Home
last modified time | relevance | path

Searched refs:Evalue (Results 1 – 25 of 128) sorted by relevance

123456

/dports/biology/py-biopython/biopython-1.79/Tests/Hmmer/
H A Dtext_31b2_hmmscan_001.out132 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
144 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
161 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
178 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
197 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
216 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
235 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
254 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
273 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
297 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dtext_31b2_hmmsearch_002.out36 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
48 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
67 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
79 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
91 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
110 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
136 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
169 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
188 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
207 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dtext_30_hmmsearch_003.out33 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
39 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
45 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
51 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
57 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
63 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
69 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dtext_31b2_hmmsearch_001.out36 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
48 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
67 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
79 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
91 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
110 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
136 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
169 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
188 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
207 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dtext_31b2_phmmer_001.out35 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
57 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
74 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
103 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
120 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
139 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
158 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
175 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
187 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
199 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dtext_30_hmmscan_007.out30 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
35 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
40 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
46 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
51 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dtext_31b1_hmmscan_001.out53 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
98 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
110 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
155 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
188 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
209 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
258 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
270 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
283 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
302 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dtext_30_hmmscan_001.out51 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
96 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
108 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
151 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
184 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
235 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
247 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
260 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
279 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
291 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dtext_30_hmmscan_006.out29 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
41 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
54 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
73 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
85 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dtext_30_hmmscan_009.out27 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
52 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
71 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
84 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
117 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dtext_30_hmmscan_010.out35 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
136 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
192 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
263 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
319 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
390 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
461 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
510 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
582 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
608 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dtext_30_hmmscan_004.out25 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
37 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
/dports/biology/hmmer/hmmer-3.3/easel/demotic/examples/
H A Dexample.phmmer.out39 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
61 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
80 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
99 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
118 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
137 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
156 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
168 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
187 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
206 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dexample.hmmsearch.out36 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
60 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
77 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
94 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
111 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
128 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
145 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
162 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
174 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
186 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
/dports/biology/infernal/infernal-1.1.3/easel/demotic/examples/
H A Dexample.phmmer.out39 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
61 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
80 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
99 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
118 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
137 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
156 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
168 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
187 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
206 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
H A Dexample.hmmsearch.out36 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
60 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
77 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
94 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
111 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
128 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
145 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
162 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
174 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
186 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
[all …]
/dports/science/chrono/chrono-7.0.1/src/chrono_thirdparty/HACDv2/
H A DdgPlane.h35 hacd::HaF32 Evalue (const hacd::HaF32 *point) const;
36 hacd::HaF32 Evalue (const dgVector &point) const;
47 hacd::HaF64 Evalue (const hacd::HaF32 *point) const;
49 hacd::HaF64 Evalue (const hacd::HaF64 *point) const;
51 hacd::HaF64 Evalue (const dgVector &point) const;
52 hacd::HaF64 Evalue (const dgBigVector &point) const;
86 HACD_INLINE hacd::HaF32 dgPlane::Evalue (const hacd::HaF32 *point) const in Evalue() function
91 HACD_INLINE hacd::HaF32 dgPlane::Evalue (const dgVector &point) const in Evalue() function
126 HACD_INLINE hacd::HaF64 dgBigPlane::Evalue (const hacd::HaF32 *point) const in Evalue() function
132 HACD_INLINE hacd::HaF64 dgBigPlane::Evalue (const hacd::HaF64 *point) const in Evalue() function
[all …]
/dports/biology/mothur/mothur-1.46.1/source/uchime_src/
H A Devalue.h19 double ComputeMinScoreGivenEvalueAGapped(double Evalue, unsigned Area);
20 double ComputeMinScoreGivenEvalueAUngapped(double Evalue, unsigned Area);
21 double ComputeMinScoreGivenEvalueQGapped(double Evalue, unsigned QueryLength);
22 double ComputeMinScoreGivenEvalueQUngapped(double Evalue, unsigned QueryLength);
/dports/biology/py-biopython/biopython-1.79/Tests/Compass/
H A Dcomtest25 Smith-Waterman score = 35 Evalue = 1.01e+03
15 Smith-Waterman score = 35 Evalue = 1.01e+03
25 Smith-Waterman score = 37 Evalue = 5.75e+02
35 Smith-Waterman score = 37 Evalue = 5.75e+02
/dports/biology/hhsuite/hh-suite-3.3.0/scripts/
H A Dpdbfilter.pl85 my $Evalue; # BLAST E-value
192 $Evalue=$1;
193 $Evalue=~s/^e/1e/;
194 $Evalue=~s/,$//;
203 if ($id>=$idmax && $Evalue<=$Evalmin && $cov>=$covmin && $resol<=$resol{$pdbid}) {
/dports/biology/hmmer/hmmer-3.3/documentation/userguide/inclusions/
H A Dhmmsearch-fn3-sevenless.out32 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dhmmsearch-fn3-uniprot.out2 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dhmmscan-minifam-sevenless.out23 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
/dports/biology/infernal/infernal-1.1.3/hmmer/documentation/userguide/inclusions/
H A Dhmmsearch-fn3-sevenless.out32 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
H A Dhmmsearch-fn3-uniprot.out2 … # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc

123456