1# Makefile.in generated by automake 1.12.2 from Makefile.am. 2# test/data/Makefile. Generated from Makefile.in by configure. 3 4# Copyright (C) 1994-2012 Free Software Foundation, Inc. 5 6# This Makefile.in is free software; the Free Software Foundation 7# gives unlimited permission to copy and/or distribute it, 8# with or without modifications, as long as this notice is preserved. 9 10# This program is distributed in the hope that it will be useful, 11# but WITHOUT ANY WARRANTY, to the extent permitted by law; without 12# even the implied warranty of MERCHANTABILITY or FITNESS FOR A 13# PARTICULAR PURPOSE. 14 15 16 17 18am__make_dryrun = \ 19 { \ 20 am__dry=no; \ 21 case $$MAKEFLAGS in \ 22 *\\[\ \ ]*) \ 23 echo 'am--echo: ; @echo "AM" OK' | $(MAKE) -f - 2>/dev/null \ 24 | grep '^AM OK$$' >/dev/null || am__dry=yes;; \ 25 *) \ 26 for am__flg in $$MAKEFLAGS; do \ 27 case $$am__flg in \ 28 *=*|--*) ;; \ 29 *n*) am__dry=yes; break;; \ 30 esac; \ 31 done;; \ 32 esac; \ 33 test $$am__dry = yes; \ 34 } 35pkgincludedir = $(includedir)/EMBOSS 36pkglibdir = $(libdir)/EMBOSS 37pkglibexecdir = $(libexecdir)/EMBOSS 38am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd 39install_sh_DATA = $(install_sh) -c -m 644 40install_sh_PROGRAM = $(install_sh) -c 41install_sh_SCRIPT = $(install_sh) -c 42INSTALL_HEADER = $(INSTALL_DATA) 43transform = $(program_transform_name) 44NORMAL_INSTALL = : 45PRE_INSTALL = : 46POST_INSTALL = : 47NORMAL_UNINSTALL = : 48PRE_UNINSTALL = : 49POST_UNINSTALL = : 50build_triplet = x86_64-unknown-linux-gnu 51host_triplet = x86_64-unknown-linux-gnu 52subdir = test/data 53DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in 54ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 55am__aclocal_m4_deps = $(top_srcdir)/m4/axis2c.m4 \ 56 $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \ 57 $(top_srcdir)/m4/idxdbs.m4 $(top_srcdir)/m4/java.m4 \ 58 $(top_srcdir)/m4/lf_x11.m4 $(top_srcdir)/m4/libtool.m4 \ 59 $(top_srcdir)/m4/ltoptions.m4 $(top_srcdir)/m4/ltsugar.m4 \ 60 $(top_srcdir)/m4/ltversion.m4 $(top_srcdir)/m4/lt~obsolete.m4 \ 61 $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pkg.m4 \ 62 $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \ 63 $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in 64am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ 65 $(ACLOCAL_M4) 66mkinstalldirs = $(install_sh) -d 67CONFIG_HEADER = $(top_builddir)/ajax/core/config.h 68CONFIG_CLEAN_FILES = 69CONFIG_CLEAN_VPATH_FILES = 70SOURCES = 71DIST_SOURCES = 72am__can_run_installinfo = \ 73 case $$AM_UPDATE_INFO_DIR in \ 74 n|no|NO) false;; \ 75 *) (install-info --version) >/dev/null 2>&1;; \ 76 esac 77am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; 78am__vpath_adj = case $$p in \ 79 $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \ 80 *) f=$$p;; \ 81 esac; 82am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`; 83am__install_max = 40 84am__nobase_strip_setup = \ 85 srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'` 86am__nobase_strip = \ 87 for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||" 88am__nobase_list = $(am__nobase_strip_setup); \ 89 for p in $$list; do echo "$$p $$p"; done | \ 90 sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \ 91 $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \ 92 if (++n[$$2] == $(am__install_max)) \ 93 { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \ 94 END { for (dir in files) print dir, files[dir] }' 95am__base_list = \ 96 sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \ 97 sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g' 98am__uninstall_files_from_dir = { \ 99 test -z "$$files" \ 100 || { test ! -d "$$dir" && test ! -f "$$dir" && test ! -r "$$dir"; } \ 101 || { echo " ( cd '$$dir' && rm -f" $$files ")"; \ 102 $(am__cd) "$$dir" && rm -f $$files; }; \ 103 } 104am__installdirs = "$(DESTDIR)$(pkgdatadir)" 105DATA = $(pkgdata_DATA) 106DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) 107pkgdatadir = $(prefix)/share/$(PACKAGE)/test/data 108ACLOCAL = ${SHELL} /data/scratch/embossdist/missing --run aclocal-1.12 109AJAX_FIXED_ROOT = \"/data/scratch/embossdist/emboss\" 110AJAX_SYSTEM = \"Linux\" 111AMTAR = $${TAR-tar} 112ANT = /usr/bin/ant 113AR = ar 114AUTOCONF = ${SHELL} /data/scratch/embossdist/missing --run autoconf 115AUTOHEADER = ${SHELL} /data/scratch/embossdist/missing --run autoheader 116AUTOMAKE = ${SHELL} /data/scratch/embossdist/missing --run automake-1.12 117AWK = gawk 118AXIS2C_CFLAGS = 119AXIS2C_CPPFLAGS = 120AXIS2C_LDFLAGS = 121AXIS2C_LIBS = 122CC = gcc 123CCDEPMODE = depmode=gcc3 124CFLAGS = -O2 125CPP = gcc -E 126CPPFLAGS = -DAJ_LinuxLF -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 127CXX = g++ 128CXXCPP = g++ -E 129CXXDEPMODE = depmode=gcc3 130CXXFLAGS = -g -O2 131CYGPATH_W = echo 132DEFS = -DHAVE_CONFIG_H 133DEPDIR = .deps 134DEVWARN_CFLAGS = 135DLLTOOL = false 136DSYMUTIL = 137DUMPBIN = 138ECHO_C = 139ECHO_N = -n 140ECHO_T = 141EGREP = /usr/bin/grep -E 142EMBOSS_TOP = /data/scratch/embossdist 143EXEEXT = 144FGREP = /usr/bin/grep -F 145GREP = /usr/bin/grep 146HAVE_MEMMOVE = 147HAVE_STRERROR = 148INSTALL = /usr/bin/install -c 149INSTALL_DATA = ${INSTALL} -m 644 150INSTALL_PROGRAM = ${INSTALL} 151INSTALL_SCRIPT = ${INSTALL} 152INSTALL_STRIP_PROGRAM = $(install_sh) -c -s 153JAR = /usr/bin/jar 154JAVA = /usr/bin/java 155JAVAC = /usr/bin/javac 156JAVA_CFLAGS = 157JAVA_CPPFLAGS = -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -DNO_AUTH 158JAVA_LDFLAGS = 159LD = /usr/bin/ld -m elf_x86_64 160LDFLAGS = 161LIBOBJS = 162LIBS = -lm -lhpdf -lgd -lpng -lz -lm 163LIBTOOL = $(SHELL) $(top_builddir)/libtool 164LIPO = 165LN_S = ln -s 166LTLIBOBJS = 167MAKEINFO = ${SHELL} /data/scratch/embossdist/missing --run makeinfo 168MANIFEST_TOOL = : 169MKDIR_P = /usr/bin/mkdir -p 170MYSQL_CFLAGS = -I/usr/include/mysql -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -fno-strict-aliasing -fwrapv -fPIC -fPIC -g -static-libgcc -fno-omit-frame-pointer -fno-strict-aliasing -DMY_PTHREAD_FASTMUTEX=1 171MYSQL_CONFIG = /usr/bin/mysql_config 172MYSQL_CPPFLAGS = -I/usr/include/mysql 173MYSQL_LDFLAGS = -L/usr/lib64/mysql -lmysqlclient -lpthread -lz -lm -lrt -lssl -lcrypto -ldl 174MYSQL_VERSION = 5.5.32 175NM = /usr/bin/nm -B 176NMEDIT = 177OBJDUMP = objdump 178OBJEXT = o 179OTOOL = 180OTOOL64 = 181PACKAGE = EMBOSS 182PACKAGE_BUGREPORT = emboss-bug@emboss.open-bio.org 183PACKAGE_NAME = EMBOSS 184PACKAGE_STRING = EMBOSS 6.6.0 185PACKAGE_TARNAME = EMBOSS 186PACKAGE_URL = http://emboss.open-bio.org/ 187PACKAGE_VERSION = 6.6.0 188PATH_SEPARATOR = : 189PCRE_DATE = 11-Apr-2009 190PCRE_LIB_VERSION = 0:1:0 191PCRE_MAJOR = 7 192PCRE_MINOR = 9 193PCRE_POSIXLIB_VERSION = 0:0:0 194PCRE_VERSION = 7.9 195PKG_CONFIG = /usr/bin/pkg-config 196PKG_CONFIG_LIBDIR = 197PKG_CONFIG_PATH = 198POSIX_MALLOC_THRESHOLD = -DPOSIX_MALLOC_THRESHOLD=10 199POSTGRESQL_CFLAGS = -I/usr/include 200POSTGRESQL_CONFIG = /usr/bin/pg_config 201POSTGRESQL_CPPFLAGS = -I/usr/include 202POSTGRESQL_LDFLAGS = -L/usr/lib64 -lpq 203POSTGRESQL_VERSION = 9.2.4 204RANLIB = ranlib 205SED = /usr/bin/sed 206SET_MAKE = 207SHELL = /bin/sh 208STRIP = strip 209VERSION = 6.6.0 210WARN_CFLAGS = 211XLIB = -lX11 212XMKMF = 213X_CFLAGS = 214X_EXTRA_LIBS = 215X_LIBS = 216X_PRE_LIBS = -lSM -lICE 217abs_builddir = /data/scratch/embossdist/test/data 218abs_srcdir = /data/scratch/embossdist/test/data 219abs_top_builddir = /data/scratch/embossdist 220abs_top_srcdir = /data/scratch/embossdist 221ac_ct_AR = ar 222ac_ct_CC = gcc 223ac_ct_CXX = g++ 224ac_ct_DUMPBIN = 225am__include = include 226am__leading_dot = . 227am__quote = 228am__tar = $${TAR-tar} chof - "$$tardir" 229am__untar = $${TAR-tar} xf - 230bindir = ${exec_prefix}/bin 231build = x86_64-unknown-linux-gnu 232build_alias = 233build_cpu = x86_64 234build_os = linux-gnu 235build_vendor = unknown 236builddir = . 237datadir = ${datarootdir} 238datarootdir = ${prefix}/share 239docdir = ${datarootdir}/doc/${PACKAGE_TARNAME} 240dvidir = ${docdir} 241exec_prefix = ${prefix} 242host = x86_64-unknown-linux-gnu 243host_alias = 244host_cpu = x86_64 245host_os = linux-gnu 246host_vendor = unknown 247htmldir = ${docdir} 248includedir = ${prefix}/include 249infodir = ${datarootdir}/info 250install_sh = ${SHELL} /data/scratch/embossdist/install-sh 251libdir = ${exec_prefix}/lib 252libexecdir = ${exec_prefix}/libexec 253localedir = ${datarootdir}/locale 254localstatedir = ${prefix}/var 255mandir = ${datarootdir}/man 256mkdir_p = $(MKDIR_P) 257oldincludedir = /usr/include 258pdfdir = ${docdir} 259prefix = /usr/local 260program_transform_name = s,x,x, 261psdir = ${docdir} 262sbindir = ${exec_prefix}/sbin 263sharedstatedir = ${prefix}/com 264srcdir = . 265sysconfdir = ${prefix}/etc 266target_alias = 267top_build_prefix = ../../ 268top_builddir = ../.. 269top_srcdir = ../.. 270pkgdata_DATA = aaindex1.test prosite.dat prosite.doc prints.test withrefm \ 271 site.dat cutg.codon \ 272 dna.acedb dna.aln dna.asn1 dna.codata dna.embl dna.fasta \ 273 dna.fitch dna.gcg dna.gcg8 dna.genbank dna.ig dna.m-acedb \ 274 dna.m-codata dna.m-embl dna.m-fasta dna.m-fasta-long \ 275 dna.m-ncbi dna.m-strider dna.msf dna.msf8 dna.ncbi \ 276 dna.phylip dna.phylip3 dna.staden dna.strider dna.text \ 277 feat.emft feat.fasta feat.pir \ 278 mw1.dat mw2.dat mw3.dat \ 279 paamir.gff paamir.gff3 paamir.pep pax6_cdna.fasta \ 280 prot.acedb prot.codata prot.fasta prot.gcg prot.gcg8 \ 281 prot.ig prot.m-acedb prot.m-codata prot.m-fasta prot.m-nbrf \ 282 prot.m-ncbi prot.m-swiss prot.nbrf prot.ncbi prot.swiss \ 283 prot.text z83307.seq 104k.nbrf \ 284 aligna.dna alignapart.dna alignb.dna \ 285 aligna.prot alignapart.prot alignb.prot \ 286 nuc.pat nucseq.pat nucsimple.pat \ 287 tranalign.pep tranalign.seq vtest.seq opsd.msf untrimmed.seq 288 289all: all-am 290 291.SUFFIXES: 292$(srcdir)/Makefile.in: $(srcdir)/Makefile.am $(am__configure_deps) 293 @for dep in $?; do \ 294 case '$(am__configure_deps)' in \ 295 *$$dep*) \ 296 ( cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh ) \ 297 && { if test -f $@; then exit 0; else break; fi; }; \ 298 exit 1;; \ 299 esac; \ 300 done; \ 301 echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/data/Makefile'; \ 302 $(am__cd) $(top_srcdir) && \ 303 $(AUTOMAKE) --gnu test/data/Makefile 304.PRECIOUS: Makefile 305Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status 306 @case '$?' in \ 307 *config.status*) \ 308 cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \ 309 *) \ 310 echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \ 311 cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \ 312 esac; 313 314$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES) 315 cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh 316 317$(top_srcdir)/configure: $(am__configure_deps) 318 cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh 319$(ACLOCAL_M4): $(am__aclocal_m4_deps) 320 cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh 321$(am__aclocal_m4_deps): 322 323mostlyclean-libtool: 324 -rm -f *.lo 325 326clean-libtool: 327 -rm -rf .libs _libs 328install-pkgdataDATA: $(pkgdata_DATA) 329 @$(NORMAL_INSTALL) 330 @list='$(pkgdata_DATA)'; test -n "$(pkgdatadir)" || list=; \ 331 if test -n "$$list"; then \ 332 echo " $(MKDIR_P) '$(DESTDIR)$(pkgdatadir)'"; \ 333 $(MKDIR_P) "$(DESTDIR)$(pkgdatadir)" || exit 1; \ 334 fi; \ 335 for p in $$list; do \ 336 if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \ 337 echo "$$d$$p"; \ 338 done | $(am__base_list) | \ 339 while read files; do \ 340 echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(pkgdatadir)'"; \ 341 $(INSTALL_DATA) $$files "$(DESTDIR)$(pkgdatadir)" || exit $$?; \ 342 done 343 344uninstall-pkgdataDATA: 345 @$(NORMAL_UNINSTALL) 346 @list='$(pkgdata_DATA)'; test -n "$(pkgdatadir)" || list=; \ 347 files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \ 348 dir='$(DESTDIR)$(pkgdatadir)'; $(am__uninstall_files_from_dir) 349tags: TAGS 350TAGS: 351 352ctags: CTAGS 353CTAGS: 354 355cscope cscopelist: 356 357 358distdir: $(DISTFILES) 359 @srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ 360 topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \ 361 list='$(DISTFILES)'; \ 362 dist_files=`for file in $$list; do echo $$file; done | \ 363 sed -e "s|^$$srcdirstrip/||;t" \ 364 -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \ 365 case $$dist_files in \ 366 */*) $(MKDIR_P) `echo "$$dist_files" | \ 367 sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \ 368 sort -u` ;; \ 369 esac; \ 370 for file in $$dist_files; do \ 371 if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \ 372 if test -d $$d/$$file; then \ 373 dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \ 374 if test -d "$(distdir)/$$file"; then \ 375 find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \ 376 fi; \ 377 if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \ 378 cp -fpR $(srcdir)/$$file "$(distdir)$$dir" || exit 1; \ 379 find "$(distdir)/$$file" -type d ! -perm -700 -exec chmod u+rwx {} \;; \ 380 fi; \ 381 cp -fpR $$d/$$file "$(distdir)$$dir" || exit 1; \ 382 else \ 383 test -f "$(distdir)/$$file" \ 384 || cp -p $$d/$$file "$(distdir)/$$file" \ 385 || exit 1; \ 386 fi; \ 387 done 388check-am: all-am 389check: check-am 390all-am: Makefile $(DATA) 391installdirs: 392 for dir in "$(DESTDIR)$(pkgdatadir)"; do \ 393 test -z "$$dir" || $(MKDIR_P) "$$dir"; \ 394 done 395install: install-am 396install-exec: install-exec-am 397install-data: install-data-am 398uninstall: uninstall-am 399 400install-am: all-am 401 @$(MAKE) $(AM_MAKEFLAGS) install-exec-am install-data-am 402 403installcheck: installcheck-am 404install-strip: 405 if test -z '$(STRIP)'; then \ 406 $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \ 407 install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \ 408 install; \ 409 else \ 410 $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \ 411 install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \ 412 "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \ 413 fi 414mostlyclean-generic: 415 416clean-generic: 417 418distclean-generic: 419 -test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES) 420 -test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES) 421 422maintainer-clean-generic: 423 @echo "This command is intended for maintainers to use" 424 @echo "it deletes files that may require special tools to rebuild." 425clean: clean-am 426 427clean-am: clean-generic clean-libtool mostlyclean-am 428 429distclean: distclean-am 430 -rm -f Makefile 431distclean-am: clean-am distclean-generic 432 433dvi: dvi-am 434 435dvi-am: 436 437html: html-am 438 439html-am: 440 441info: info-am 442 443info-am: 444 445install-data-am: install-pkgdataDATA 446 447install-dvi: install-dvi-am 448 449install-dvi-am: 450 451install-exec-am: 452 453install-html: install-html-am 454 455install-html-am: 456 457install-info: install-info-am 458 459install-info-am: 460 461install-man: 462 463install-pdf: install-pdf-am 464 465install-pdf-am: 466 467install-ps: install-ps-am 468 469install-ps-am: 470 471installcheck-am: 472 473maintainer-clean: maintainer-clean-am 474 -rm -f Makefile 475maintainer-clean-am: distclean-am maintainer-clean-generic 476 477mostlyclean: mostlyclean-am 478 479mostlyclean-am: mostlyclean-generic mostlyclean-libtool 480 481pdf: pdf-am 482 483pdf-am: 484 485ps: ps-am 486 487ps-am: 488 489uninstall-am: uninstall-pkgdataDATA 490 491.MAKE: install-am install-strip 492 493.PHONY: all all-am check check-am clean clean-generic clean-libtool \ 494 distclean distclean-generic distclean-libtool distdir dvi \ 495 dvi-am html html-am info info-am install install-am \ 496 install-data install-data-am install-dvi install-dvi-am \ 497 install-exec install-exec-am install-html install-html-am \ 498 install-info install-info-am install-man install-pdf \ 499 install-pdf-am install-pkgdataDATA install-ps install-ps-am \ 500 install-strip installcheck installcheck-am installdirs \ 501 maintainer-clean maintainer-clean-generic mostlyclean \ 502 mostlyclean-generic mostlyclean-libtool pdf pdf-am ps ps-am \ 503 uninstall uninstall-am uninstall-pkgdataDATA 504 505 506# Tell versions [3.59,3.63) of GNU make to not export all variables. 507# Otherwise a system limit (for SysV at least) may be exceeded. 508.NOEXPORT: 509