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Searched refs:AJMAX (Results 1 – 17 of 17) sorted by relevance

/dports/biology/emboss/EMBOSS-6.6.0/emboss/
H A Dshowserver.c485 maxlen = AJMAX(maxlen, maxscope); in showserverHead()
486 maxlen = AJMAX(maxlen, maxtype); in showserverHead()
487 maxlen = AJMAX(maxlen, maxmethod); in showserverHead()
488 maxlen = AJMAX(maxlen, maxcount); in showserverHead()
489 maxlen = AJMAX(maxlen, maxfield); in showserverHead()
490 maxlen = AJMAX(maxlen, maxdefined); in showserverHead()
491 maxlen = AJMAX(maxlen, maxversion); in showserverHead()
492 maxlen = AJMAX(maxlen, maxcachefile); in showserverHead()
493 maxlen = AJMAX(maxlen, maxurl); in showserverHead()
H A Dpscan.c168 maxelem = AJMAX(maxelem,mm->n); in pscan_print_hits()
248 maxelem = AJMAX(maxelem,mm->n); in pscan_print_hits()
329 maxhpm = AJMAX(maxelem,mm->hpm); in pscan_print_hits()
411 maxhpm = AJMAX(maxelem,mm->hpm); in pscan_print_hits()
H A Dshowdb.c887 maxlen = AJMAX(maxlen, maxtype); in showdbDBHead()
888 maxlen = AJMAX(maxlen, maxmethod); in showdbDBHead()
889 maxlen = AJMAX(maxlen, imaxfield); in showdbDBHead()
890 maxlen = AJMAX(maxlen, imaxalias); in showdbDBHead()
891 maxlen = AJMAX(maxlen, imaxexample); in showdbDBHead()
892 maxlen = AJMAX(maxlen, maxtax); in showdbDBHead()
893 maxlen = AJMAX(maxlen, maxdefined); in showdbDBHead()
894 maxlen = AJMAX(maxlen, maxrelease); in showdbDBHead()
H A Dprophecy.c202 score = AJMAX(score,matrix[j][i]); in prophecy_simple_matrix()
322 gsum = AJMAX(gsum,(end-start)+1); in prophecy_gribskov_profile()
553 gsum = AJMAX(gsum,(end-start)+1); in prophecy_henikoff_profile()
H A Drecoder.c503 max = AJMAX(rlp->cut3,rlp->cut4); in recoder_checkPat()
508 max = AJMAX(rlp->cut1,rlp->cut2); in recoder_checkPat()
H A Dsilent.c532 max = AJMAX(rlp->cut3,rlp->cut4); in silent_checktrans()
537 max = AJMAX(rlp->cut1,rlp->cut2); in silent_checktrans()
H A Dpepwindow.c117 totalmax = AJMAX(total, totalmax); in main()
H A Dpepwindowall.c149 totalmax = AJMAX(total, totalmax); in main()
H A Dprima.c620 mm = AJMAX(mm, n); in prima_primalign()
/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/
H A Dajmath.h73 #define AJMAX(a,b) ((a > b) ? a : b) macro
H A Dajreport.c561 jstart = AJMAX(6, istart); in reportWriteDbMotif()
1723 tagsizes[j] = AJMAX(tagsizes[j], ajStrGetLen(tagval)); in reportWriteNameTable()
2006 tagsizes[j] = AJMAX(tagsizes[j], ajStrGetLen(tagval)); in reportWriteSeqTable()
2422 tagsizes[j] = AJMAX(tagsizes[j], ajStrGetLen(tagval)); in reportWriteTable()
2615 margin = AJMAX(margin, ajStrGetLen(featname)); in reportWriteTagseq()
2634 margin = AJMAX(margin, in reportWriteTagseq()
2637 margin = AJMAX(margin, in reportWriteTagseq()
3282 (*sizes)[i] = AJMAX(jmin, ajStrGetLen((*prints)[i])); in reportGetTags()
H A Dajfeat.c955 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewProtFlags()
956 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewProtFlags()
1044 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewProtFlagsSub()
1045 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewProtFlagsSub()
1427 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewNucFlags()
1428 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewNucFlags()
1546 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewNucFlagsSub()
1547 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewNucFlagsSub()
1857 thys->Len = AJMAX(thys->Len, feature->Start); in ajFeattableAdd()
1858 thys->Len = AJMAX(thys->Len, feature->End); in ajFeattableAdd()
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H A Dajstr.c3375 j = AJMAX(thys->Res, thys->Len+2); in ajStrAppendK()
3419 j = AJMAX(thys->Res, thys->Len+str->Len+1); in ajStrAppendS()
3467 j = AJMAX(thys->Res, (thys->Len+snum+1)); in ajStrAppendCountK()
3518 j = AJMAX(thys->Res, (thys->Len+len+1)); in ajStrAppendLenC()
3572 j = AJMAX(thys->Res, thys->Len+ilen+1); in ajStrAppendSubC()
3626 j = AJMAX(thys->Res, thys->Len+ilen+1); in ajStrAppendSubS()
9060 l = AJMAX(INT_MIN, l); in ajStrToHex()
9109 l = AJMAX(INT_MIN, l); in ajStrToInt()
/dports/biology/emboss/EMBOSS-6.6.0/nucleus/
H A Dembpat.c1634 maxcut=AJMAX(enz->cut1,enz->cut2); in embPatRestrictScan()
1638 maxcut=AJMAX(maxcut,enz->cut3); in embPatRestrictScan()
1639 maxcut=AJMAX(maxcut,enz->cut4); in embPatRestrictScan()
3212 x = AJMAX(j+1,jj); in embPatTUInit()
3355 skipm[j][i] = AJMAX(m-k-1,1); in embPatTUBInit()
3373 x = AJMAX(j+1,jj); in embPatTUBInit()
H A Dembaln.c2925 maxlen = AJMAX(ajStrGetLen(m), ajStrGetLen(n)); in embAlignReportGlobal()
3022 maxlen = AJMAX(ajSeqGetLen(seqa), ajSeqGetLen(seqb)); in embAlignReportGlobal()
/dports/math/R-cran-lpSolve/lpSolve/src/
H A Dlusol1.h40 REAL AIJMAX, AJMAX; local
66 AJMAX = fabs(DA[DAPOS(L,J)]);
67 if(AJMAX<=SMALL) {
116 if(AIJMAX<AJMAX) {
117 AIJMAX = AJMAX;
/dports/math/lp_solve/lp_solve_5.5/bfp/bfp_LUSOL/LUSOL/
H A Dlusol1.c40 REAL AIJMAX, AJMAX; local
66 AJMAX = fabs(DA[DAPOS(L,J)]);
67 if(AJMAX<=SMALL) {
116 if(AIJMAX<AJMAX) {
117 AIJMAX = AJMAX;