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Searched refs:bam_plp_init (Results 1 – 25 of 39) sorted by relevance

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/dports/biology/py-pysam/pysam-0.18.0/samtools/
H A Dbam_plbuf.c47 buf->iter = bam_plp_init(0, 0); in bam_plbuf_init()
H A Dbam_plbuf.c.pysam.c49 buf->iter = bam_plp_init(0, 0); in bam_plbuf_init()
H A Dcut_target.c223 plp = bam_plp_init(read_aln, &g); in main_cut_target()
H A Dcut_target.c.pysam.c225 plp = bam_plp_init(read_aln, &g); in main_cut_target()
/dports/biology/samtools/samtools-1.14/
H A Dbam_plbuf.c47 buf->iter = bam_plp_init(0, 0); in bam_plbuf_init()
H A Dcut_target.c223 plp = bam_plp_init(read_aln, &g); in main_cut_target()
/dports/biology/ugene/ugene-40.1/src/libs_3rdparty/samtools/src/samtools/
H A Dbam_pileup.c163 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data) in bam_plp_init() function
347 buf->iter = bam_plp_init(0, 0); in bam_plbuf_init()
394 iter->iter[i] = bam_plp_init(func, data[i]); in bam_mplp_init()
H A Dcut_target.c165 plp = bam_plp_init(read_aln, &g); in main_cut_target()
H A Dbam.h519 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
H A Dphase.c570 iter = bam_plp_init(readaln, &g); in main_phase()
/dports/biology/stringtie/stringtie-2.1.1/samtools-0.1.18/
H A Dbam_pileup.c163 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data) in bam_plp_init() function
347 buf->iter = bam_plp_init(0, 0); in bam_plbuf_init()
394 iter->iter[i] = bam_plp_init(func, data[i]); in bam_mplp_init()
H A Dcut_target.c165 plp = bam_plp_init(read_aln, &g); in main_cut_target()
H A Dbam.h519 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/seqan1/seqan-1.3.1/lib/samtools/
H A Dbam_pileup.c163 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data) in bam_plp_init() function
347 buf->iter = bam_plp_init(0, 0); in bam_plbuf_init()
394 iter->iter[i] = bam_plp_init(func, data[i]); in bam_mplp_init()
H A Dbam.h506 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/test/
H A Dpileup.c127 plp = bam_plp_init(readaln, input); in test_pileup()
/dports/biology/htslib/htslib-1.14/test/
H A Dpileup.c127 plp = bam_plp_init(readaln, input); in test_pileup()
H A Dpileup_mod.c199 bam_plp_t iter = bam_plp_init(readaln, &dat); in main()
/dports/biology/vt/vt-0.57721/lib/htslib/htslib/
H A Dsam.h561 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/
H A Dsam.h653 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/stacks/stacks-2.4/htslib/htslib/
H A Dsam.h561 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/
H A Dsam.h546 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/
H A Dsam.h1909 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/
H A Dsam.h1923 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);
/dports/biology/htslib/htslib-1.14/htslib/
H A Dsam.h1923 bam_plp_t bam_plp_init(bam_plp_auto_f func, void *data);

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