235   A /trunk/weka/src/main/java/weka/gui/scripting/event/TitleUpdatedEvent.java
2236   A /trunk/weka/src/main/java/weka/gui/scripting/event/TitleUpdatedListener.java
2237   A /trunk/weka/src/main/java/weka/gui/scripting/images
2238   A /trunk/weka/src/main/java/weka/gui/scripting/images/groovy_medium.png
2239   A /trunk/weka/src/main/java/weka/gui/scripting/images/groovy_small.png
2240   A /trunk/weka/src/main/java/weka/gui/scripting/images/jython_medium.png
2241   A /trunk/weka/src/main/java/weka/gui/scripting/images/jython_small.png
2242
2243added better support for Jython/Groovy scripting
2244added GUIs with sytnax highlighting for Jython/Groovy scripting
2245SimpleCLI is now based on new scripting framework
2246------------------------------------------------------------------------
2247r5144 | fracpete | 2009-03-05 17:05:04 +1300 (Thu, 05 Mar 2009) | 4 lines
2248Changed paths:
2249   M /trunk/weka/src/main/java/weka/gui/GUIChooser.java
2250   M /trunk/weka/src/main/java/weka/gui/PropertyDialog.java
2251   M /trunk/weka/src/main/java/weka/gui/scripting/FileScriptingPanel.java
2252
2253fixed minor problems when closing the scripting windows:
2254- GUIChooser: menu item didn't get enabled again (didn't receive a WINDOW_CLOSING event)
2255- Main: closed the whole application (skipped the JInternalFrame when determining the parent frame)
2256added method for determining parent-JInternalFrame to PropertyDialog class
2257------------------------------------------------------------------------
2258r5147 | eibe | 2009-03-11 11:53:31 +1300 (Wed, 11 Mar 2009) | 1 line
2259Changed paths:
2260   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PolyKernel.java
2261
2262Bernhard's fix for memory leak.
2263------------------------------------------------------------------------
2264r5148 | mhall | 2009-03-11 12:14:27 +1300 (Wed, 11 Mar 2009) | 1 line
2265Changed paths:
2266   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
2267
2268Now implements RevisionHandler
2269------------------------------------------------------------------------
2270r5150 | mhall | 2009-03-11 14:39:16 +1300 (Wed, 11 Mar 2009) | 1 line
2271Changed paths:
2272   M /trunk/weka/src/main/java/weka/core/converters/CSVLoader.java
2273
2274Fixed bug introduced in r4914, where handling of quoted strings got deleted.
2275------------------------------------------------------------------------
2276r5152 | mhall | 2009-03-12 11:21:16 +1300 (Thu, 12 Mar 2009) | 1 line
2277Changed paths:
2278   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
2279
2280Added a 200 millisecond delay after a start point is launched (under sequential mode) before the beans are polled to see if any are busy. It is possible that the poll may complete a sweep of the beans before any manage to set their busy flags, and this could cause the next consecutive start point to get launched before the first has completed.
2281------------------------------------------------------------------------
2282r5154 | mhall | 2009-03-12 14:15:56 +1300 (Thu, 12 Mar 2009) | 1 line
2283Changed paths:
2284   M /trunk/weka/src/main/java/weka/classifiers/mi/supportVector/MIPolyKernel.java
2285
2286Added a clean() method.
2287------------------------------------------------------------------------
2288r5155 | fracpete | 2009-03-17 13:19:43 +1300 (Tue, 17 Mar 2009) | 2 lines
2289Changed paths:
2290   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Add.java
2291
2292setAttributeName(String) method no longer tries to "fix" the name by checking for single quotes/blanks, but just accepts the name as it is (if empty, "unnamed" is still used, though)
2293added Utils.unbackQuoteChars/backQuoteChars to setOptions/getOptions to correctly escape tabs etc.
2294------------------------------------------------------------------------
2295r5161 | fracpete | 2009-03-19 09:51:04 +1300 (Thu, 19 Mar 2009) | 3 lines
2296Changed paths:
2297   M /trunk/weka/src/main/java/weka/core/converters/DatabaseSaver.java
2298   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.java
2299   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props
2300   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.hsql
2301   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.msaccess
2302   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver
2303   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver2005
2304   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mysql
2305   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.odbc
2306   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.oracle
2307   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.postgresql
2308   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.sqlite3
2309
2310fixed DatabaseSaver to correctly store date attributes
2311added CREATE_DATE/DateFormat properties to DatabaseUtils.props* files, specifying the columnn type to create for date attributes and what format the date type expects (= SimpleDateFormat format string)
2312DatabaseUtils class now outputs "database driver (JDBC)" instead of "JDBC driver", since users don't seem to be familiar with the JDBC acronym
2313------------------------------------------------------------------------
2314r5162 | fracpete | 2009-03-19 10:33:54 +1300 (Thu, 19 Mar 2009) | 1 line
2315Changed paths:
2316   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
2317
2318fixed source code generation: generated classifier didn't implement getRevision() method
2319------------------------------------------------------------------------
2320r5164 | mhall | 2009-03-19 15:41:17 +1300 (Thu, 19 Mar 2009) | 1 line
2321Changed paths:
2322   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2323
2324Fixed bug that prevented Classifier from operating correctly when connected to a TrainTestSplitMaker.
2325------------------------------------------------------------------------
2326r5165 | mhall | 2009-03-19 16:05:50 +1300 (Thu, 19 Mar 2009) | 1 line
2327Changed paths:
2328   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2329
2330Fixed one other slight problem when connected to a TrainTestSplitMaker.
2331------------------------------------------------------------------------
2332r5168 | mhall | 2009-03-19 16:52:28 +1300 (Thu, 19 Mar 2009) | 1 line
2333Changed paths:
2334   M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java
2335
2336Removed TechnicalInformationHandler interface and methods. Ridor is not an implementation of the ripple down rules learner discribed in Gaines' Induct paper.
2337------------------------------------------------------------------------
2338r5171 | mhall | 2009-03-19 16:55:36 +1300 (Thu, 19 Mar 2009) | 1 line
2339Changed paths:
2340   M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java
2341
2342Forgot to update the javadoc.
2343------------------------------------------------------------------------
2344r5175 | fracpete | 2009-03-23 11:06:49 +1300 (Mon, 23 Mar 2009) | 1 line
2345Changed paths:
2346   M /trunk/weka/src/main/java/weka/gui/GenericArrayEditor.java
2347
2348fixed the "Delete" button: worked from the start of the indices and not from the rear, resulting in indices that no longer existed and throwing exceptions
2349------------------------------------------------------------------------
2350r5179 | mhall | 2009-03-23 14:08:14 +1300 (Mon, 23 Mar 2009) | 1 line
2351Changed paths:
2352   M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java
2353
2354Random shuffling of the training instances was broken.
2355------------------------------------------------------------------------
2356r5187 | mhall | 2009-03-24 11:20:55 +1300 (Tue, 24 Mar 2009) | 1 line
2357Changed paths:
2358   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
2359
2360Environment variables were not being set on the flow(s) in some cases. Internal.knowledgeflow.directory was not set correctly.
2361------------------------------------------------------------------------
2362r5192 | fracpete | 2009-03-24 20:57:16 +1300 (Tue, 24 Mar 2009) | 1 line
2363Changed paths:
2364   M /trunk/weka/src/main/java/weka/associations/Apriori.java
2365   M /trunk/weka/src/main/java/weka/associations/HotSpot.java
2366
2367fixed typo in GPL preamble
2368------------------------------------------------------------------------
2369r5193 | mhall | 2009-03-25 10:56:26 +1300 (Wed, 25 Mar 2009) | 1 line
2370Changed paths:
2371   M /trunk/weka/src/main/java/weka/classifiers/meta/OrdinalClassClassifier.java
2372
2373Eibe's addition of Schapire's ICML 2002 probability smoothing heuristic.
2374------------------------------------------------------------------------
2375r5195 | remco | 2009-03-26 14:17:49 +1300 (Thu, 26 Mar 2009) | 1 line
2376Changed paths:
2377   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/local/LocalScoreSearchAlgorithm.java
2378
2379
2380------------------------------------------------------------------------
2381r5197 | fracpete | 2009-03-30 14:52:13 +1300 (Mon, 30 Mar 2009) | 2 lines
2382Changed paths:
2383   M /trunk/weka/src/main/java/weka/classifiers/Evaluation.java
2384   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output
2385   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction
2386   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/AbstractOutput.java
2387   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/CSV.java
2388   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/HTML.java
2389   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/Null.java
2390   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/PlainText.java
2391   M /trunk/weka/src/main/java/weka/gui/GUIEditors.props
2392   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
2393   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props
2394   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
2395
2396I unified the generation of predictions in Explorer and on command-line by introducing now class hierarchy derived from weka.classifiers.evaluation.output.prediction.AbstractOutput
2397this allows the implementation of custom output generators; initially: PlainText (original format), CSV and HTML
2398------------------------------------------------------------------------
2399r5198 | mhall | 2009-03-31 14:43:47 +1300 (Tue, 31 Mar 2009) | 1 line
2400Changed paths:
2401   M /trunk/weka/src/main/java/weka/gui/WekaTaskMonitor.java
2402
2403Changed the image loading to retrieve image resources using the current class loader rather than the system class loader. This allows thing to work properly when running in an app server or as an applet.
2404------------------------------------------------------------------------
2405r5201 | fracpete | 2009-04-02 09:04:45 +1300 (Thu, 02 Apr 2009) | 1 line
2406Changed paths:
2407   M /trunk/weka/src/main/java/weka/gui/scripting/Groovy.props
2408
2409added "assert" to syntax highlighting as keyword
2410------------------------------------------------------------------------
2411r5202 | fracpete | 2009-04-03 12:01:48 +1300 (Fri, 03 Apr 2009) | 1 line
2412Changed paths:
2413   M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java
2414
2415added option -model <file>/property modelFile to output the internal libsvm to a file (using libsvm's internal format)
2416------------------------------------------------------------------------
2417r5204 | fracpete | 2009-04-03 12:17:41 +1300 (Fri, 03 Apr 2009) | 1 line
2418Changed paths:
2419   M /trunk/weka/src/main/java/weka/gui/FileEditor.java
2420
2421fixed long-standing issue with FileEditor: one closes the editor now when clicking Select or Cancel
2422------------------------------------------------------------------------
2423r5208 | remco | 2009-04-05 08:22:13 +1200 (Sun, 05 Apr 2009) | 1 line
2424Changed paths:
2425   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/BayesNetGenerator.java
2426
2427
2428------------------------------------------------------------------------
2429r5209 | mhall | 2009-04-06 11:39:03 +1200 (Mon, 06 Apr 2009) | 1 line
2430Changed paths:
2431   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
2432
2433Save a bit of memory by creating certain data structures only if needed under the current flow setup.
2434------------------------------------------------------------------------
2435r5210 | mhall | 2009-04-06 11:40:49 +1200 (Mon, 06 Apr 2009) | 1 line
2436Changed paths:
2437   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.java
2438   M /trunk/weka/src/main/java/weka/gui/explorer/AssociationsPanel.java
2439   M /trunk/weka/src/main/java/weka/gui/explorer/AttributeSelectionPanel.java
2440   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
2441   M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java
2442   M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java
2443
2444Greyed out items are now selectable (so that capabilities, more info etc. can be viewed) but Start/Apply buttons are disabled for schemes that don't meet the capabilities constraints.
2445------------------------------------------------------------------------
2446r5216 | mhall | 2009-04-07 16:32:35 +1200 (Tue, 07 Apr 2009) | 1 line
2447Changed paths:
2448   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2449
2450Blocking was not preventing test folds from being overwritten.
2451------------------------------------------------------------------------
2452r5219 | fracpete | 2009-04-08 09:32:11 +1200 (Wed, 08 Apr 2009) | 1 line
2453Changed paths:
2454   M /trunk/weka/src/main/java/weka/core/logging/FileLogger.java
2455
2456added some sanity checks (whether m_LogFile != null) to make subclassing easier
2457------------------------------------------------------------------------
2458r5223 | mhall | 2009-04-08 15:31:28 +1200 (Wed, 08 Apr 2009) | 1 line
2459Changed paths:
2460   M /trunk/weka/src/main/java/weka/gui/beans/CrossValidationFoldMaker.java
2461
2462Added a check to make sure the fold thread is not null before checking if it is still alive.
2463------------------------------------------------------------------------
2464r5224 | mhall | 2009-04-08 15:34:25 +1200 (Wed, 08 Apr 2009) | 1 line
2465Changed paths:
2466   M /trunk/weka/src/main/java/weka/gui/beans/Startable.java
2467
2468Now specifies a method to return a string describing the start action. This allows the KnowledgeFlow to display this in the contextual popup menu for a component.
2469------------------------------------------------------------------------
2470r5225 | mhall | 2009-04-08 15:37:39 +1200 (Wed, 08 Apr 2009) | 1 line
2471Changed paths:
2472   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
2473
2474Is no longer a userRequestAcceptor. Moved code for resolving environment variables in file names from enumerateRequests() to getStartMessage()
2475------------------------------------------------------------------------
2476r5226 | mhall | 2009-04-08 15:41:44 +1200 (Wed, 08 Apr 2009) | 1 line
2477Changed paths:
2478   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
2479
2480Now checks to see if a component is Startable and adds it's startMessage to the contextual popup menu. Components that are Startable or implement userRequests get started or requests executed in a separate thread. This should remove the burden of launching computationally expensive tasks in separate threads from individual components (unless, like Classifier, they launch multiple tasks in parallel).
2481------------------------------------------------------------------------
2482r5227 | mhall | 2009-04-08 15:41:59 +1200 (Wed, 08 Apr 2009) | 1 line
2483Changed paths:
2484   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2485
2486Fixed some more minor concurrency issues.
2487------------------------------------------------------------------------
2488r5228 | mhall | 2009-04-08 22:09:27 +1200 (Wed, 08 Apr 2009) | 1 line
2489Changed paths:
2490   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2491   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierCustomizer.java
2492
2493Added an option to allow blocking on the last fold of the last run rather than rejecting any further data until processing is completed.
2494------------------------------------------------------------------------
2495r5234 | mhall | 2009-04-09 12:55:53 +1200 (Thu, 09 Apr 2009) | 1 line
2496Changed paths:
2497   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2498
2499Removed a debugging output.
2500------------------------------------------------------------------------
2501r5235 | mhall | 2009-04-09 13:00:00 +1200 (Thu, 09 Apr 2009) | 1 line
2502Changed paths:
2503   M /trunk/weka/src/main/java/weka/gui/beans/xml/XMLBeans.java
2504
2505Added blockOnLastFold property for beans.Classifier.
2506------------------------------------------------------------------------
2507r5238 | fracpete | 2009-04-13 19:26:46 +1200 (Mon, 13 Apr 2009) | 4 lines
2508Changed paths:
2509   M /trunk/weka/src/main/java/weka/core/converters/DatabaseSaver.java
2510   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.java
2511   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props
2512   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.hsql
2513   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.msaccess
2514   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver
2515   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mssqlserver2005
2516   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.mysql
2517   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.odbc
2518   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.oracle
2519   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.postgresql
2520   M /trunk/weka/src/main/java/weka/experiment/DatabaseUtils.props.sqlite3
2521
2522the DatabaseSaver converter now avoids clashes of table/attribute names with database keywords
2523DatabaseUtils.props received the following two new properties:
2524  Keywords - contains all the keywords
2525  KeywordsMaskChar - the character to mask the keyword, i.e., gets appended
2526------------------------------------------------------------------------
2527r5241 | mhall | 2009-04-15 12:23:43 +1200 (Wed, 15 Apr 2009) | 1 line
2528Changed paths:
2529   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
2530
2531Now checks the start message of Startable beans and does not launch any that cannot be started (i.e. where the first character of the start message is a $).
2532------------------------------------------------------------------------
2533r5244 | mhall | 2009-04-15 14:59:06 +1200 (Wed, 15 Apr 2009) | 1 line
2534Changed paths:
2535   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
2536
2537Small fix for handling of Startable and UserRequestAcceptor.
2538------------------------------------------------------------------------
2539r5245 | fracpete | 2009-04-15 15:10:48 +1200 (Wed, 15 Apr 2009) | 2 lines
2540Changed paths:
2541   A /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/SortLabels.java
2542   A /trunk/weka/src/test/java/weka/filters/unsupervised/attribute/SortLabelsTest.java
2543
2544filter for sorting the labels of nominal attributes
2545current sort options: case-sensitive or case-insensitive
2546------------------------------------------------------------------------
2547r5246 | mhall | 2009-04-15 15:14:08 +1200 (Wed, 15 Apr 2009) | 1 line
2548Changed paths:
2549   A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationProducer.java
2550
2551Added add and remove listener methods.
2552------------------------------------------------------------------------
2553r5247 | mhall | 2009-04-15 15:21:22 +1200 (Wed, 15 Apr 2009) | 1 line
2554Changed paths:
2555   M /trunk/weka/src/main/java/weka/gui/beans/Associator.java
2556   M /trunk/weka/src/main/java/weka/gui/beans/AssociatorBeanInfo.java
2557   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2558   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierBeanInfo.java
2559   M /trunk/weka/src/main/java/weka/gui/beans/Clusterer.java
2560   M /trunk/weka/src/main/java/weka/gui/beans/ClustererBeanInfo.java
2561   M /trunk/weka/src/main/java/weka/gui/beans/Filter.java
2562   M /trunk/weka/src/main/java/weka/gui/beans/FilterBeanInfo.java
2563
2564Implementation of ConfigurationProducer and related support.
2565------------------------------------------------------------------------
2566r5254 | mhall | 2009-04-16 09:26:28 +1200 (Thu, 16 Apr 2009) | 1 line
2567Changed paths:
2568   A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationListener.java
2569
2570Initial import
2571------------------------------------------------------------------------
2572r5255 | mhall | 2009-04-16 09:27:29 +1200 (Thu, 16 Apr 2009) | 1 line
2573Changed paths:
2574   A /trunk/weka/src/main/java/weka/gui/beans/ConfigurationEvent.java
2575
2576Initial import
2577------------------------------------------------------------------------
2578r5276 | mhall | 2009-04-16 20:25:58 +1200 (Thu, 16 Apr 2009) | 1 line
2579Changed paths:
2580   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2581
2582Now only resets the executor pool on receipt of a run 1, fold 1 training set if it has been shutdown.
2583------------------------------------------------------------------------
2584r5279 | fracpete | 2009-04-17 10:03:30 +1200 (Fri, 17 Apr 2009) | 1 line
2585Changed paths:
2586   M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java
2587   M /trunk/weka/src/main/java/weka/gui/sql/SqlViewerDialog.java
2588
2589added checkbox to database dialog to enable generation of sparse data
2590------------------------------------------------------------------------
2591r5281 | eibe | 2009-04-17 11:23:32 +1200 (Fri, 17 Apr 2009) | 1 line
2592Changed paths:
2593   M /trunk/weka/src/main/java/weka/classifiers/IntervalEstimator.java
2594
2595Method renamed because it can predict multiple intervals
2596------------------------------------------------------------------------
2597r5282 | eibe | 2009-04-17 11:23:59 +1200 (Fri, 17 Apr 2009) | 1 line
2598Changed paths:
2599   M /trunk/weka/src/main/java/weka/classifiers/functions/GaussianProcesses.java
2600
2601Method renamed because it can predict multiple intervals
2602------------------------------------------------------------------------
2603r5283 | mhall | 2009-04-17 14:59:29 +1200 (Fri, 17 Apr 2009) | 1 line
2604Changed paths:
2605   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java
2606   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java
2607
2608Added an option to allow the relation name of the data used to train the incoming model to be prepended to the file name for the model.
2609------------------------------------------------------------------------
2610r5284 | mhall | 2009-04-17 14:59:53 +1200 (Fri, 17 Apr 2009) | 1 line
2611Changed paths:
2612   M /trunk/weka/src/main/java/weka/gui/beans/DataVisualizer.java
2613
2614Added a bit of a hack that allows the producer of incoming data events to specify that the DataVisualizer should connect the points with lines by prepending the relation name of the data with '__'.
2615------------------------------------------------------------------------
2616r5286 | fracpete | 2009-04-18 23:42:24 +1200 (Sat, 18 Apr 2009) | 2 lines
2617Changed paths:
2618   M /trunk/weka/src/main/java/weka/attributeSelection/GeneticSearch.java
2619
2620population size needs to be an even number
2621documentation now states this and set-method only allows even numbers as well
2622------------------------------------------------------------------------
2623r5289 | eibe | 2009-04-22 12:48:25 +1200 (Wed, 22 Apr 2009) | 1 line
2624Changed paths:
2625   M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java
2626
2627RandomTree is now much faster. Code taken originally from REPTree to avoid re-sorting of data has been removed: it is not beneficial in this case because it sorts *all* attributes before the tree is built; in the new version, only the local data for the randomly selected attributes is sorted. This also means that RandomForest is much faster (it can be as much as an order of magnitude faster on UCI datasets). The memory footprint has also been reduced. RandomTree now also has an option to perform backfitting, so that unbiased probability estimates can be obtained by backfitting a hold-out set.
2628------------------------------------------------------------------------
2629r5293 | fracpete | 2009-04-23 15:40:07 +1200 (Thu, 23 Apr 2009) | 2 lines
2630Changed paths:
2631   M /trunk/weka/src/main/java/weka/gui/scripting/Groovy.props
2632   M /trunk/weka/src/main/java/weka/gui/scripting/Jython.props
2633   M /trunk/weka/src/main/java/weka/gui/scripting/SyntaxDocument.java
2634
2635SyntaxDocument now supports case-insensitive keywords as well ("CaseSensitive" property)
2636fixed typo in props files ("BlockEndd" instead of "BlockEnd")
2637------------------------------------------------------------------------
2638r5294 | mhall | 2009-05-04 14:18:21 +1200 (Mon, 04 May 2009) | 1 line
2639Changed paths:
2640   M /trunk/weka/src/main/java/weka/classifiers/trees/SimpleCart.java
2641
2642For numeric split points, a 'clean' split point was being computed by using Math.rint() - this results in a bug where an instance that should be in the left subset actually ends up in the right subset.
2643------------------------------------------------------------------------
2644r5296 | mhall | 2009-05-04 14:39:26 +1200 (Mon, 04 May 2009) | 1 line
2645Changed paths:
2646   M /trunk/weka/src/main/java/weka/core/AttributeStats.java
2647   M /trunk/weka/src/main/java/weka/core/Instances.java
2648
2649AttributeStats now computes nominal weights as well as counts
2650------------------------------------------------------------------------
2651r5297 | mhall | 2009-05-04 14:41:48 +1200 (Mon, 04 May 2009) | 1 line
2652Changed paths:
2653   M /trunk/weka/src/main/java/weka/gui/AttributeSummaryPanel.java
2654   M /trunk/weka/src/main/java/weka/gui/AttributeVisualizationPanel.java
2655   M /trunk/weka/src/main/java/weka/gui/InstancesSummaryPanel.java
2656
2657Changes to support displaying of weights information in the PreprocessPanel's summary statistics and histogram
2658------------------------------------------------------------------------
2659r5298 | mhall | 2009-05-04 14:44:22 +1200 (Mon, 04 May 2009) | 1 line
2660Changed paths:
2661   M /trunk/weka/src/main/java/weka/gui/SetInstancesPanel.java
2662
2663Now allows the client to specify whether zero instances should be shown as 0 or ?. For loaders that can be (and are) used incrementally the number of instances is unknown after the header is read.
2664------------------------------------------------------------------------
2665r5299 | mhall | 2009-05-04 14:45:40 +1200 (Mon, 04 May 2009) | 1 line
2666Changed paths:
2667   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
2668
2669Changes to support the display of ? for the number of instances when using separate test set evaluation and an incremental loader.
2670------------------------------------------------------------------------
2671r5300 | mhall | 2009-05-06 14:49:50 +1200 (Wed, 06 May 2009) | 1 line
2672Changed paths:
2673   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2674
2675Small improvement to the checks that the isBusy() method does.
2676------------------------------------------------------------------------
2677r5305 | mhall | 2009-05-07 16:33:15 +1200 (Thu, 07 May 2009) | 1 line
2678Changed paths:
2679   M /trunk/weka/src/main/java/weka/classifiers/meta/Dagging.java
2680
2681Now randomizes the data and generates splits using Instances.testCV()
2682------------------------------------------------------------------------
2683r5309 | mhall | 2009-05-08 09:48:43 +1200 (Fri, 08 May 2009) | 1 line
2684Changed paths:
2685   M /trunk/weka/src/main/java/weka/gui/beans/Classifier.java
2686
2687Now makes sure that, when stop() is called and the executor pool is shut down, subsequent batches of data will force the creation of a new executor pool.
2688------------------------------------------------------------------------
2689r5312 | mhall | 2009-05-08 11:16:07 +1200 (Fri, 08 May 2009) | 1 line
2690Changed paths:
2691   D /trunk/weka/src/main/java/weka/classifiers/misc/MinMaxExtension.java
2692   D /trunk/weka/src/main/java/weka/classifiers/misc/OLM.java
2693   D /trunk/weka/src/main/java/weka/classifiers/misc/OSDL.java
2694   D /trunk/weka/src/main/java/weka/classifiers/misc/monotone
2695
2696Removed - implementation incorrect or unreliable.
2697------------------------------------------------------------------------
2698r5313 | mhall | 2009-05-08 11:17:12 +1200 (Fri, 08 May 2009) | 1 line
2699Changed paths:
2700   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
2701
2702Updated after the removal of monotone classifiers.
2703------------------------------------------------------------------------
2704r5318 | mhall | 2009-05-11 10:55:55 +1200 (Mon, 11 May 2009) | 1 line
2705Changed paths:
2706   M /trunk/weka/src/main/java/weka/attributeSelection/WrapperSubsetEval.java
2707
2708Added an option for specifying the evaluation metric to use. Can now choose from mae, f-measure, auc, rmse (probabilities), mae (probabilities) as well as the original error rate and rmse.
2709------------------------------------------------------------------------
2710r5321 | mhall | 2009-05-11 14:23:51 +1200 (Mon, 11 May 2009) | 1 line
2711Changed paths:
2712   M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluator.java
2713
2714Was outputting relative performance measures - fixed.
2715------------------------------------------------------------------------
2716r5324 | fracpete | 2009-05-11 23:16:45 +1200 (Mon, 11 May 2009) | 2 lines
2717Changed paths:
2718   M /trunk/weka/src/main/java/weka/gui/sql/ResultSetHelper.java
2719
2720getObject method of the ResultSet returns arrays of bytes in case of Strings, which gets displayed rather ugly in the table. checks now whether the type of the column is a string and explicitly uses the getString method in this case, otherwise the getObject method.
2721also no longer uses the ResultSet's metadata to determine the class, but it's own method (which was only used if the JDBC driver didn't support this function)
2722------------------------------------------------------------------------
2723r5327 | fracpete | 2009-05-13 10:31:18 +1200 (Wed, 13 May 2009) | 1 line
2724Changed paths:
2725   A /trunk/weka/src/main/java/weka/experiment/ExplicitTestsetResultProducer.java
2726
2727new result producer that allows the usage of explicit test sets (determines the test set based on the relation name of the training set)
2728------------------------------------------------------------------------
2729r5329 | mhall | 2009-05-13 16:45:15 +1200 (Wed, 13 May 2009) | 1 line
2730Changed paths:
2731   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45Split.java
2732
2733Added a method to return the split value for a split on a numeric attribute.
2734------------------------------------------------------------------------
2735r5330 | mhall | 2009-05-13 16:45:32 +1200 (Wed, 13 May 2009) | 1 line
2736Changed paths:
2737   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/BinC45Split.java
2738
2739Added a method to return the split value for a split on a numeric attribute.
2740------------------------------------------------------------------------
2741r5331 | mhall | 2009-05-15 10:12:36 +1200 (Fri, 15 May 2009) | 1 line
2742Changed paths:
2743   M /trunk/weka/src/main/java/weka/gui/boundaryvisualizer/BoundaryVisualizer.java
2744
2745Was not calling GenericObjectEditor.registerEditors(), so property dialogs were missing editors for complex types.
2746------------------------------------------------------------------------
2747r5333 | mhall | 2009-05-15 10:30:24 +1200 (Fri, 15 May 2009) | 1 line
2748Changed paths:
2749   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/local/TAN.java
2750
2751Now doesn't cause an exception if presented with an empty set of attributes.
2752------------------------------------------------------------------------
2753r5336 | mhall | 2009-05-17 14:28:02 +1200 (Sun, 17 May 2009) | 1 line
2754Changed paths:
2755   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.java
2756
2757Made the makeCopy() method into a static utility method.
2758------------------------------------------------------------------------
2759r5340 | mhall | 2009-05-17 15:28:56 +1200 (Sun, 17 May 2009) | 1 line
2760Changed paths:
2761   M /trunk/weka/src/main/java/weka/gui/beans/AssociatorCustomizer.java
2762   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierCustomizer.java
2763   M /trunk/weka/src/main/java/weka/gui/beans/ClustererCustomizer.java
2764   M /trunk/weka/src/main/java/weka/gui/beans/FilterCustomizer.java
2765
2766Made customizers for classifiers, clusterers, filters and associators consistent with OK and Cancel buttons that work as expected
2767------------------------------------------------------------------------
2768r5346 | fracpete | 2009-05-17 16:14:15 +1200 (Sun, 17 May 2009) | 3 lines
2769Changed paths:
2770   M /trunk/weka/src/main/java/weka/experiment/ResultMatrix.java
2771   M /trunk/weka/src/main/java/weka/experiment/ResultMatrixCSV.java
2772   M /trunk/weka/src/main/java/weka/experiment/ResultMatrixGnuPlot.java
2773   M /trunk/weka/src/main/java/weka/experiment/ResultMatrixHTML.java
2774   M /trunk/weka/src/main/java/weka/experiment/ResultMatrixLatex.java
2775   M /trunk/weka/src/main/java/weka/experiment/ResultMatrixPlainText.java
2776   M /trunk/weka/src/main/java/weka/experiment/ResultMatrixSignificance.java
2777   M /trunk/weka/src/main/java/weka/gui/GUIEditors.props
2778   M /trunk/weka/src/main/java/weka/gui/experiment/Experimenter.props
2779   M /trunk/weka/src/main/java/weka/gui/experiment/ExperimenterDefaults.java
2780   M /trunk/weka/src/main/java/weka/gui/experiment/OutputFormatDialog.java
2781   M /trunk/weka/src/main/java/weka/gui/experiment/ResultsPanel.java
2782
2783ResultMatrix classes are now implementing weka.core.OptionHandler
2784OutputFormatDialog in Experimenter offers direct manipulation of ResultMatrix class instance now, for further tweaking of parameters (e.g., turn off hard cut-off in dataset names)
2785ExperimenterDefaults allow now declaring of options for ResultMatrix class (= OutputFormat), not just classname (other default options still override the ResultMatrix options, though)
2786------------------------------------------------------------------------
2787r5349 | fracpete | 2009-05-17 16:20:17 +1200 (Sun, 17 May 2009) | 1 line
2788Changed paths:
2789   M /trunk/weka
2790   M /trunk/weka/lib
2791   M /trunk/weka/src
2792   M /trunk/weka/src/main
2793   M /trunk/weka/src/main/java
2794   M /trunk/weka/src/main/java/weka
2795   M /trunk/weka/src/main/java/weka/associations
2796   M /trunk/weka/src/main/java/weka/associations/gsp
2797   M /trunk/weka/src/main/java/weka/associations/tertius
2798   M /trunk/weka/src/main/java/weka/attributeSelection
2799   M /trunk/weka/src/main/java/weka/classifiers
2800   M /trunk/weka/src/main/java/weka/classifiers/bayes
2801   M /trunk/weka/src/main/java/weka/classifiers/bayes/blr
2802   M /trunk/weka/src/main/java/weka/classifiers/bayes/net
2803   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/estimate
2804   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/icons
2805   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search
2806   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/ci
2807   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/fixed
2808   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/global
2809   M /trunk/weka/src/main/java/weka/classifiers/bayes/net/search/local
2810   M /trunk/weka/src/main/java/weka/classifiers/evaluation
2811   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output
2812   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction
2813   M /trunk/weka/src/main/java/weka/classifiers/functions
2814   M /trunk/weka/src/main/java/weka/classifiers/functions/neural
2815   M /trunk/weka/src/main/java/weka/classifiers/functions/pace
2816   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector
2817   M /trunk/weka/src/main/java/weka/classifiers/lazy
2818   M /trunk/weka/src/main/java/weka/classifiers/lazy/kstar
2819   M /trunk/weka/src/main/java/weka/classifiers/meta
2820   M /trunk/weka/src/main/java/weka/classifiers/meta/ensembleSelection
2821   M /trunk/weka/src/main/java/weka/classifiers/meta/nestedDichotomies
2822   M /trunk/weka/src/main/java/weka/classifiers/mi
2823   M /trunk/weka/src/main/java/weka/classifiers/mi/supportVector
2824   M /trunk/weka/src/main/java/weka/classifiers/misc
2825   M /trunk/weka/src/main/java/weka/classifiers/pmml
2826   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer
2827   M /trunk/weka/src/main/java/weka/classifiers/rules
2828   M /trunk/weka/src/main/java/weka/classifiers/rules/part
2829   M /trunk/weka/src/main/java/weka/classifiers/scripting
2830   M /trunk/weka/src/main/java/weka/classifiers/trees
2831   M /trunk/weka/src/main/java/weka/classifiers/trees/adtree
2832   M /trunk/weka/src/main/java/weka/classifiers/trees/ft
2833   M /trunk/weka/src/main/java/weka/classifiers/trees/j48
2834   M /trunk/weka/src/main/java/weka/classifiers/trees/lmt
2835   M /trunk/weka/src/main/java/weka/classifiers/trees/m5
2836   M /trunk/weka/src/main/java/weka/classifiers/xml
2837   M /trunk/weka/src/main/java/weka/clusterers
2838   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan
2839   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/DataObjects
2840   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/Databases
2841   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI
2842   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI/Graphics
2843   M /trunk/weka/src/main/java/weka/clusterers/forOPTICSAndDBScan/Utils
2844   M /trunk/weka/src/main/java/weka/core
2845   M /trunk/weka/src/main/java/weka/core/converters
2846   M /trunk/weka/src/main/java/weka/core/logging
2847   M /trunk/weka/src/main/java/weka/core/mathematicalexpression
2848   M /trunk/weka/src/main/java/weka/core/matrix
2849   M /trunk/weka/src/main/java/weka/core/neighboursearch
2850   M /trunk/weka/src/main/java/weka/core/neighboursearch/balltrees
2851   M /trunk/weka/src/main/java/weka/core/neighboursearch/covertrees
2852   M /trunk/weka/src/main/java/weka/core/neighboursearch/kdtrees
2853   M /trunk/weka/src/main/java/weka/core/pmml
2854   M /trunk/weka/src/main/java/weka/core/scripting
2855   M /trunk/weka/src/main/java/weka/core/stemmers
2856   M /trunk/weka/src/main/java/weka/core/tokenizers
2857   M /trunk/weka/src/main/java/weka/core/xml
2858   M /trunk/weka/src/main/java/weka/datagenerators
2859   M /trunk/weka/src/main/java/weka/datagenerators/classifiers
2860   M /trunk/weka/src/main/java/weka/datagenerators/classifiers/classification
2861   M /trunk/weka/src/main/java/weka/datagenerators/classifiers/regression
2862   M /trunk/weka/src/main/java/weka/datagenerators/clusterers
2863   M /trunk/weka/src/main/java/weka/estimators
2864   M /trunk/weka/src/main/java/weka/experiment
2865   M /trunk/weka/src/main/java/weka/experiment/xml
2866   M /trunk/weka/src/main/java/weka/filters
2867   M /trunk/weka/src/main/java/weka/filters/supervised
2868   M /trunk/weka/src/main/java/weka/filters/supervised/attribute
2869   M /trunk/weka/src/main/java/weka/filters/supervised/instance
2870   M /trunk/weka/src/main/java/weka/filters/unsupervised
2871   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute
2872   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance
2873   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/subsetbyexpression
2874   M /trunk/weka/src/main/java/weka/gui
2875   M /trunk/weka/src/main/java/weka/gui/arffviewer
2876   M /trunk/weka/src/main/java/weka/gui/beans
2877   M /trunk/weka/src/main/java/weka/gui/beans/icons
2878   M /trunk/weka/src/main/java/weka/gui/beans/xml
2879   M /trunk/weka/src/main/java/weka/gui/boundaryvisualizer
2880   M /trunk/weka/src/main/java/weka/gui/ensembleLibraryEditor
2881   M /trunk/weka/src/main/java/weka/gui/ensembleLibraryEditor/tree
2882   M /trunk/weka/src/main/java/weka/gui/experiment
2883   M /trunk/weka/src/main/java/weka/gui/explorer
2884   M /trunk/weka/src/main/java/weka/gui/graphvisualizer
2885   M /trunk/weka/src/main/java/weka/gui/graphvisualizer/icons
2886   M /trunk/weka/src/main/java/weka/gui/images
2887   M /trunk/weka/src/main/java/weka/gui/scripting
2888   M /trunk/weka/src/main/java/weka/gui/scripting/event
2889   M /trunk/weka/src/main/java/weka/gui/scripting/images
2890   M /trunk/weka/src/main/java/weka/gui/sql
2891   M /trunk/weka/src/main/java/weka/gui/sql/event
2892   M /trunk/weka/src/main/java/weka/gui/streams
2893   M /trunk/weka/src/main/java/weka/gui/treevisualizer
2894   M /trunk/weka/src/main/java/weka/gui/visualize
2895   M /trunk/weka/src/main/java/weka/gui/visualize/plugins
2896   M /trunk/weka/src/test
2897   M /trunk/weka/src/test/java
2898   M /trunk/weka/src/test/java/weka
2899   M /trunk/weka/src/test/java/weka/associations
2900   M /trunk/weka/src/test/java/weka/attributeSelection
2901   M /trunk/weka/src/test/java/weka/classifiers
2902   M /trunk/weka/src/test/java/weka/classifiers/bayes
2903   M /trunk/weka/src/test/java/weka/classifiers/data
2904   M /trunk/weka/src/test/java/weka/classifiers/functions
2905   M /trunk/weka/src/test/java/weka/classifiers/functions/supportVector
2906   M /trunk/weka/src/test/java/weka/classifiers/lazy
2907   M /trunk/weka/src/test/java/weka/classifiers/meta
2908   M /trunk/weka/src/test/java/weka/classifiers/meta/nestedDichotomies
2909   M /trunk/weka/src/test/java/weka/classifiers/mi
2910   M /trunk/weka/src/test/java/weka/classifiers/mi/supportVector
2911   M /trunk/weka/src/test/java/weka/classifiers/misc
2912   M /trunk/weka/src/test/java/weka/classifiers/pmml
2913   M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer
2914   M /trunk/weka/src/test/java/weka/classifiers/pmml/data
2915   M /trunk/weka/src/test/java/weka/classifiers/rules
2916   M /trunk/weka/src/test/java/weka/classifiers/trees
2917   M /trunk/weka/src/test/java/weka/clusterers
2918   M /trunk/weka/src/test/java/weka/core
2919   M /trunk/weka/src/test/java/weka/core/converters
2920   M /trunk/weka/src/test/java/weka/core/neighboursearch
2921   M /trunk/weka/src/test/java/weka/core/tokenizers
2922   M /trunk/weka/src/test/java/weka/datagenerators
2923   M /trunk/weka/src/test/java/weka/datagenerators/classifiers
2924   M /trunk/weka/src/test/java/weka/datagenerators/classifiers/classification
2925   M /trunk/weka/src/test/java/weka/datagenerators/classifiers/regression
2926   M /trunk/weka/src/test/java/weka/datagenerators/clusterers
2927   M /trunk/weka/src/test/java/weka/filters
2928   M /trunk/weka/src/test/java/weka/filters/data
2929   M /trunk/weka/src/test/java/weka/filters/supervised
2930   M /trunk/weka/src/test/java/weka/filters/supervised/attribute
2931   M /trunk/weka/src/test/java/weka/filters/supervised/instance
2932   M /trunk/weka/src/test/java/weka/filters/unsupervised
2933   M /trunk/weka/src/test/java/weka/filters/unsupervised/attribute
2934   M /trunk/weka/src/test/java/weka/filters/unsupervised/instance
2935   M /trunk/weka/src/test/java/weka/test
2936   M /trunk/weka/src/test/resources
2937   M /trunk/weka/src/test/resources/wekarefs
2938   M /trunk/weka/src/test/resources/wekarefs/weka
2939   M /trunk/weka/src/test/resources/wekarefs/weka/associations
2940   M /trunk/weka/src/test/resources/wekarefs/weka/attributeSelection
2941   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers
2942   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/bayes
2943   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/functions
2944   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/functions/supportVector
2945   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/lazy
2946   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/meta
2947   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/meta/nestedDichotomies
2948   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/mi
2949   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/mi/supportVector
2950   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/misc
2951   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/pmml
2952   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/pmml/consumer
2953   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/rules
2954   M /trunk/weka/src/test/resources/wekarefs/weka/classifiers/trees
2955   M /trunk/weka/src/test/resources/wekarefs/weka/clusterers
2956   M /trunk/weka/src/test/resources/wekarefs/weka/core
2957   M /trunk/weka/src/test/resources/wekarefs/weka/core/neighboursearch
2958   M /trunk/weka/src/test/resources/wekarefs/weka/core/tokenizers
2959   M /trunk/weka/src/test/resources/wekarefs/weka/filters
2960   M /trunk/weka/src/test/resources/wekarefs/weka/filters/supervised
2961   M /trunk/weka/src/test/resources/wekarefs/weka/filters/supervised/attribute
2962   M /trunk/weka/src/test/resources/wekarefs/weka/filters/supervised/instance
2963   M /trunk/weka/src/test/resources/wekarefs/weka/filters/unsupervised
2964   M /trunk/weka/src/test/resources/wekarefs/weka/filters/unsupervised/attribute
2965   M /trunk/weka/src/test/resources/wekarefs/weka/filters/unsupervised/instance
2966
2967updated ignore patterns
2968------------------------------------------------------------------------
2969r5353 | fracpete | 2009-05-18 09:56:20 +1200 (Mon, 18 May 2009) | 1 line
2970Changed paths:
2971   M /trunk/weka/src/main/java/weka/experiment/ExplicitTestsetResultProducer.java
2972
2973fixed typo in listOptions() (and therefore Javadoc)
2974------------------------------------------------------------------------
2975r5358 | fracpete | 2009-05-19 11:26:09 +1200 (Tue, 19 May 2009) | 2 lines
2976Changed paths:
2977   M /trunk/weka/src/main/java/weka/core/Instances.java
2978   M /trunk/weka/src/main/java/weka/gui/SimpleCLIPanel.java
2979
2980removed System.exit(1) call from weka.core.Instances (bad if run from SimpleCLI)
2981SimpleCLI's ClassRunner class now trims the string array used as command-line arguments for the class's main method that is about to be executed after removing the "> file" bits (weka.core.Instances didn't like the additional two empty strings and just exited)
2982------------------------------------------------------------------------
2983r5359 | mhall | 2009-05-19 14:17:56 +1200 (Tue, 19 May 2009) | 1 line
2984Changed paths:
2985   M /trunk/weka/src/main/java/weka/core/RandomVariates.java
2986
2987Amri's fix for negative values in nextGamma().
2988------------------------------------------------------------------------
2989r5367 | fracpete | 2009-05-20 10:55:29 +1200 (Wed, 20 May 2009) | 1 line
2990Changed paths:
2991   M /trunk/weka/src/main/java/weka/gui/experiment/Experimenter.props
2992   M /trunk/weka/src/main/java/weka/gui/experiment/ExperimenterDefaults.java
2993
2994added correct setup for ResultMatrixPlainText as default output format
2995------------------------------------------------------------------------
2996r5368 | mhall | 2009-05-20 14:00:12 +1200 (Wed, 20 May 2009) | 1 line
2997Changed paths:
2998   M /trunk/weka/src/main/java/weka/core/Environment.java
2999
3000Fixed a bug that caused an infinite loop in substitute(). Now uses a TreeMap instead of a HashMap so that keys are kept in sorted order.
3001------------------------------------------------------------------------
3002r5371 | mhall | 2009-05-20 15:53:56 +1200 (Wed, 20 May 2009) | 1 line
3003Changed paths:
3004   A /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java
3005
3006Initial import
3007------------------------------------------------------------------------
3008r5373 | mhall | 2009-05-21 11:38:27 +1200 (Thu, 21 May 2009) | 1 line
3009Changed paths:
3010   A /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/EMImputation.java
3011
3012Initial import of Amri Napolitano's EM-based missing values imputation filter
3013------------------------------------------------------------------------
3014r5378 | fracpete | 2009-05-21 14:27:11 +1200 (Thu, 21 May 2009) | 1 line
3015Changed paths:
3016   M /trunk/weka/src/main/java/weka/core/ClassDiscovery.java
3017   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.java
3018
3019skips duplicate class names now
3020------------------------------------------------------------------------
3021r5380 | mhall | 2009-05-21 16:12:41 +1200 (Thu, 21 May 2009) | 1 line
3022Changed paths:
3023   M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java
3024
3025Added some more constructors.
3026------------------------------------------------------------------------
3027r5382 | mhall | 2009-05-22 14:00:11 +1200 (Fri, 22 May 2009) | 1 line
3028Changed paths:
3029   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
3030
3031Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel.
3032------------------------------------------------------------------------
3033r5383 | mhall | 2009-05-22 14:00:28 +1200 (Fri, 22 May 2009) | 1 line
3034Changed paths:
3035   M /trunk/weka/src/main/java/weka/gui/explorer/ClustererPanel.java
3036
3037Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel.
3038------------------------------------------------------------------------
3039r5384 | mhall | 2009-05-22 14:00:49 +1200 (Fri, 22 May 2009) | 1 line
3040Changed paths:
3041   M /trunk/weka/src/main/java/weka/gui/explorer/AssociationsPanel.java
3042
3043Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel.
3044------------------------------------------------------------------------
3045r5385 | mhall | 2009-05-22 14:01:04 +1200 (Fri, 22 May 2009) | 1 line
3046Changed paths:
3047   M /trunk/weka/src/main/java/weka/gui/explorer/AttributeSelectionPanel.java
3048
3049Fixed a bug where the enabled/disabled state of the start button was not being updated when a new data set was set on this panel.
3050------------------------------------------------------------------------
3051r5394 | mhall | 2009-05-25 10:25:29 +1200 (Mon, 25 May 2009) | 1 line
3052Changed paths:
3053   M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java
3054
3055Added setEnabled and setEditable methods that directly affect the combo box.
3056------------------------------------------------------------------------
3057r5396 | mhall | 2009-05-25 16:54:56 +1200 (Mon, 25 May 2009) | 1 line
3058Changed paths:
3059   M /trunk/weka/src/main/java/weka/gui/beans/KnowledgeFlowApp.java
3060   M /trunk/weka/src/main/java/weka/gui/beans/Loader.java
3061   M /trunk/weka/src/main/java/weka/gui/beans/LoaderCustomizer.java
3062   M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java
3063   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java
3064
3065Modifications to support GUI access to environment variables.
3066------------------------------------------------------------------------
3067r5398 | mhall | 2009-05-26 12:25:22 +1200 (Tue, 26 May 2009) | 1 line
3068Changed paths:
3069   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
3070
3071Added EMImputation
3072------------------------------------------------------------------------
3073r5399 | fracpete | 2009-05-26 12:52:42 +1200 (Tue, 26 May 2009) | 1 line
3074Changed paths:
3075   M /trunk/weka/src/main/java/weka/experiment/Experiment.java
3076   M /trunk/weka/src/main/java/weka/gui/experiment/SetupPanel.java
3077   M /trunk/weka/src/main/java/weka/gui/experiment/SimpleSetupPanel.java
3078
3079moved reading/writing of experiments into weka.experiment.Experiment class (reducing duplicate code)
3080------------------------------------------------------------------------
3081r5402 | mhall | 2009-05-26 14:04:05 +1200 (Tue, 26 May 2009) | 1 line
3082Changed paths:
3083   M /trunk/weka/src/main/java/weka/classifiers/functions/MultilayerPerceptron.java
3084   M /trunk/weka/src/main/java/weka/classifiers/functions/neural/NeuralConnection.java
3085   M /trunk/weka/src/main/java/weka/classifiers/functions/neural/NeuralNode.java
3086
3087When using a validation set to stop training, the weights from the last iteration performed were getting used instead of the weights corresponding to the minimal error on the validation set.
3088------------------------------------------------------------------------
3089r5406 | mhall | 2009-05-26 15:10:28 +1200 (Tue, 26 May 2009) | 1 line
3090Changed paths:
3091   M /trunk/weka/src/main/java/weka/gui/beans/LoaderCustomizer.java
3092   M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java
3093   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java
3094
3095Minor changes to layout and resizing behaviour
3096------------------------------------------------------------------------
3097r5408 | mhall | 2009-05-26 15:16:23 +1200 (Tue, 26 May 2009) | 1 line
3098Changed paths:
3099   M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java
3100
3101Another small improvement to layout.
3102------------------------------------------------------------------------
3103r5413 | fracpete | 2009-05-27 09:33:03 +1200 (Wed, 27 May 2009) | 1 line
3104Changed paths:
3105   M /trunk/weka/src/main/java/weka/gui/GUIEditors.props
3106
3107added weka.experiment.Tester
3108------------------------------------------------------------------------
3109r5415 | fracpete | 2009-05-27 09:35:20 +1200 (Wed, 27 May 2009) | 1 line
3110Changed paths:
3111   M /trunk/weka/src/main/java/weka/experiment/PairedTTester.java
3112
3113inner classes are now serializable
3114------------------------------------------------------------------------
3115r5417 | fracpete | 2009-05-27 09:57:45 +1200 (Wed, 27 May 2009) | 2 lines
3116Changed paths:
3117   M /trunk/weka/src/main/java/weka/core/converters/ConverterUtils.java
3118   A /trunk/weka/src/main/java/weka/core/converters/MatlabLoader.java
3119   A /trunk/weka/src/main/java/weka/core/converters/MatlabSaver.java
3120
3121added converters for Matlab's ASCII file format (containing a single matrix, either in single or double precision, tabs/blanks separated) - tested with Matlab 7.6
3122added Matlab/SVMLight converters to core converter lists in ConverterUtils class
3123------------------------------------------------------------------------
3124r5421 | mhall | 2009-05-27 11:02:32 +1200 (Wed, 27 May 2009) | 1 line
3125Changed paths:
3126   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
3127
3128Added the matlab loader and saver
3129------------------------------------------------------------------------
3130r5423 | mhall | 2009-05-27 12:10:14 +1200 (Wed, 27 May 2009) | 1 line
3131Changed paths:
3132   M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java
3133   M /trunk/weka/src/main/java/weka/gui/beans/SaverCustomizer.java
3134
3135More layout tweaks
3136------------------------------------------------------------------------
3137r5425 | mhall | 2009-05-27 14:28:48 +1200 (Wed, 27 May 2009) | 1 line
3138Changed paths:
3139   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.props
3140
3141Now checks the current classloader against the system classloader and returns false from useDynamic() if they are not equal. This ensures that the static GOE.props are used in systems that use a custom classloader.
3142------------------------------------------------------------------------
3143r5426 | mhall | 2009-05-27 14:29:09 +1200 (Wed, 27 May 2009) | 1 line
3144Changed paths:
3145   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.java
3146
3147Now checks the current classloader against the system classloader and returns false from useDynamic() if they are not equal. This ensures that the static GOE.props are used in systems that use a custom classloader.
3148------------------------------------------------------------------------
3149r5430 | mhall | 2009-05-27 14:52:08 +1200 (Wed, 27 May 2009) | 1 line
3150Changed paths:
3151   M /trunk/weka/src/main/java/weka/gui/GenericPropertiesCreator.java
3152
3153Now outputs a message to the console if dynamic classloading can't be used due to non-system classloader.
3154------------------------------------------------------------------------
3155r5433 | mhall | 2009-05-27 15:32:47 +1200 (Wed, 27 May 2009) | 1 line
3156Changed paths:
3157   D /trunk/weka/src/main/java/weka/classifiers/functions/SVMreg.java
3158
3159Renamed to SMOreg; original SMOreg deleted.
3160------------------------------------------------------------------------
3161r5434 | mhall | 2009-05-27 15:34:15 +1200 (Wed, 27 May 2009) | 1 line
3162Changed paths:
3163   M /trunk/weka/src/main/java/weka/classifiers/functions/SMOreg.java
3164   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/RegOptimizer.java
3165
3166Replaced by Remco's SVMreg. RegOptimizer updated to reflect the name change.
3167------------------------------------------------------------------------
3168r5437 | mhall | 2009-05-27 15:38:50 +1200 (Wed, 27 May 2009) | 1 line
3169Changed paths:
3170   M /trunk/weka/src/main/java/weka/gui/GenericObjectEditor.props
3171
3172Updated to reflect the renaming of SVMreg to SMOreg.
3173------------------------------------------------------------------------
3174r5443 | mhall | 2009-05-28 16:06:00 +1200 (Thu, 28 May 2009) | 1 line
3175Changed paths:
3176   M /trunk/weka/src/main/java/weka/core/Capabilities.java
3177
3178Added enableAll and disableAll methods.
3179------------------------------------------------------------------------
3180r5444 | mhall | 2009-05-28 16:24:29 +1200 (Thu, 28 May 2009) | 1 line
3181Changed paths:
3182   M /trunk/weka/src/main/java/weka/associations/Apriori.java
3183   M /trunk/weka/src/main/java/weka/associations/FilteredAssociator.java
3184   M /trunk/weka/src/main/java/weka/associations/GeneralizedSequentialPatterns.java
3185   M /trunk/weka/src/main/java/weka/associations/HotSpot.java
3186   M /trunk/weka/src/main/java/weka/associations/PredictiveApriori.java
3187   M /trunk/weka/src/main/java/weka/associations/Tertius.java
3188
3189getCapabilities() now disables all capabilities before enabling individual ones.
3190------------------------------------------------------------------------
3191r5445 | mhall | 2009-05-28 16:25:07 +1200 (Thu, 28 May 2009) | 1 line
3192Changed paths:
3193   M /trunk/weka/src/main/java/weka/associations/AbstractAssociator.java
3194
3195Now has maximally permissive capabilities as default.
3196------------------------------------------------------------------------
3197r5446 | mhall | 2009-05-28 16:38:39 +1200 (Thu, 28 May 2009) | 1 line
3198Changed paths:
3199   M /trunk/weka/src/main/java/weka/attributeSelection/ASEvaluation.java
3200
3201Now has maximally permissive capabilities as default.
3202------------------------------------------------------------------------
3203r5447 | mhall | 2009-05-28 16:41:44 +1200 (Thu, 28 May 2009) | 1 line
3204Changed paths:
3205   M /trunk/weka/src/main/java/weka/attributeSelection/CfsSubsetEval.java
3206   M /trunk/weka/src/main/java/weka/attributeSelection/ChiSquaredAttributeEval.java
3207   M /trunk/weka/src/main/java/weka/attributeSelection/ClassifierSubsetEval.java
3208   M /trunk/weka/src/main/java/weka/attributeSelection/ConsistencySubsetEval.java
3209   M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveASEvaluation.java
3210   M /trunk/weka/src/main/java/weka/attributeSelection/FilteredAttributeEval.java
3211   M /trunk/weka/src/main/java/weka/attributeSelection/FilteredSubsetEval.java
3212   M /trunk/weka/src/main/java/weka/attributeSelection/GainRatioAttributeEval.java
3213   M /trunk/weka/src/main/java/weka/attributeSelection/InfoGainAttributeEval.java
3214   M /trunk/weka/src/main/java/weka/attributeSelection/LatentSemanticAnalysis.java
3215   M /trunk/weka/src/main/java/weka/attributeSelection/OneRAttributeEval.java
3216   M /trunk/weka/src/main/java/weka/attributeSelection/PrincipalComponents.java
3217   M /trunk/weka/src/main/java/weka/attributeSelection/ReliefFAttributeEval.java
3218   M /trunk/weka/src/main/java/weka/attributeSelection/SignificanceAttributeEval.java
3219   M /trunk/weka/src/main/java/weka/attributeSelection/SymmetricalUncertAttributeEval.java
3220   M /trunk/weka/src/main/java/weka/attributeSelection/SymmetricalUncertAttributeSetEval.java
3221   M /trunk/weka/src/main/java/weka/attributeSelection/WrapperSubsetEval.java
3222
3223getCapabilities() now disables all capabilities before enabling individual ones.
3224------------------------------------------------------------------------
3225r5448 | mhall | 2009-05-29 15:12:00 +1200 (Fri, 29 May 2009) | 1 line
3226Changed paths:
3227   M /trunk/weka/src/main/java/weka/classifiers/bayes/AODE.java
3228   M /trunk/weka/src/main/java/weka/classifiers/bayes/AODEsr.java
3229   M /trunk/weka/src/main/java/weka/classifiers/bayes/BayesNet.java
3230   M /trunk/weka/src/main/java/weka/classifiers/bayes/BayesianLogisticRegression.java
3231   M /trunk/weka/src/main/java/weka/classifiers/bayes/ComplementNaiveBayes.java
3232   M /trunk/weka/src/main/java/weka/classifiers/bayes/DMNBtext.java
3233   M /trunk/weka/src/main/java/weka/classifiers/bayes/HNB.java
3234   M /trunk/weka/src/main/java/weka/classifiers/bayes/NaiveBayes.java
3235   M /trunk/weka/src/main/java/weka/classifiers/bayes/NaiveBayesMultinomial.java
3236   M /trunk/weka/src/main/java/weka/classifiers/bayes/NaiveBayesSimple.java
3237   M /trunk/weka/src/main/java/weka/classifiers/bayes/WAODE.java
3238
3239getCapabilities() now disables all capabilities before enabling individual ones.
3240------------------------------------------------------------------------
3241r5449 | mhall | 2009-05-29 15:35:25 +1200 (Fri, 29 May 2009) | 1 line
3242Changed paths:
3243   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/Kernel.java
3244
3245Now has maximally permissive capabilities as default and default implementation of RevisionHandler.
3246------------------------------------------------------------------------
3247r5450 | mhall | 2009-05-29 15:35:55 +1200 (Fri, 29 May 2009) | 1 line
3248Changed paths:
3249   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PolyKernel.java
3250   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/PrecomputedKernelMatrixKernel.java
3251   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/Puk.java
3252   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/RBFKernel.java
3253   M /trunk/weka/src/main/java/weka/classifiers/functions/supportVector/StringKernel.java
3254
3255getCapabilities() now disables all capabilities before enabling individual ones.
3256------------------------------------------------------------------------
3257r5451 | mhall | 2009-05-29 15:37:31 +1200 (Fri, 29 May 2009) | 1 line
3258Changed paths:
3259   M /trunk/weka/src/main/java/weka/classifiers/functions/IsotonicRegression.java
3260   M /trunk/weka/src/main/java/weka/classifiers/functions/LeastMedSq.java
3261   M /trunk/weka/src/main/java/weka/classifiers/functions/LibLINEAR.java
3262   M /trunk/weka/src/main/java/weka/classifiers/functions/LibSVM.java
3263   M /trunk/weka/src/main/java/weka/classifiers/functions/LinearRegression.java
3264   M /trunk/weka/src/main/java/weka/classifiers/functions/Logistic.java
3265   M /trunk/weka/src/main/java/weka/classifiers/functions/MultilayerPerceptron.java
3266   M /trunk/weka/src/main/java/weka/classifiers/functions/PLSClassifier.java
3267   M /trunk/weka/src/main/java/weka/classifiers/functions/PaceRegression.java
3268   M /trunk/weka/src/main/java/weka/classifiers/functions/SimpleLinearRegression.java
3269   M /trunk/weka/src/main/java/weka/classifiers/functions/SimpleLogistic.java
3270   M /trunk/weka/src/main/java/weka/classifiers/functions/VotedPerceptron.java
3271   M /trunk/weka/src/main/java/weka/classifiers/functions/Winnow.java
3272
3273getCapabilities() now disables all capabilities before enabling individual ones.
3274------------------------------------------------------------------------
3275r5452 | mhall | 2009-05-29 15:43:07 +1200 (Fri, 29 May 2009) | 1 line
3276Changed paths:
3277   M /trunk/weka/src/main/java/weka/classifiers/lazy/IB1.java
3278   M /trunk/weka/src/main/java/weka/classifiers/lazy/IBk.java
3279   M /trunk/weka/src/main/java/weka/classifiers/lazy/KStar.java
3280   M /trunk/weka/src/main/java/weka/classifiers/lazy/LBR.java
3281   M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java
3282
3283getCapabilities() now disables all capabilities before enabling individual ones.
3284------------------------------------------------------------------------
3285r5453 | fracpete | 2009-05-31 15:24:43 +1200 (Sun, 31 May 2009) | 2 lines
3286Changed paths:
3287   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/AbstractOutput.java
3288   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/CSV.java
3289   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/HTML.java
3290   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/PlainText.java
3291
3292added option "-decimals" to output generators, to tweak the number of digits output after the decimals
3293fixed slight bugs in CSV output (no delimiter between "error" and "prediction", trailing delimiter if no additional attributes to output)
3294------------------------------------------------------------------------
3295r5463 | mhall | 2009-05-31 18:20:09 +1200 (Sun, 31 May 2009) | 1 line
3296Changed paths:
3297   M /trunk/weka/src/main/java/weka/classifiers/functions/PLSClassifier.java
3298
3299Didn't need to disable before enabling capabilities in this classifier.
3300------------------------------------------------------------------------
3301r5466 | fracpete | 2009-06-01 15:48:51 +1200 (Mon, 01 Jun 2009) | 3 lines
3302Changed paths:
3303   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/AbstractOutput.java
3304   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/CSV.java
3305   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/HTML.java
3306   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/Null.java
3307   M /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/PlainText.java
3308   A /trunk/weka/src/main/java/weka/classifiers/evaluation/output/prediction/XML.java
3309   M /trunk/weka/src/main/java/weka/gui/explorer/ClassifierPanel.java
3310
3311added prediction output generator for outputting simple XML
3312prediction generators can now output to files as well (and in that case suppress the regular output)
3313the Explorer now suppresses the output of the prediction generators if they suppress the regular output and only output to a file
3314------------------------------------------------------------------------
3315r5474 | mhall | 2009-06-02 10:26:24 +1200 (Tue, 02 Jun 2009) | 1 line
3316Changed paths:
3317   M /trunk/weka/src/main/java/weka/gui/beans/ClassifierPerformanceEvaluator.java
3318
3319Evaluation object was getting initialized with the test set rather than the training set (screwed up relative metrics). Fixed. Now checks for empty training set and initializes with test set and useNoPriors in this case.
3320------------------------------------------------------------------------
3321r5478 | mhall | 2009-06-02 10:49:15 +1200 (Tue, 02 Jun 2009) | 1 line
3322Changed paths:
3323   M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java
3324
3325More layout tweaks
3326------------------------------------------------------------------------
3327r5480 | mhall | 2009-06-02 11:56:39 +1200 (Tue, 02 Jun 2009) | 1 line
3328Changed paths:
3329   M /trunk/weka/src/main/java/weka/classifiers/meta/EnsembleSelection.java
3330
3331getCapabilities() now disables all capabilities before enabling individual ones.
3332------------------------------------------------------------------------
3333r5481 | mhall | 2009-06-02 12:09:24 +1200 (Tue, 02 Jun 2009) | 1 line
3334Changed paths:
3335   M /trunk/weka/src/main/java/weka/classifiers/mi/CitationKNN.java
3336   M /trunk/weka/src/main/java/weka/classifiers/mi/MDD.java
3337   M /trunk/weka/src/main/java/weka/classifiers/mi/MIDD.java
3338   M /trunk/weka/src/main/java/weka/classifiers/mi/MIEMDD.java
3339   M /trunk/weka/src/main/java/weka/classifiers/mi/MILR.java
3340   M /trunk/weka/src/main/java/weka/classifiers/mi/MINND.java
3341   M /trunk/weka/src/main/java/weka/classifiers/mi/MIOptimalBall.java
3342   M /trunk/weka/src/main/java/weka/classifiers/mi/MISVM.java
3343   M /trunk/weka/src/main/java/weka/classifiers/mi/TLD.java
3344   M /trunk/weka/src/main/java/weka/classifiers/mi/TLDSimple.java
3345
3346getCapabilities() now disables all capabilities before enabling individual ones.
3347------------------------------------------------------------------------
3348r5482 | mhall | 2009-06-02 12:13:28 +1200 (Tue, 02 Jun 2009) | 1 line
3349Changed paths:
3350   M /trunk/weka/src/main/java/weka/classifiers/misc/FLR.java
3351   M /trunk/weka/src/main/java/weka/classifiers/misc/HyperPipes.java
3352   M /trunk/weka/src/main/java/weka/classifiers/misc/SerializedClassifier.java
3353   M /trunk/weka/src/main/java/weka/classifiers/misc/VFI.java
3354
3355getCapabilities() now disables all capabilities before enabling individual ones.
3356------------------------------------------------------------------------
3357r5483 | mhall | 2009-06-02 13:48:43 +1200 (Tue, 02 Jun 2009) | 1 line
3358Changed paths:
3359   M /trunk/weka/src/main/java/weka/classifiers/rules/ConjunctiveRule.java
3360   M /trunk/weka/src/main/java/weka/classifiers/rules/DecisionTable.java
3361   M /trunk/weka/src/main/java/weka/classifiers/rules/JRip.java
3362   M /trunk/weka/src/main/java/weka/classifiers/rules/NNge.java
3363   M /trunk/weka/src/main/java/weka/classifiers/rules/OneR.java
3364   M /trunk/weka/src/main/java/weka/classifiers/rules/Prism.java
3365   M /trunk/weka/src/main/java/weka/classifiers/rules/Ridor.java
3366   M /trunk/weka/src/main/java/weka/classifiers/rules/ZeroR.java
3367   M /trunk/weka/src/main/java/weka/classifiers/rules/part/MakeDecList.java
3368
3369getCapabilities() now disables all capabilities before enabling individual ones.
3370------------------------------------------------------------------------
3371r5484 | mhall | 2009-06-02 13:50:25 +1200 (Tue, 02 Jun 2009) | 1 line
3372Changed paths:
3373   M /trunk/weka/src/main/java/weka/classifiers/scripting/GroovyClassifier.java
3374   M /trunk/weka/src/main/java/weka/classifiers/scripting/JythonClassifier.java
3375
3376getCapabilities() now disables all capabilities before enabling individual ones.
3377------------------------------------------------------------------------
3378r5485 | mhall | 2009-06-02 14:52:11 +1200 (Tue, 02 Jun 2009) | 1 line
3379Changed paths:
3380   M /trunk/weka/src/main/java/weka/classifiers/trees/ADTree.java
3381   M /trunk/weka/src/main/java/weka/classifiers/trees/BFTree.java
3382   M /trunk/weka/src/main/java/weka/classifiers/trees/DecisionStump.java
3383   M /trunk/weka/src/main/java/weka/classifiers/trees/FT.java
3384   M /trunk/weka/src/main/java/weka/classifiers/trees/Id3.java
3385   M /trunk/weka/src/main/java/weka/classifiers/trees/J48.java
3386   M /trunk/weka/src/main/java/weka/classifiers/trees/J48graft.java
3387   M /trunk/weka/src/main/java/weka/classifiers/trees/LADTree.java
3388   M /trunk/weka/src/main/java/weka/classifiers/trees/LMT.java
3389   M /trunk/weka/src/main/java/weka/classifiers/trees/REPTree.java
3390   M /trunk/weka/src/main/java/weka/classifiers/trees/RandomTree.java
3391   M /trunk/weka/src/main/java/weka/classifiers/trees/SimpleCart.java
3392   M /trunk/weka/src/main/java/weka/classifiers/trees/UserClassifier.java
3393   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/ClassifierTree.java
3394
3395getCapabilities() now disables all capabilities before enabling individual ones.
3396------------------------------------------------------------------------
3397r5486 | mhall | 2009-06-02 14:55:22 +1200 (Tue, 02 Jun 2009) | 1 line
3398Changed paths:
3399   M /trunk/weka/src/main/java/weka/classifiers/Classifier.java
3400   M /trunk/weka/src/main/java/weka/classifiers/MultipleClassifiersCombiner.java
3401   M /trunk/weka/src/main/java/weka/classifiers/SingleClassifierEnhancer.java
3402
3403getCapabilities() now returns maximally permissive capabilities. Now has a default implementation of RevisionHandler.
3404------------------------------------------------------------------------
3405r5487 | mhall | 2009-06-02 15:08:27 +1200 (Tue, 02 Jun 2009) | 1 line
3406Changed paths:
3407   M /trunk/weka/src/main/java/weka/clusterers/AbstractClusterer.java
3408
3409getCapabilities() now returns maximally permissive capabilities. Now has a default implementation of RevisionHandler.
3410------------------------------------------------------------------------
3411r5488 | mhall | 2009-06-02 15:09:22 +1200 (Tue, 02 Jun 2009) | 1 line
3412Changed paths:
3413   M /trunk/weka/src/main/java/weka/clusterers/CLOPE.java
3414   M /trunk/weka/src/main/java/weka/clusterers/Cobweb.java
3415   M /trunk/weka/src/main/java/weka/clusterers/DBScan.java
3416   M /trunk/weka/src/main/java/weka/clusterers/FarthestFirst.java
3417   M /trunk/weka/src/main/java/weka/clusterers/FilteredClusterer.java
3418   M /trunk/weka/src/main/java/weka/clusterers/MakeDensityBasedClusterer.java
3419   M /trunk/weka/src/main/java/weka/clusterers/OPTICS.java
3420   M /trunk/weka/src/main/java/weka/clusterers/SimpleKMeans.java
3421   M /trunk/weka/src/main/java/weka/clusterers/XMeans.java
3422   M /trunk/weka/src/main/java/weka/clusterers/sIB.java
3423
3424getCapabilities() now disables all capabilities before enabling individual ones.
3425------------------------------------------------------------------------
3426r5489 | mhall | 2009-06-02 15:22:36 +1200 (Tue, 02 Jun 2009) | 1 line
3427Changed paths:
3428   M /trunk/weka/src/main/java/weka/estimators/Estimator.java
3429
3430getCapabilities() now returns maximally permissive capabilities. Now has a default implementation of RevisionHandler.
3431------------------------------------------------------------------------
3432r5490 | mhall | 2009-06-02 15:23:10 +1200 (Tue, 02 Jun 2009) | 1 line
3433Changed paths:
3434   M /trunk/weka/src/main/java/weka/estimators/DiscreteEstimator.java
3435   M /trunk/weka/src/main/java/weka/estimators/KernelEstimator.java
3436   M /trunk/weka/src/main/java/weka/estimators/MahalanobisEstimator.java
3437   M /trunk/weka/src/main/java/weka/estimators/NormalEstimator.java
3438   M /trunk/weka/src/main/java/weka/estimators/PoissonEstimator.java
3439
3440getCapabilities() now disables all capabilities before enabling individual ones.
3441------------------------------------------------------------------------
3442r5491 | mhall | 2009-06-02 15:48:42 +1200 (Tue, 02 Jun 2009) | 1 line
3443Changed paths:
3444   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/AddClassification.java
3445   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/AttributeSelection.java
3446   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/ClassOrder.java
3447   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/Discretize.java
3448   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/NominalToBinary.java
3449   M /trunk/weka/src/main/java/weka/filters/supervised/attribute/PLSFilter.java
3450
3451getCapabilities() now disables all capabilities before enabling individual ones.
3452------------------------------------------------------------------------
3453r5492 | mhall | 2009-06-02 15:50:44 +1200 (Tue, 02 Jun 2009) | 1 line
3454Changed paths:
3455   M /trunk/weka/src/main/java/weka/filters/supervised/instance/Resample.java
3456   M /trunk/weka/src/main/java/weka/filters/supervised/instance/SMOTE.java
3457   M /trunk/weka/src/main/java/weka/filters/supervised/instance/SpreadSubsample.java
3458   M /trunk/weka/src/main/java/weka/filters/supervised/instance/StratifiedRemoveFolds.java
3459
3460getCapabilities() now disables all capabilities before enabling individual ones.
3461------------------------------------------------------------------------
3462r5498 | mhall | 2009-06-03 09:29:48 +1200 (Wed, 03 Jun 2009) | 1 line
3463Changed paths:
3464   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Add.java
3465   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddExpression.java
3466   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddID.java
3467   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddNoise.java
3468   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/AddValues.java
3469   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Center.java
3470   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/ChangeDateFormat.java
3471   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/ClassAssigner.java
3472   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Copy.java
3473   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Discretize.java
3474   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/EMImputation.java
3475   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/FirstOrder.java
3476   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/InterquartileRange.java
3477   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/KernelFilter.java
3478   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MakeIndicator.java
3479   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MathExpression.java
3480   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MergeTwoValues.java
3481   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/MultiInstanceToPropositional.java
3482   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NominalToBinary.java
3483   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NominalToString.java
3484   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Normalize.java
3485   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericCleaner.java
3486   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericToBinary.java
3487   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericToNominal.java
3488   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/NumericTransform.java
3489   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Obfuscate.java
3490   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/PartitionedMultiFilter.java
3491   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/PrincipalComponents.java
3492   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/PropositionalToMultiInstance.java
3493   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RELAGGS.java
3494   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RandomProjection.java
3495   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RandomSubset.java
3496   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Remove.java
3497   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/RemoveType.java
3498   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Reorder.java
3499   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/ReplaceMissingValues.java
3500   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/SortLabels.java
3501   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Standardize.java
3502   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToNominal.java
3503   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/StringToWordVector.java
3504   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/SwapValues.java
3505   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/TimeSeriesDelta.java
3506   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/TimeSeriesTranslate.java
3507   M /trunk/weka/src/main/java/weka/filters/unsupervised/attribute/Wavelet.java
3508
3509getCapabilities() now disables all capabilities before enabling individual ones.
3510------------------------------------------------------------------------
3511r5499 | mhall | 2009-06-03 09:36:15 +1200 (Wed, 03 Jun 2009) | 1 line
3512Changed paths:
3513   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/NonSparseToSparse.java
3514   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/Normalize.java
3515   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/Randomize.java
3516   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveFolds.java
3517   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveFrequentValues.java
3518   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveMisclassified.java
3519   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemovePercentage.java
3520   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveRange.java
3521   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/RemoveWithValues.java
3522   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/Resample.java
3523   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/ReservoirSample.java
3524   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/SparseToNonSparse.java
3525   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/SubsetByExpression.java
3526
3527getCapabilities() now disables all capabilities before enabling individual ones.
3528------------------------------------------------------------------------
3529r5500 | mhall | 2009-06-03 09:37:39 +1200 (Wed, 03 Jun 2009) | 1 line
3530Changed paths:
3531   M /trunk/weka/src/main/java/weka/filters/Filter.java
3532
3533Now has maximally permissive capabilities as default and default implementation of RevisionHandler.
3534------------------------------------------------------------------------
3535r5501 | mhall | 2009-06-03 09:37:47 +1200 (Wed, 03 Jun 2009) | 1 line
3536Changed paths:
3537   M /trunk/weka/src/main/java/weka/filters/AllFilter.java
3538   M /trunk/weka/src/main/java/weka/filters/MultiFilter.java
3539
3540getCapabilities() now disables all capabilities before enabling individual ones.
3541------------------------------------------------------------------------
3542r5505 | mhall | 2009-06-03 10:06:26 +1200 (Wed, 03 Jun 2009) | 1 line
3543Changed paths:
3544   M /trunk/weka/src/main/java/weka/associations/AbstractAssociator.java
3545
3546Doc update.
3547------------------------------------------------------------------------
3548r5506 | mhall | 2009-06-03 11:00:04 +1200 (Wed, 03 Jun 2009) | 1 line
3549Changed paths:
3550   M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java
3551
3552Now checks capabilities when data changes.
3553------------------------------------------------------------------------
3554r5508 | mhall | 2009-06-03 11:31:53 +1200 (Wed, 03 Jun 2009) | 1 line
3555Changed paths:
3556   M /trunk/weka/src/main/java/weka/gui/explorer/PreprocessPanel.java
3557
3558Fixed a class cast exception.
3559------------------------------------------------------------------------
3560r5512 | mhall | 2009-06-03 11:42:13 +1200 (Wed, 03 Jun 2009) | 1 line
3561Changed paths:
3562   M /trunk/weka/src/main/java/weka/classifiers/Classifier.java
3563
3564Doc update.
3565------------------------------------------------------------------------
3566r5514 | mhall | 2009-06-03 12:20:56 +1200 (Wed, 03 Jun 2009) | 1 line
3567Changed paths:
3568   M /trunk/weka/src/main/java/weka/gui/beans/ClassAssigner.java
3569
3570Now passes on stop notifications to upstream beans.
3571------------------------------------------------------------------------
3572r5520 | mhall | 2009-06-03 14:49:34 +1200 (Wed, 03 Jun 2009) | 1 line
3573Changed paths:
3574   M /trunk/weka/src/main/java/weka/classifiers/functions/MultilayerPerceptron.java
3575
3576Now implements Randomizable.
3577------------------------------------------------------------------------
3578r5524 | mhall | 2009-06-03 15:05:37 +1200 (Wed, 03 Jun 2009) | 1 line
3579Changed paths:
3580   M /trunk/weka/src/main/java/weka/classifiers/lazy/LWL.java
3581
3582No need to disable any capabilities here as that gets done in SingeClassifierEnhancer.
3583------------------------------------------------------------------------
3584r5530 | mhall | 2009-06-03 15:38:43 +1200 (Wed, 03 Jun 2009) | 1 line
3585Changed paths:
3586   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/ClassifierTree.java
3587
3588Now enables all capabilities by default
3589------------------------------------------------------------------------
3590r5532 | mhall | 2009-06-03 15:41:31 +1200 (Wed, 03 Jun 2009) | 1 line
3591Changed paths:
3592   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java
3593
3594Now disables all capabilities before enabling individual ones.
3595------------------------------------------------------------------------
3596r5533 | mhall | 2009-06-03 15:44:05 +1200 (Wed, 03 Jun 2009) | 1 line
3597Changed paths:
3598   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/PruneableClassifierTree.java
3599
3600Now disables all capabilities before enabling individual ones.
3601------------------------------------------------------------------------
3602r5534 | mhall | 2009-06-03 15:45:13 +1200 (Wed, 03 Jun 2009) | 1 line
3603Changed paths:
3604   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/NBTreeClassifierTree.java
3605
3606Now disables all capabilities before enabling individual ones.
3607------------------------------------------------------------------------
3608r5544 | mhall | 2009-06-04 09:43:32 +1200 (Thu, 04 Jun 2009) | 1 line
3609Changed paths:
3610   M /trunk/weka/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTree.java
3611
3612Now disables all capabilities before enabling individual ones.
3613------------------------------------------------------------------------
3614r5554 | mhall | 2009-06-04 12:56:28 +1200 (Thu, 04 Jun 2009) | 1 line
3615Changed paths:
3616   M /trunk/weka/src/main/java/weka/core/Copyright.props
3617
3618Updated for version 3.7.0
3619------------------------------------------------------------------------
3620r5558 | mhall | 2009-06-04 14:12:49 +1200 (Thu, 04 Jun 2009) | 1 line
3621Changed paths:
3622   M /trunk/weka/src/main/java/weka/core/version.txt
3623
3624Updated to 3-7-0
3625------------------------------------------------------------------------
3626r5563 | mhall | 2009-06-04 15:13:54 +1200 (Thu, 04 Jun 2009) | 1 line
3627Changed paths:
3628   M /trunk/weka/src/main/java/weka/associations/HotSpot.java
3629   D /trunk/weka/src/main/java/weka/associations/vote.arff
3630   D /trunk/weka/src/main/java/weka/associations/votes.arff
3631   M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveASEvaluation.java
3632   M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveAttributeEval.java
3633   M /trunk/weka/src/main/java/weka/attributeSelection/CostSensitiveSubsetEval.java
3634   M /trunk/weka/src/main/java/weka/attributeSelection/FilteredAttributeEval.java
3635   M /trunk/weka/src/main/java/weka/attributeSelection/FilteredSubsetEval.java
3636   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/GeneralRegression.java
3637   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/NeuralNetwork.java
3638   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/PMMLClassifier.java
3639   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/Regression.java
3640   M /trunk/weka/src/main/java/weka/classifiers/pmml/consumer/TreeModel.java
3641   M /trunk/weka/src/main/java/weka/core/ClassloaderUtil.java
3642   M /trunk/weka/src/main/java/weka/core/EnvironmentHandler.java
3643   M /trunk/weka/src/main/java/weka/core/pmml/Apply.java
3644   M /trunk/weka/src/main/java/weka/core/pmml/Array.java
3645   M /trunk/weka/src/main/java/weka/core/pmml/BuiltInArithmetic.java
3646   M /trunk/weka/src/main/java/weka/core/pmml/BuiltInMath.java
3647   M /trunk/weka/src/main/java/weka/core/pmml/Constant.java
3648   M /trunk/weka/src/main/java/weka/core/pmml/DefineFunction.java
3649   M /trunk/weka/src/main/java/weka/core/pmml/DerivedFieldMetaInfo.java
3650   M /trunk/weka/src/main/java/weka/core/pmml/Discretize.java
3651   M /trunk/weka/src/main/java/weka/core/pmml/Expression.java
3652   M /trunk/weka/src/main/java/weka/core/pmml/FieldMetaInfo.java
3653   M /trunk/weka/src/main/java/weka/core/pmml/Function.java
3654   M /trunk/weka/src/main/java/weka/core/pmml/MappingInfo.java
3655   M /trunk/weka/src/main/java/weka/core/pmml/MiningFieldMetaInfo.java
3656   M /trunk/weka/src/main/java/weka/core/pmml/MiningSchema.java
3657   M /trunk/weka/src/main/java/weka/core/pmml/NormContinuous.java
3658   M /trunk/weka/src/main/java/weka/core/pmml/NormDiscrete.java
3659   M /trunk/weka/src/main/java/weka/core/pmml/PMMLFactory.java
3660   M /trunk/weka/src/main/java/weka/core/pmml/PMMLModel.java
3661   M /trunk/weka/src/main/java/weka/core/pmml/PMMLUtils.java
3662   M /trunk/weka/src/main/java/weka/core/pmml/TargetMetaInfo.java
3663   M /trunk/weka/src/main/java/weka/core/pmml/TransformationDictionary.java
3664   M /trunk/weka/src/main/java/weka/core/xml/XStream.java
3665   M /trunk/weka/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java
3666   M /trunk/weka/src/main/java/weka/filters/unsupervised/instance/ReservoirSample.java
3667   M /trunk/weka/src/main/java/weka/gui/beans/ConfigurationEvent.java
3668   M /trunk/weka/src/main/java/weka/gui/beans/ConfigurationListener.java
3669   M /trunk/weka/src/main/java/weka/gui/beans/ConfigurationProducer.java
3670   M /trunk/weka/src/main/java/weka/gui/beans/EnvironmentField.java
3671   M /trunk/weka/src/main/java/weka/gui/beans/FlowRunner.java
3672   M /trunk/weka/src/main/java/weka/gui/beans/IncrementalClassifierEvaluatorCustomizer.java
3673   M /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMaker.java
3674   M /trunk/weka/src/main/java/weka/gui/beans/InstanceStreamToBatchMakerBeanInfo.java
3675   M /trunk/weka/src/main/java/weka/gui/beans/LogPanel.java
3676   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaver.java
3677   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverBeanInfo.java
3678   M /trunk/weka/src/main/java/weka/gui/beans/SerializedModelSaverCustomizer.java
3679   M /trunk/weka/src/main/java/weka/gui/beans/Startable.java
3680   M /trunk/weka/src/test/java/weka/associations/HotSpotTest.java
3681   M /trunk/weka/src/test/java/weka/attributeSelection/CostSensitiveAttributeEvalTest.java
3682   M /trunk/weka/src/test/java/weka/attributeSelection/CostSensitiveSubsetEvalTest.java
3683   M /trunk/weka/src/test/java/weka/attributeSelection/FilteredAttributeEvalTest.java
3684   M /trunk/weka/src/test/java/weka/attributeSelection/FilteredSubsetEvalTest.java
3685   M /trunk/weka/src/test/java/weka/attributeSelection/ScatterSearchV1Test.java
3686   M /trunk/weka/src/test/java/weka/attributeSelection/SignificanceAttributeEvalTest.java
3687   M /trunk/weka/src/test/java/weka/attributeSelection/TabuSearchTest.java
3688   M /trunk/weka/src/test/java/weka/classifiers/bayes/DMNBtextTest.java
3689   M /trunk/weka/src/test/java/weka/classifiers/functions/LibLINEARTest.java
3690   M /trunk/weka/src/test/java/weka/classifiers/meta/RotationForestTest.java
3691   M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/AllTests.java
3692   M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/GeneralRegressionTest.java
3693   M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/NeuralNetworkTest.java
3694   M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/RegressionTest.java
3695   M /trunk/weka/src/test/java/weka/classifiers/pmml/consumer/TreeModelTest.java
3696   M /trunk/weka/src/test/java/weka/classifiers/rules/DTNBTest.java
3697   M /trunk/weka/src/test/java/weka/classifiers/trees/LADTreeTest.java
3698   M /trunk/weka/src/test/java/weka/clusterers/CLOPETest.java
3699   M /trunk/weka/src/test/java/weka/clusterers/sIBTest.java
3700   M /trunk/weka/src/test/java/weka/core/MathematicalExpressionTest.java
3701   M /trunk/weka/src/test/java/weka/filters/unsupervised/instance/ReservoirSampleTest.java
3702
3703UoW automatically gets copyright for Pentaho contributions.
3704------------------------------------------------------------------------
3705r5564 | mhall | 2009-06-04 15:23:29 +1200 (Thu, 04 Jun 2009) | 1 line
3706Changed paths:
3707   M /trunk/weka/src/main/java/weka/core/Environment.java
3708
3709UoW automatically gets copyright for Pentaho contributions
3710------------------------------------------------------------------------
3711