| .. | | 02-Mar-2020 | - |
| cache/ | H | 05-Mar-2021 | - | 443 | 261 |
| gff/ | H | 02-Mar-2020 | - | 2,165 | 1,040 |
| packed/ | H | 05-Mar-2021 | - | 800 | 447 |
| vamsas/ | H | 05-Mar-2021 | - | 3,280 | 2,235 |
| vcf/ | H | 05-Mar-2021 | - | 1,661 | 912 |
| AMSAFile.java | H A D | 09-May-2018 | 2.9 KiB | 122 | 76 |
| AlignFile.java | H A D | 05-Mar-2021 | 9.8 KiB | 436 | 218 |
| AlignmentFileReaderI.java | H A D | 05-Mar-2021 | 1.4 KiB | 51 | 18 |
| AlignmentFileWriterI.java | H A D | 05-Mar-2021 | 1.4 KiB | 45 | 15 |
| AlignmentProperties.java | H A D | 09-May-2018 | 4 KiB | 157 | 102 |
| AnnotationFile.java | H A D | 05-Mar-2021 | 50.8 KiB | 1,800 | 1,525 |
| AppletFormatAdapter.java | H A D | 05-Mar-2021 | 17.9 KiB | 665 | 478 |
| BLCFile.java | H A D | 09-May-2018 | 6.1 KiB | 284 | 175 |
| BackupFilenameFilter.java | H A D | 14-Jan-2021 | 1.8 KiB | 67 | 36 |
| BackupFilenameParts.java | H A D | 14-Jan-2021 | 5.1 KiB | 173 | 118 |
| BackupFiles.java | H A D | 05-Mar-2021 | 30.6 KiB | 929 | 700 |
| BackupFilesPresetEntry.java | H A D | 14-Jan-2021 | 6.1 KiB | 194 | 136 |
| BioJsHTMLOutput.java | H A D | 05-Mar-2021 | 8.5 KiB | 314 | 259 |
| ClustalFile.java | H A D | 26-May-2018 | 6.5 KiB | 269 | 213 |
| DBRefFile.java | H A D | 09-May-2018 | 1.4 KiB | 52 | 15 |
| DataSourceType.java | H A D | 05-Mar-2021 | 935 | 27 | 5 |
| EmblFlatFile.java | H A D | 05-Mar-2021 | 24.6 KiB | 899 | 536 |
| FastaFile.java | H A D | 09-May-2018 | 4.9 KiB | 230 | 145 |
| FeaturesFile.java | H A D | 05-Mar-2021 | 43.2 KiB | 1,540 | 946 |
| FileFormat.java | H A D | 05-Mar-2021 | 9.5 KiB | 460 | 372 |
| FileFormatException.java | H A D | 09-May-2018 | 1 KiB | 34 | 9 |
| FileFormatI.java | H A D | 09-May-2018 | 2.4 KiB | 84 | 15 |
| FileFormats.java | H A D | 05-Mar-2021 | 4.9 KiB | 192 | 92 |
| FileLoader.java | H A D | 05-Mar-2021 | 18.1 KiB | 610 | 440 |
| FileParse.java | H A D | 05-Mar-2021 | 18.2 KiB | 731 | 461 |
| FormatAdapter.java | H A D | 05-Mar-2021 | 8 KiB | 272 | 175 |
| HTMLOutput.java | H A D | 05-Mar-2021 | 10.4 KiB | 336 | 239 |
| HtmlFile.java | H A D | 09-May-2018 | 4.9 KiB | 195 | 134 |
| HtmlSvgOutput.java | H A D | 05-Mar-2021 | 12.1 KiB | 308 | 259 |
| IdentifyFile.java | H A D | 05-Mar-2021 | 12.1 KiB | 444 | 335 |
| InputStreamParser.java | H A D | 09-May-2018 | 1.5 KiB | 51 | 25 |
| IntKeyStringValueEntry.java | H A D | 14-Jan-2021 | 1.1 KiB | 42 | 16 |
| JPredFile.java | H A D | 05-Mar-2021 | 11.5 KiB | 451 | 259 |
| JSONFile.java | H A D | 05-Mar-2021 | 28.8 KiB | 898 | 753 |
| JalviewFileChooser.java | H A D | 05-Mar-2021 | 15.4 KiB | 568 | 404 |
| JalviewFileFilter.java | H A D | 26-Apr-2019 | 4.7 KiB | 214 | 148 |
| JalviewFileView.java | H A D | 26-Apr-2019 | 4.4 KiB | 186 | 126 |
| JnetAnnotationMaker.java | H A D | 05-Mar-2021 | 8.3 KiB | 254 | 182 |
| MSFfile.java | H A D | 05-Mar-2021 | 9.3 KiB | 414 | 274 |
| ModellerDescription.java | H A D | 05-Mar-2021 | 10.1 KiB | 429 | 313 |
| NewickFile.java | H A D | 05-Mar-2021 | 26.9 KiB | 996 | 605 |
| PDBFeatureSettings.java | H A D | 05-Mar-2021 | 2.1 KiB | 87 | 53 |
| PIRFile.java | H A D | 09-May-2018 | 4.9 KiB | 203 | 143 |
| PfamFile.java | H A D | 09-May-2018 | 4.2 KiB | 192 | 139 |
| PhylipFile.java | H A D | 09-May-2018 | 9.1 KiB | 328 | 168 |
| PileUpfile.java | H A D | 09-May-2018 | 4.3 KiB | 194 | 117 |
| RnamlFile.java | H A D | 09-May-2018 | 6.6 KiB | 240 | 156 |
| ScoreMatrixFile.java | H A D | 14-Jan-2021 | 12.2 KiB | 454 | 264 |
| SequenceAnnotationReport.java | H A D | 05-Mar-2021 | 16.9 KiB | 635 | 434 |
| SimpleBlastFile.java | H A D | 09-May-2018 | 8.6 KiB | 299 | 232 |
| StockholmFile.java | H A D | 05-Mar-2021 | 39.4 KiB | 1,301 | 938 |
| StructureFile.java | H A D | 05-Mar-2021 | 12.8 KiB | 498 | 362 |
| TCoffeeScoreFile.java | H A D | 05-Mar-2021 | 17 KiB | 656 | 390 |
| VamsasAppDatastore.java | H A D | 05-Mar-2021 | 91.5 KiB | 2,831 | 2,031 |
| WSWUBlastClient.java | H A D | 05-Mar-2021 | 8 KiB | 322 | 227 |