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Searched refs:cmp_pchar (Results 1 – 10 of 10) sorted by relevance

/dports/biology/sra-tools/sra-tools-2.11.0/tools/sra-pileup/
H A Dsra-pileup.c266 static int cmp_pchar( const char * a, const char * b ) in cmp_pchar() function
322 if ( cmp_pchar( fkt, FUNC_COUNTERS ) == 0 ) in get_pileup_options()
324 else if ( cmp_pchar( fkt, FUNC_STAT ) == 0 ) in get_pileup_options()
326 else if ( cmp_pchar( fkt, FUNC_RE_REF ) == 0 ) in get_pileup_options()
330 else if ( cmp_pchar( fkt, FUNC_DEBUG ) == 0 ) in get_pileup_options()
332 else if ( cmp_pchar( fkt, FUNC_MISMATCH ) == 0 ) in get_pileup_options()
334 else if ( cmp_pchar( fkt, FUNC_INDEX ) == 0 ) in get_pileup_options()
336 else if ( cmp_pchar( fkt, FUNC_TEST ) == 0 ) in get_pileup_options()
338 else if ( cmp_pchar( fkt, FUNC_VARCOUNT ) == 0 ) in get_pileup_options()
340 else if ( cmp_pchar( fkt, FUNC_DELETES ) == 0 ) in get_pileup_options()
[all …]
H A Dinputfiles.c131 static int cmp_pchar( const char * a, const char * b ) in cmp_pchar() function
184 if ( cmp_pchar( tabname, "REFERENCE" ) == 0 ) in contains_ref_and_alignments()
186 if ( cmp_pchar( tabname, "PRIMARY_ALIGNMENT" ) == 0 ) in contains_ref_and_alignments()
H A Dref_regions.c43 static int cmp_pchar( const char * a, const char * b ) in cmp_pchar() function
361 return cmp_pchar( (const char *)item, r->name ); in reference_vs_pchar_wrapper()
373 return cmp_pchar( a->name, b->name ); in ref_vs_ref_wrapper()
683 return cmp_pchar( a->name, b->name ); in srn_vs_srn_wrapper()
751 return cmp_pchar( name, b->name ); in pchar_vs_srn_cmp()
H A Dsam-dump-opts.h286 int cmp_pchar( const char * a, const char * b );
H A Dsam-dump-opts.c42 int cmp_pchar( const char * a, const char * b ) in cmp_pchar() function
276 return cmp_pchar( (const char *)item, r->name ); in reference_vs_pchar_wrapper()
323 return cmp_pchar( a->name, b->name ); in ref_vs_ref_wrapper()
494 if ( cmp_pchar( s, "unknown" ) != 0 ) in parse_and_add_matepair_dist()
H A Dcmdline_cmn.c229 static int cmp_pchar( const char * a, const char * b )
H A Dsam-hdr.c546 if ( cmp_pchar( s, "default" ) != 0 ) in print_spotgroups()
H A Dsam-aligned.c381 if ( cmp_pchar( table_name, "SECONDARY_ALIGNMENT" ) == 0 ) in prepare_prim_sec_table_cursor()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/align/
H A Dpl_iterator.c137 static int cmp_pchar( const char * a, const char * b ) in cmp_pchar() function
164 bool res = ( cmp_pchar( ctx->name, pr->name ) == 0 ); in find_pi_ref_callback()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/align/
H A Dpl_iterator.c137 static int cmp_pchar( const char * a, const char * b ) in cmp_pchar() function
164 bool res = ( cmp_pchar( ctx->name, pr->name ) == 0 ); in find_pi_ref_callback()