|
Name |
|
Date |
Size |
#Lines |
LOC |
| .. | | 03-May-2022 | - |
| calculators/ | H | 01-Sep-2021 | - | 15,325 | 8,508 |
| chimera/ | H | 01-Sep-2021 | - | 7,489 | 4,975 |
| classifier/ | H | 01-Sep-2021 | - | 4,257 | 2,854 |
| clearcut/ | H | 01-Sep-2021 | - | 6,415 | 3,073 |
| commands/ | H | 01-Sep-2021 | - | 97,529 | 71,382 |
| communitytype/ | H | 01-Sep-2021 | - | 2,205 | 1,546 |
| datastructures/ | H | 01-Sep-2021 | - | 28,795 | 19,727 |
| engines/ | H | 01-Sep-2021 | - | 760 | 487 |
| metastats/ | H | 01-Sep-2021 | - | 749 | 499 |
| read/ | H | 01-Sep-2021 | - | 2,883 | 1,881 |
| svm/ | H | 01-Sep-2021 | - | 2,151 | 1,417 |
| uchime_src/ | H | 01-Sep-2021 | - | 12,803 | 11,027 |
| alignreport.cpp | H A D | 01-Sep-2021 | 6.8 KiB | 212 | 155 |
| alignreport.hpp | H A D | 01-Sep-2021 | 4.2 KiB | 92 | 56 |
| averagelinkage.cpp | H A D | 01-Sep-2021 | 1.4 KiB | 54 | 30 |
| calcsparcc.cpp | H A D | 01-Sep-2021 | 10.5 KiB | 341 | 256 |
| calcsparcc.h | H A D | 01-Sep-2021 | 1.5 KiB | 58 | 31 |
| checked.h | H A D | 01-Sep-2021 | 11.9 KiB | 328 | 258 |
| cluster.cpp | H A D | 01-Sep-2021 | 8 KiB | 214 | 164 |
| cluster.hpp | H A D | 01-Sep-2021 | 2.4 KiB | 108 | 73 |
| clusterclassic.cpp | H A D | 01-Sep-2021 | 17.4 KiB | 585 | 409 |
| clusterclassic.h | H A D | 01-Sep-2021 | 1.2 KiB | 61 | 39 |
| collect.cpp | H A D | 01-Sep-2021 | 5.2 KiB | 149 | 91 |
| collect.h | H A D | 01-Sep-2021 | 1,020 | 40 | 27 |
| collectdisplay.h | H A D | 01-Sep-2021 | 3.4 KiB | 88 | 54 |
| collectorscurvedata.h | H A D | 01-Sep-2021 | 2.7 KiB | 77 | 48 |
| commandfactory.cpp | H A D | 01-Sep-2021 | 50 KiB | 843 | 774 |
| commandfactory.hpp | H A D | 01-Sep-2021 | 1.1 KiB | 51 | 31 |
| commandoptionparser.cpp | H A D | 01-Sep-2021 | 2.5 KiB | 61 | 34 |
| commandoptionparser.hpp | H A D | 01-Sep-2021 | 573 | 24 | 15 |
| commandparameter.h | H A D | 01-Sep-2021 | 3.6 KiB | 57 | 25 |
| completelinkage.cpp | H A D | 01-Sep-2021 | 978 | 35 | 21 |
| consensus.cpp | H A D | 01-Sep-2021 | 12 KiB | 434 | 259 |
| consensus.h | H A D | 01-Sep-2021 | 2.2 KiB | 62 | 33 |
| core.h | H A D | 01-Sep-2021 | 10.5 KiB | 333 | 226 |
| currentfile.cpp | H A D | 01-Sep-2021 | 16.2 KiB | 356 | 301 |
| currentfile.h | H A D | 01-Sep-2021 | 13.3 KiB | 215 | 178 |
| display.h | H A D | 01-Sep-2021 | 943 | 35 | 24 |
| dlibshuff.cpp | H A D | 01-Sep-2021 | 2 KiB | 96 | 49 |
| dlibshuff.h | H A D | 01-Sep-2021 | 483 | 30 | 15 |
| endiannessmacros.h | H A D | 01-Sep-2021 | 4.4 KiB | 166 | 80 |
| fileoutput.cpp | H A D | 01-Sep-2021 | 6.8 KiB | 205 | 168 |
| fileoutput.h | H A D | 01-Sep-2021 | 2.8 KiB | 119 | 65 |
| gotohoverlap.cpp | H A D | 01-Sep-2021 | 3.7 KiB | 103 | 65 |
| gotohoverlap.hpp | H A D | 01-Sep-2021 | 1.4 KiB | 46 | 16 |
| heatmap.cpp | H A D | 01-Sep-2021 | 26.4 KiB | 739 | 504 |
| heatmap.h | H A D | 01-Sep-2021 | 2.2 KiB | 81 | 47 |
| heatmapsim.cpp | H A D | 01-Sep-2021 | 8.7 KiB | 236 | 140 |
| heatmapsim.h | H A D | 01-Sep-2021 | 834 | 43 | 20 |
| inputdata.cpp | H A D | 01-Sep-2021 | 29.9 KiB | 1,063 | 760 |
| inputdata.h | H A D | 01-Sep-2021 | 1.9 KiB | 61 | 54 |
| libshuff.cpp | H A D | 01-Sep-2021 | 3.5 KiB | 143 | 99 |
| libshuff.h | H A D | 01-Sep-2021 | 934 | 46 | 30 |
| linearalgebra.cpp | H A D | 01-Sep-2021 | 79.5 KiB | 2,561 | 1,981 |
| linearalgebra.h | H A D | 01-Sep-2021 | 3.7 KiB | 86 | 58 |
| mothur.cpp | H A D | 01-Sep-2021 | 5 KiB | 141 | 103 |
| mothur.h | H A D | 01-Sep-2021 | 17.1 KiB | 655 | 464 |
| mothurout.cpp | H A D | 01-Sep-2021 | 18.4 KiB | 393 | 342 |
| mothurout.h | H A D | 01-Sep-2021 | 4.2 KiB | 110 | 77 |
| myseqdist.cpp | H A D | 01-Sep-2021 | 11.4 KiB | 350 | 267 |
| myseqdist.h | H A D | 01-Sep-2021 | 808 | 45 | 22 |
| nast.cpp | H A D | 01-Sep-2021 | 15.2 KiB | 405 | 271 |
| nast.hpp | H A D | 01-Sep-2021 | 1.3 KiB | 53 | 23 |
| needlemanoverlap.cpp | H A D | 01-Sep-2021 | 8 KiB | 201 | 138 |
| needlemanoverlap.hpp | H A D | 01-Sep-2021 | 1.4 KiB | 47 | 17 |
| noalign.cpp | H A D | 01-Sep-2021 | 741 | 26 | 5 |
| noalign.hpp | H A D | 01-Sep-2021 | 549 | 31 | 11 |
| observable.h | H A D | 01-Sep-2021 | 392 | 21 | 10 |
| opticluster.cpp | H A D | 01-Sep-2021 | 12.2 KiB | 297 | 208 |
| opticluster.h | H A D | 01-Sep-2021 | 2.4 KiB | 75 | 53 |
| optifitcluster.cpp | H A D | 01-Sep-2021 | 31.4 KiB | 651 | 471 |
| optifitcluster.hpp | H A D | 01-Sep-2021 | 2.5 KiB | 82 | 57 |
| optionparser.cpp | H A D | 01-Sep-2021 | 14 KiB | 360 | 286 |
| optionparser.h | H A D | 01-Sep-2021 | 892 | 43 | 23 |
| overlap.cpp | H A D | 01-Sep-2021 | 2.8 KiB | 83 | 45 |
| overlap.hpp | H A D | 01-Sep-2021 | 1.2 KiB | 38 | 14 |
| raredisplay.cpp | H A D | 01-Sep-2021 | 2.9 KiB | 116 | 80 |
| raredisplay.h | H A D | 01-Sep-2021 | 1 KiB | 38 | 26 |
| rarefact.cpp | H A D | 01-Sep-2021 | 9.8 KiB | 283 | 183 |
| rarefact.h | H A D | 01-Sep-2021 | 1 KiB | 44 | 30 |
| rarefactioncurvedata.h | H A D | 01-Sep-2021 | 1.6 KiB | 55 | 31 |
| refchimeratest.cpp | H A D | 01-Sep-2021 | 19.8 KiB | 687 | 481 |
| refchimeratest.h | H A D | 01-Sep-2021 | 1.5 KiB | 53 | 35 |
| sensspeccalc.cpp | H A D | 01-Sep-2021 | 2.7 KiB | 76 | 49 |
| sensspeccalc.hpp | H A D | 01-Sep-2021 | 557 | 32 | 15 |
| seqnoise.cpp | H A D | 01-Sep-2021 | 25.4 KiB | 1,020 | 649 |
| seqnoise.h | H A D | 01-Sep-2021 | 2.9 KiB | 74 | 38 |
| sharedwriter.hpp | H A D | 01-Sep-2021 | 1.2 KiB | 41 | 23 |
| singlelinkage.cpp | H A D | 01-Sep-2021 | 945 | 33 | 20 |
| slibshuff.cpp | H A D | 01-Sep-2021 | 2.3 KiB | 117 | 73 |
| slibshuff.h | H A D | 01-Sep-2021 | 428 | 28 | 13 |
| subsample.cpp | H A D | 01-Sep-2021 | 38.8 KiB | 930 | 665 |
| subsample.h | H A D | 01-Sep-2021 | 4.2 KiB | 66 | 37 |
| summary.cpp | H A D | 01-Sep-2021 | 46.1 KiB | 1,032 | 806 |
| summary.hpp | H A D | 01-Sep-2021 | 8.3 KiB | 165 | 127 |
| trialSwap2.cpp | H A D | 01-Sep-2021 | 11 KiB | 344 | 268 |
| trialswap2.h | H A D | 01-Sep-2021 | 1.1 KiB | 47 | 24 |
| trimoligos.cpp | H A D | 01-Sep-2021 | 148.1 KiB | 3,382 | 2,553 |
| trimoligos.h | H A D | 01-Sep-2021 | 3.7 KiB | 98 | 61 |
| unchecked.h | H A D | 01-Sep-2021 | 8.7 KiB | 229 | 178 |
| utf8.h | H A D | 01-Sep-2021 | 1.5 KiB | 35 | 5 |
| utils.cpp | H A D | 01-Sep-2021 | 223.6 KiB | 6,791 | 5,151 |
| utils.hpp | H A D | 01-Sep-2021 | 15 KiB | 305 | 259 |
| validcalculator.cpp | H A D | 01-Sep-2021 | 35.6 KiB | 818 | 722 |
| validcalculator.h | H A D | 01-Sep-2021 | 1.5 KiB | 67 | 46 |
| validparameter.cpp | H A D | 01-Sep-2021 | 12.9 KiB | 384 | 283 |
| validparameter.h | H A D | 01-Sep-2021 | 1.1 KiB | 45 | 24 |
| venn.cpp | H A D | 01-Sep-2021 | 70 KiB | 996 | 742 |
| venn.h | H A D | 01-Sep-2021 | 752 | 39 | 19 |
| vsearchfileparser.cpp | H A D | 01-Sep-2021 | 8.5 KiB | 253 | 177 |
| vsearchfileparser.h | H A D | 01-Sep-2021 | 1.7 KiB | 54 | 31 |
| weightedlinkage.cpp | H A D | 01-Sep-2021 | 1.4 KiB | 53 | 27 |
| wilcox.cpp | H A D | 01-Sep-2021 | 7.3 KiB | 234 | 137 |
| wilcox.h | H A D | 01-Sep-2021 | 609 | 32 | 17 |
| writer.h | H A D | 01-Sep-2021 | 597 | 29 | 11 |