Lines Matching refs:bRate
57 MrBFlt ***bRate; /* bRate [0,nBSets][0,numRuns][0,count[RunID]] */ member
2907 r->bRate[i][runId][0] = t->effectiveBrLen[i][p->index] / p->length; in AddSumtPartition()
2908 if (p->length == 0.0) r->bRate[i][runId][0] = 1.0; // deal with zero brl in AddSumtPartition()
2952 …r->bRate[i][runId] = (MrBFlt *) SafeRealloc ((void *)r->bRate[i][runId], ((size_t)n+ALLOC_LEN)*siz… in AddSumtPartition()
2978 r->bRate[i][runId][n] = t->effectiveBrLen[i][p->index] / p->length; in AddSumtPartition()
2979 if (p->length == 0.0) r->bRate[i][runId][n] = 1.0; // deal with zero brl in AddSumtPartition()
3101 r->bRate = (MrBFlt ***) SafeCalloc ((size_t)(sumtParams.nBSets), sizeof(MrBFlt **)); in AllocPartCtr()
3106 r->bRate[i] = (MrBFlt **) SafeCalloc ((size_t)(sumtParams.numRuns), sizeof(MrBFlt *)); in AllocPartCtr()
3110 r->bRate[i][j] = (MrBFlt *) SafeCalloc ((size_t)ALLOC_LEN, sizeof(MrBFlt)); in AllocPartCtr()
5659 … GetSummary (x->bRate[i], sumtParams.numRuns, x->count, &theStats, sumtParams.HPD); in DoSumt()
6849 free (r->bRate[i][j]); in FreePartCtr()
6852 free (r->bRate[i]); in FreePartCtr()
6855 free (r->bRate); in FreePartCtr()
7412 MrBayesPrintf (fp, "%s", MbPrintNum (x->bRate[i][runNo][treeSample])); in PrintBrParamsToFile()
7556 GetSummary (x->bRate[i], sumtParams.numRuns, x->count, &theStats, sumtParams.HPD); in PrintFigTreeNodeInfo()