1[Templates] 2DFL_TABLE_ROW = <tr id=\"dtr_<@dflnFrm_id@>\" ind=\"<@dfln_blast_rank@>\" class=\"<@trtp@> dflLnk\" > \ 3<td class=\"l c0\"><span class=\"ind\"><@dfln_blast_rank@></span><input type=\"checkbox\" id=\"chk_<@dfln_blast_rank@>\" class=\"cb\" name=\"getSeqGi\" value=\"<@dfln_id@>\" onclick=\"configDescrLinks(event,this)\" /><label for=\"chk_<@dfln_blast_rank@>\" class=\"accsb\">Select seq <@dflnAccs@></label></td> \ 4<td class=\"lim l c2\"><div class=\"lim n\"><a title=\"Go to alignment for <@full_dfln_defline@>\" class=\"deflnDesc\" hsp=\"<@dfln_hspnum@>\" len=\"<@dfln_alnLen@>\" ind=\"<@dfln_blast_rank@>\" accs=\"<@dflnAccs@>\" seqFSTA=\"<@dflnFASTA_id@>\" gi=\"<@dfln_id@>\" seqID=\"<@dflnFrm_id@>\" id=\"deflnDesc_<@dfln_blast_rank@>\" onclick=\"DisplayAlignFromDescription(this);\" href=\"#alnHdr_<@dflnFrm_id@>\"><@dfln_defline@></a></div></td> \ 5<td class=\"c3\"><@score_info@></td><td class=\"c4\"><@total_bit_string@></td><td class=\"c5\"><@percent_coverage@>%</td><td class=\"c6\"><@evalue_string@></td><td class=\"c7\"><@percent_identity@>%</td> \ 6<td class=\"c1 l lim\"><@seq_info@></td></tr> 7DFL_TABLE_SCORE_INFO = <@bit_string@> 8DFL_TABLE_SEQ_INFO = <a href=\"<@dfln_url@>\" class=\"dflSeq\" target=\"lnk<@dfln_rid@>\" title=\"Show report for <@dfln_seqid@>\"><@dfln_gi@><@dfln_seqid@></a> 9 10BLAST_ALIGN_HEADER = \ 11<div class=\"alnHdr cnf\" id=\"alnHdr_<@alnSeqGi@>\" seqID=\"<@alnSeqGi@>\" accs=\"<@firstSeqID@>\"> \ 12<a name=\"<@alnSeqGi@>\"></a> \ 13<a href=\"#dlgDwnl_<@alnSeqGi@>\" data-jig=\"ncbipopper\" class=\"toolsCtr dnld dialog\" data-jigconfig=\"hasArrow:'true',arrowDirection:'top',closeEvent: 'click', openEvent: 'click', destPosition: 'top center', triggerPosition: 'bottom right'\" id=\"alnDwnld_<@alnSeqGi@>\" title=\"Download information for <@firstSeqID@>\"><span>Download</span></a> \ 14<div id=\"dlgDwnl_<@alnSeqGi@>\" class=\"popDl\"> \ 15<div><input type=\"radio\" name=\"dwn_<@alnSeqGi@>\" checked=\"checked\" id=\"dwFST_<@alnSeqGi@>\" fstaDWType=\"complete\" sbFunc=\"initDownLoadFSTA\" /><label class=\"shownInl\" for=\"dwFST_<@alnSeqGi@>\">FASTA (complete sequence)</label></div> \ 16<div><input type=\"radio\" name=\"dwn_<@alnSeqGi@>\" id=\"dwFSTAl_<@alnSeqGi@>\" fstaDWType=\"range\" sbFunc=\"initDownLoadFSTA\" /><label class=\"shownInl\" for=\"dwFSTAl_<@alnSeqGi@>\">FASTA (aligned sequences)</label></div> \ 17<div class=\"<@dwGnbn@>\"><input type=\"radio\" name=\"dwn_<@alnSeqGi@>\" id=\"dwGenBank_<@alnSeqGi@>\" getGi=\"<@alnSeqGi@>\" sbName=\"id\" url=\"https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?rettype=gb&retmode=text\" /><label class=\"shownInl\" for=\"dwGenBank_<@alnSeqGi@>\">GenBank (complete sequence)</label></div> \ 18<div> \ 19<button class=\"cfg\" id=\"dw_cont_<@alnSeqGi@>\">Continue</button> \ 20<button class=\"cfg cnc\" >Cancel</button> \ 21</div> \ 22</div> <!-- dsDownload --> \ 23<span class=\"csLinks\" id=\"csLinks_<@alnSeqGi@>\"><@alnCustomLinks@></span> \ 24<@sortInfo@> \ 25<span class=\"alnSeqLinks\"> \ 26<a class=\"gbd toolsCtr navNext\" ref=\"ordinalpos=<@aln_ord_pos@>&currseq=<@alnSeqGi@>\" id=\"alnNxt_<@alnSeqGi@>\" onclick=\"goToNextAlign('dtr_<@alnSeqGi@>',true);\"><span>Next</span></a> \ 27<a class=\"gbd toolsCtr navPrev\" ref=\"ordinalpos=<@aln_ord_pos@>&currseq=<@alnSeqGi@>\" id=\"alnPrv_<@alnSeqGi@>\" onclick=\"goToNextAlign('dtr_<@alnSeqGi@>',false);\"><span>Previous</span></a> \ 28<a class=\"gbd toolsCtr navBack\" title=\"Go to definition line for <@firstSeqID@>\" id=\"alnDsc_<@alnSeqGi@>\" onclick=\"goToDefLine('dtr_<@alnSeqGi@>');\" href=\"#dtr_<@alnSeqGi@>\"><span>Descriptions</span></a> \ 29</span> \ 30</div> \ 31<div class=\"oneSeqAln\" id=\"aln_<@alnSeqGi@>\"> \ 32<div id=\"dln_<@alnSeqGi@>\"> \ 33<@aln_deflines@> \ 34</div> \ 35<div class=\"relInf\" id=\"relInf_<@alnSeqGi@>\"><label>Related Information</label><@alnLinkOutLinks@></div> \ 36<div class=\"alnAll\" id=\"alnAll_<@alnSeqGi@>\"> 37 38 39BLAST_ALIGN_PARAMS = \ 40<div id=\"hd_<@alnSeqGi@>_<@aln_curr_num@>\"> \ 41<div class=\"dflLnk hsp\"><span class=\"alnRn\"><label>Range <@aln_curr_num@>: <@fromHSP@> to <@toHSP@></label><span class=\"<@multiHSP@>\" id=\"rng_<@alnSeqGi@>\"><@alnHSPLinks@></span></span> \ 42<span id=\"hsp<@alnSeqGi@>_<@aln_curr_num@>\" class=\"alnParLinks\"> \ 43<a class=\"gbd toolsCtr navNext\" <@aln_hide_next@> title=\"Go to next match #<@aln_next_num@> for <@firstSeqID@>\" onmouseover=\"scan(this)\" ref=\"ordinalpos=<@aln_curr_num@>&currseq=<@alnSeqGi@>\" onclick=\"goToNextHSP(this,true)\"><span>Next Match</span></a> \ 44<a class=\"gbd toolsCtr navPrev\" <@aln_hide_prev@> title=\"Go to previous match #<@aln_prev_num@> for <@firstSeqID@>\" onmouseover=\"scan(this)\" ref=\"ordinalpos=<@aln_curr_num@>&currseq=<@alnSeqGi@>\" onclick=\"goToNextHSP(this,false)\"><span>Previous Match</span></a> \ 45<a class=\"gbd toolsCtr navBack <@aln_hide_fst@>\" href=\"#hsp<@alnSeqGi@>_1\" title=\"Go to first match for <@firstSeqID@>\"><span>First Match</span></a> \ 46</span> \ 47</div> \ 48<@align_params@> \ 49<div class=\"dflLnk aln_feat <@aln_feat_show@>\"><label>Features:</label><div><@all_aln_features@></div></div> \ 50</div> 51 52ALIGN_PARAMS_NUC = \ 53<table class=\"alnParams\"> \ 54<caption class=\"hdnHeader\">Alignment statistics for match #<@aln_curr_num@></caption> \ 55<tr> \ 56<th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th><th class=\"aln_frame <@aln_frame_show@>\">Frame</th> \ 57</tr> \ 58<tr> \ 59<td><@aln_score@> bits(<@aln_score_bits@>)</td> \ 60<td><@aln_eval@><span class=\"sumN <@sumNshow@>\">(<@aln_sumN@>)</span></td> \ 61<td><@aln_match@>(<@aln_ident@>%)</td> \ 62<td><@aln_gaps@>(<@aln_gaps_prc@>%)</td> \ 63<td><@aln_strand@></td> \ 64<td class=\"aln_frame <@aln_frame_show@>\"><@aln_frame@></td> \ 65</tr></table> 66 67 68ALIGN_PARAMS_PROT = \ 69<table class=\"alnParams\"> \ 70<caption class=\"hdnHeader\">Alignment statistics for match #<@aln_curr_num@></caption> \ 71<tr> \ 72<th>Score</th><th>Expect</th><th class=\"cbs_md <@aln_meth_hide@>\">Method</th><th>Identities</th><th>Positives</th><th>Gaps</th><th class=\"aln_frame <@aln_frame_show@>\">Frame</th> \ 73</tr> \ 74<tr> \ 75<td><@aln_score@> bits(<@aln_score_bits@>)</td> \ 76<td><@aln_eval@><span class=\"sumN <@sumNshow@>\">(<@aln_sumN@>)</span></td> \ 77<td class=\"<@aln_meth_hide@>\"><@aln_meth@></td> \ 78<td><@aln_match@>(<@aln_ident@>%)</td> \ 79<td><@aln_pos@>(<@aln_pos_prc@>%)</td> \ 80<td><@aln_gaps@>(<@aln_gaps_prc@>%)</td> \ 81<td class=\"aln_frame <@aln_frame_show@>\"><@aln_frame@></td> \ 82</tr> \ 83</table> 84 85 86SORT_ALIGNS_SEQ = \ 87<div class=\"seqlinks alnDflLn alnSortSeq\"><label>Sort by:</label> \ 88<select id=\"sa_<@alnSeqGi@>\" onchange=\"SortHSPAlnSel(event,this)\"> \ 89<option value=\"0\">E value</option> \ 90<option value=\"1\"> Score</option> \ 91<option value=\"3\">Percent identity</option> \ 92<option value=\"2\">Query start position</option> \ 93<option value=\"4\">Subject start position</option> \ 94</select> \ 95</div> 96 97ALN_FEATURES = <@aln_feat_info@> 98 99ALN_FEATURES_LINK = <a href=\"<@aln_feat_url@>\"><@aln_feat@></a> 100 101ALN_DEFLINE_ROW = \ 102<div class=\"dlfRow\"> \ 103<@alnTitle@> \ 104<div><label>Sequence ID: </label><@seq_info@><span class=\"<@frstDfl@> r\"><label>Length: </label><@alnSeqLength@><label>Number of Matches: </label><@alnHspNum@></span></div> \ 105</div> 106 107ALN_DEFLINE_TITLES_LNK = <h4><a href=\"#\" class=\"jtg resArrowLinkW ui-ncbitoggler\" data-jig=\"ncbitoggler\" title=\"Sequences identical to <@firstSeqID@>\" >See <@titleNum@> more title(s)</a></h4> 108 109ALN_DEFLINE_TITLES = \ 110<div class=\"ui-helper-reset\" aria-live=\"assertive\" > \ 111<div class=\"ui-ncbitoggler-slave\"> \ 112<@seqTitles@> \ 113</div> \ 114</div> 115 116ALN_DEFLINE_SEQ_INFO = <a href=\"<@aln_url@>\" target=\"lnk<@aln_rid@>\" title=\"Show report for <@aln_seqid@>\"><@aln_gi@><@aln_seqid@></a> 117 118BLAST_ALIGN_ROWS = \ 119<div id=\"ar_<@alnSeqGi@>_<@aln_curr_num@>\"> \ 120<pre> \ 121<@align_rows@> \ 122</pre> \ 123</div> 124 125BLAST_ALIGN_ROWS_LST = \ 126<div id=\"ar_<@alnSeqGi@>_<@aln_curr_num@>\"> \ 127<pre> \ 128<@align_rows@> \ 129</pre> \ 130</div> \ 131</div> <!-- alnAll_<@alnSeqGi@> --> \ 132</div> <!-- aln_<@alnSeqGi@> --> 133 134[Errors] 135NoResultsFound=1:No results found. 136InvailInputFormat=2:Invalid input format for BLAST Archive. 137ErrorBlastArchive=3:Error processing BLAST Archive. 138ErrorAccessingFile=4:Error accesing blast archive #filename. 139InvalidQueryIndex=5:Invalid query index. 140NetConError=6:Network connection error. 141