/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | showserver.c | 485 maxlen = AJMAX(maxlen, maxscope); in showserverHead() 486 maxlen = AJMAX(maxlen, maxtype); in showserverHead() 487 maxlen = AJMAX(maxlen, maxmethod); in showserverHead() 488 maxlen = AJMAX(maxlen, maxcount); in showserverHead() 489 maxlen = AJMAX(maxlen, maxfield); in showserverHead() 490 maxlen = AJMAX(maxlen, maxdefined); in showserverHead() 491 maxlen = AJMAX(maxlen, maxversion); in showserverHead() 492 maxlen = AJMAX(maxlen, maxcachefile); in showserverHead() 493 maxlen = AJMAX(maxlen, maxurl); in showserverHead()
|
H A D | pscan.c | 168 maxelem = AJMAX(maxelem,mm->n); in pscan_print_hits() 248 maxelem = AJMAX(maxelem,mm->n); in pscan_print_hits() 329 maxhpm = AJMAX(maxelem,mm->hpm); in pscan_print_hits() 411 maxhpm = AJMAX(maxelem,mm->hpm); in pscan_print_hits()
|
H A D | showdb.c | 887 maxlen = AJMAX(maxlen, maxtype); in showdbDBHead() 888 maxlen = AJMAX(maxlen, maxmethod); in showdbDBHead() 889 maxlen = AJMAX(maxlen, imaxfield); in showdbDBHead() 890 maxlen = AJMAX(maxlen, imaxalias); in showdbDBHead() 891 maxlen = AJMAX(maxlen, imaxexample); in showdbDBHead() 892 maxlen = AJMAX(maxlen, maxtax); in showdbDBHead() 893 maxlen = AJMAX(maxlen, maxdefined); in showdbDBHead() 894 maxlen = AJMAX(maxlen, maxrelease); in showdbDBHead()
|
H A D | prophecy.c | 202 score = AJMAX(score,matrix[j][i]); in prophecy_simple_matrix() 322 gsum = AJMAX(gsum,(end-start)+1); in prophecy_gribskov_profile() 553 gsum = AJMAX(gsum,(end-start)+1); in prophecy_henikoff_profile()
|
H A D | recoder.c | 503 max = AJMAX(rlp->cut3,rlp->cut4); in recoder_checkPat() 508 max = AJMAX(rlp->cut1,rlp->cut2); in recoder_checkPat()
|
H A D | silent.c | 532 max = AJMAX(rlp->cut3,rlp->cut4); in silent_checktrans() 537 max = AJMAX(rlp->cut1,rlp->cut2); in silent_checktrans()
|
H A D | pepwindow.c | 117 totalmax = AJMAX(total, totalmax); in main()
|
H A D | pepwindowall.c | 149 totalmax = AJMAX(total, totalmax); in main()
|
H A D | prima.c | 620 mm = AJMAX(mm, n); in prima_primalign()
|
/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
H A D | ajmath.h | 73 #define AJMAX(a,b) ((a > b) ? a : b) macro
|
H A D | ajreport.c | 561 jstart = AJMAX(6, istart); in reportWriteDbMotif() 1723 tagsizes[j] = AJMAX(tagsizes[j], ajStrGetLen(tagval)); in reportWriteNameTable() 2006 tagsizes[j] = AJMAX(tagsizes[j], ajStrGetLen(tagval)); in reportWriteSeqTable() 2422 tagsizes[j] = AJMAX(tagsizes[j], ajStrGetLen(tagval)); in reportWriteTable() 2615 margin = AJMAX(margin, ajStrGetLen(featname)); in reportWriteTagseq() 2634 margin = AJMAX(margin, in reportWriteTagseq() 2637 margin = AJMAX(margin, in reportWriteTagseq() 3282 (*sizes)[i] = AJMAX(jmin, ajStrGetLen((*prints)[i])); in reportGetTags()
|
H A D | ajfeat.c | 955 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewProtFlags() 956 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewProtFlags() 1044 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewProtFlagsSub() 1045 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewProtFlagsSub() 1427 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewNucFlags() 1428 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewNucFlags() 1546 thys->Len = AJMAX(thys->Len, ret->Start); in ajFeatNewNucFlagsSub() 1547 thys->Len = AJMAX(thys->Len, ret->End); in ajFeatNewNucFlagsSub() 1857 thys->Len = AJMAX(thys->Len, feature->Start); in ajFeattableAdd() 1858 thys->Len = AJMAX(thys->Len, feature->End); in ajFeattableAdd() [all …]
|
H A D | ajstr.c | 3375 j = AJMAX(thys->Res, thys->Len+2); in ajStrAppendK() 3419 j = AJMAX(thys->Res, thys->Len+str->Len+1); in ajStrAppendS() 3467 j = AJMAX(thys->Res, (thys->Len+snum+1)); in ajStrAppendCountK() 3518 j = AJMAX(thys->Res, (thys->Len+len+1)); in ajStrAppendLenC() 3572 j = AJMAX(thys->Res, thys->Len+ilen+1); in ajStrAppendSubC() 3626 j = AJMAX(thys->Res, thys->Len+ilen+1); in ajStrAppendSubS() 9060 l = AJMAX(INT_MIN, l); in ajStrToHex() 9109 l = AJMAX(INT_MIN, l); in ajStrToInt()
|
/dports/biology/emboss/EMBOSS-6.6.0/nucleus/ |
H A D | embpat.c | 1634 maxcut=AJMAX(enz->cut1,enz->cut2); in embPatRestrictScan() 1638 maxcut=AJMAX(maxcut,enz->cut3); in embPatRestrictScan() 1639 maxcut=AJMAX(maxcut,enz->cut4); in embPatRestrictScan() 3212 x = AJMAX(j+1,jj); in embPatTUInit() 3355 skipm[j][i] = AJMAX(m-k-1,1); in embPatTUBInit() 3373 x = AJMAX(j+1,jj); in embPatTUBInit()
|
H A D | embaln.c | 2925 maxlen = AJMAX(ajStrGetLen(m), ajStrGetLen(n)); in embAlignReportGlobal() 3022 maxlen = AJMAX(ajSeqGetLen(seqa), ajSeqGetLen(seqb)); in embAlignReportGlobal()
|
/dports/math/R-cran-lpSolve/lpSolve/src/ |
H A D | lusol1.h | 40 REAL AIJMAX, AJMAX; local 66 AJMAX = fabs(DA[DAPOS(L,J)]); 67 if(AJMAX<=SMALL) { 116 if(AIJMAX<AJMAX) { 117 AIJMAX = AJMAX;
|
/dports/math/lp_solve/lp_solve_5.5/bfp/bfp_LUSOL/LUSOL/ |
H A D | lusol1.c | 40 REAL AIJMAX, AJMAX; local 66 AJMAX = fabs(DA[DAPOS(L,J)]); 67 if(AJMAX<=SMALL) { 116 if(AIJMAX<AJMAX) { 117 AIJMAX = AJMAX;
|