Lines Matching refs:data_filter
564 * @param {DataFilter} data_filter
566 * @returns {String} a string representation of data_filter
568 lfunction alignments.serialize_site_filter (data_filter, site_index) {
569 GetDataInfo (fi, ^data_filter, "PARAMETERS");
572 …DataSetFilter temp = CreateFilter (^data_filter,fi["ATOM_SIZE"],'' + site_index*fi["ATOM_SIZE"] + …
825 * @param {DataFilter} data_filter
855 lfunction alignments.Extract_site_patterns (data_filter) {
859 GetDataInfo (pattern_list, ^data_filter);
861 sequence_count = ^(data_filter + ".species");
863 GetDataInfo (filter_characters, ^data_filter, "CHARACTERS");
871 GetDataInfo (site_characters, ^data_filter, -1, _pattern_);