1 /*===========================================================================
2 *
3 *                            PUBLIC DOMAIN NOTICE
4 *               National Center for Biotechnology Information
5 *
6 *  This software/database is a "United States Government Work" under the
7 *  terms of the United States Copyright Act.  It was written as part of
8 *  the author's official duties as a United States Government employee and
9 *  thus cannot be copyrighted.  This software/database is freely available
10 *  to the public for use. The National Library of Medicine and the U.S.
11 *  Government have not placed any restriction on its use or reproduction.
12 *
13 *  Although all reasonable efforts have been taken to ensure the accuracy
14 *  and reliability of the software and data, the NLM and the U.S.
15 *  Government do not and cannot warrant the performance or results that
16 *  may be obtained by using this software or data. The NLM and the U.S.
17 *  Government disclaim all warranties, express or implied, including
18 *  warranties of performance, merchantability or fitness for any particular
19 *  purpose.
20 *
21 *  Please cite the author in any work or product based on this material.
22 *
23 * ===========================================================================
24 *
25 */
26 
27 #ifndef _h_sra_statistics_
28 #define _h_sra_statistics_
29 
30 typedef struct SRA_Statistics SRA_Statistics;
31 #ifndef _h_ngs_statistics_
32 #define NGS_STATISTICS SRA_Statistics
33 #include "NGS_Statistics.h"
34 #endif
35 
36 #ifdef __cplusplus
37 extern "C" {
38 #endif
39 
40 /*--------------------------------------------------------------------------
41  * forwards
42  */
43 
44 struct VTable;
45 struct VDatabase;
46 
47 /*--------------------------------------------------------------------------
48  * SRA_Statistics
49  */
50 
51 NGS_Statistics * SRA_StatisticsMake ( ctx_t ctx );
52 
53 void SRA_StatisticsLoadTableStats ( NGS_Statistics * self, ctx_t ctx, const struct VTable* tbl, const char* prefix );
54 
55 void SRA_StatisticsLoadBamHeader ( NGS_Statistics * self, ctx_t ctx, const struct VDatabase * db );
56 
57 #ifdef __cplusplus
58 }
59 #endif
60 
61 #endif /* _h_sra_statistics_ */
62