| /dports/biology/py-biopython/biopython-1.79/Tests/ |
| H A D | test_PDB_Polypeptide.py | 45 pp0_seq = pp[0].get_sequence()
46 pp1_seq = pp[1].get_sequence()
47 pp2_seq = pp[2].get_sequence()
65 s = pp[0].get_sequence()
106 pp0_seq = pp[0].get_sequence()
107 pp1_seq = pp[1].get_sequence()
108 pp2_seq = pp[2].get_sequence()
163 s = pp[0].get_sequence()
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| H A D | test_PDB_MMCIFParser.py | 77 s = pp.get_sequence()
78 f_s = f_pp.get_sequence()
102 s = pp.get_sequence()
110 s = pp.get_sequence()
118 s = pp.get_sequence()
206 s = pp.get_sequence()
219 s = pp.get_sequence()
249 s = pp.get_sequence()
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| /dports/math/py-mathics/Mathics3-2.2.0/mathics/builtin/ |
| H A D | functional.py | 73 args = list(chain([Expression("Function", body)], args.get_sequence()))
85 args = args.get_sequence()
110 args = args.get_sequence()
221 functions = functions.get_sequence()
222 args = args.get_sequence()
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| H A D | logic.py | 45 args = args.get_sequence()
94 args = args.get_sequence()
239 args = args.get_sequence()
297 args = args.get_sequence()
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| H A D | comparison.py | 199 items_sequence = items.get_sequence()
218 items = items.numerify(evaluation).get_sequence()
338 items_sequence = items.get_sequence()
359 args = args.get_sequence()
379 items_sequence = items.get_sequence()
427 items = items.numerify(evaluation).get_sequence()
913 items = items.flatten(Symbol("List")).get_sequence()
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| H A D | control.py | 94 items = expr.get_sequence()
200 rules = rules.get_sequence()
244 items = items.get_sequence()
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| /dports/devel/cutter/cutter-1.2.6/glib-compatible/ |
| H A D | gsequence.c | 99 get_sequence (GSequenceNode *node) in get_sequence() function
124 seq = get_sequence (iter); in is_end()
236 seq = get_sequence (begin); in g_sequence_foreach_range()
304 g_return_val_if_fail (get_sequence (begin) == get_sequence (end), NULL); in g_sequence_range_get_midpoint()
339 g_return_val_if_fail (get_sequence (a) == get_sequence (b), 0); in g_sequence_iter_compare()
461 seq = get_sequence (iter); in g_sequence_remove()
483 g_return_if_fail (get_sequence (begin) == get_sequence (end)); in g_sequence_remove_range()
524 src_seq = get_sequence (begin); in g_sequence_move_range()
796 seq = get_sequence (iter); in g_sequence_sort_changed_iter()
944 seq = get_sequence (iter); in g_sequence_iter_get_sequence()
[all …]
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| /dports/devel/glib20/glib-2.70.4/glib/ |
| H A D | gsequence.c | 325 seq = get_sequence (begin); in g_sequence_foreach_range()
393 g_return_val_if_fail (get_sequence (begin) == get_sequence (end), NULL); in g_sequence_range_get_midpoint()
430 seq_a = get_sequence (a); in g_sequence_iter_compare()
431 seq_b = get_sequence (b); in g_sequence_iter_compare()
524 seq = get_sequence (iter); in g_sequence_insert_before()
553 seq = get_sequence (iter); in g_sequence_remove()
581 seq_end = get_sequence (end); in g_sequence_remove_range()
775 seq = get_sequence (iter); in g_sequence_sort_changed()
958 seq = get_sequence (iter); in g_sequence_sort_changed_iter()
1190 seq = get_sequence (iter); in g_sequence_iter_get_sequence()
[all …]
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| /dports/biology/p5-transdecoder/TransDecoder-TransDecoder-v5.4.0/PerlLib/ |
| H A D | Fasta_reader.pm | 86 my $sequence = $seq_obj->get_sequence();
127 sub get_sequence { subroutine
136 my $sequence = $self->get_sequence();
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| /dports/biology/p5-transdecoder/TransDecoder-TransDecoder-v5.4.0/util/ |
| H A D | get_top_longest_fasta_entries.pl | 23 my $seq = $seq_obj->get_sequence();
37 my $seq_len = length($seq_obj->get_sequence());
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| /dports/graphics/birdfont/birdfont-2.29.5/libbirdfont/OpenFontFormat/ |
| H A D | ContextualLigature.vala | 123 return get_sequence (backtrack);
127 return get_sequence (input);
131 return get_sequence (lookahead);
135 return get_sequence (ligatures);
166 GlyphSequence get_sequence (string context) {
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| /dports/math/py-mathics/Mathics3-2.2.0/mathics/builtin/numbers/ |
| H A D | exptrig.py | 102 Integer0, Integer0, None, steps.get_sequence(), evaluation
108 Integer0, Integer0, phi0, steps.get_sequence(), evaluation
113 return AnglePath._compute(x, y, None, steps.get_sequence(), evaluation)
117 return AnglePath._compute(x, y, phi0, steps.get_sequence(), evaluation)
122 return AnglePath._compute(x, y, phi0, steps.get_sequence(), evaluation)
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| /dports/science/py-rmf/rmf-1.3.1/test/ |
| H A D | test_chain.py | 21 self.assertEqual(c.get_sequence(), '')
36 self.assertEqual(c.get_sequence(), 'CGY')
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| /dports/science/rmf/rmf-1.3.1/test/ |
| H A D | test_chain.py | 21 self.assertEqual(c.get_sequence(), '')
36 self.assertEqual(c.get_sequence(), 'CGY')
|
| /dports/java/java-subversion/subversion-1.14.1/tools/dev/benchmarks/large_dirs/ |
| H A D | create_bigdir.sh | 104 get_sequence() { function
129 sequence=`get_sequence 2 ${1}`
170 sequence=`get_sequence 2 $FILECOUNT`
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| /dports/devel/py-subversion/subversion-1.14.1/tools/dev/benchmarks/large_dirs/ |
| H A D | create_bigdir.sh | 104 get_sequence() { function
129 sequence=`get_sequence 2 ${1}`
170 sequence=`get_sequence 2 $FILECOUNT`
|
| /dports/security/subversion-gnome-keyring/subversion-1.14.1/tools/dev/benchmarks/large_dirs/ |
| H A D | create_bigdir.sh | 104 get_sequence() { function
129 sequence=`get_sequence 2 ${1}`
170 sequence=`get_sequence 2 $FILECOUNT`
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| /dports/devel/p5-subversion/subversion-1.14.1/tools/dev/benchmarks/large_dirs/ |
| H A D | create_bigdir.sh | 104 get_sequence() { function
129 sequence=`get_sequence 2 ${1}`
170 sequence=`get_sequence 2 $FILECOUNT`
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| /dports/games/abuse_sdl/abuse-0.8/src/ |
| H A D | morpher.cpp | 69 figure *f1=t1->get_sequence(morph_pose)->get_figure(0), in morph_char()
70 *f2=t2->get_sequence(morph_pose)->get_figure(0); in morph_char()
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| /dports/devel/csmith/csmith-2.3.0/src/ |
| H A D | DefaultRndNumGenerator.cpp | 91 DefaultRndNumGenerator::get_sequence(std::string &sequence) in get_sequence() function in DefaultRndNumGenerator
94 seq_->get_sequence(ss); in get_sequence()
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| H A D | random.cpp | 154 get_sequence(std::string &sequence) in get_sequence() function
157 rnd->get_sequence(sequence); in get_sequence()
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| H A D | RandomNumber.cpp | 139 RandomNumber::get_sequence(std::string &sequence) in get_sequence() function in RandomNumber
141 curr_generator_->get_sequence(sequence); in get_sequence()
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| H A D | SimpleDeltaRndNumGenerator.cpp | 120 SimpleDeltaRndNumGenerator::get_sequence(std::string &sequence) in get_sequence() function in SimpleDeltaRndNumGenerator
123 seq_->get_sequence(ss); in get_sequence()
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| /dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/ngs/ |
| H A D | NGS_Fragment.c | 187 return VT ( self, get_sequence ) ( self, ctx, offset, length ); in NGS_FragmentGetSequence()
283 assert ( vt -> get_sequence != NULL ); in NGS_FragmentInit()
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| /dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/ngs/ |
| H A D | NGS_Fragment.c | 187 return VT ( self, get_sequence ) ( self, ctx, offset, length ); in NGS_FragmentGetSequence()
283 assert ( vt -> get_sequence != NULL ); in NGS_FragmentInit()
|