embl_single_record - OpenGrok cross reference for /dports/biology/py-scikit-bio/scikit-bio-0.5.6/skbio/io/format/tests/data/embl_single_record

ID   M14399; SV 1; linear; mRNA; STD; PRO; 63 BP.
XX
AC   M14399;
XX
DT   16-JUL-1988 (Rel. 16, Created)
DT   02-SEP-1999 (Rel. 60, Last updated, Version 3)
XX
DE   E.coli alkaline phosphatase signal mRNA, 5' end.
XX
KW   alkaline phosphatase; signal peptide.
XX
OS   Escherichia coli
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
XX
RN   [1]
RP   1-63
RX   DOI; 10.1016/0378-1119(85)90319-1.
RX   PUBMED; 3912261.
RA   Gray G.L., Baldridge J.S., McKeown K.S., Heyneker H.L., Chang C.N.;
RT   "Periplasmic production of correctly processed human growth hormone in
RT   Escherichia coli: natural and bacterial signal sequences are
RT   interchangeable";
RL   Gene 39(2-3):247-254(1985).
XX
DR   MD5; c9b40131b8622946b5aafdf5473b3d43.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..63
FT                   /db_xref="taxon:562"
FT                   /mol_type="mRNA"
FT                   /organism="Escherichia coli"
FT   CDS             1..>63
FT                   /db_xref="GOA:P00634"
FT                   /db_xref="InterPro:IPR001952"
FT                   /db_xref="InterPro:IPR017849"
FT                   /db_xref="InterPro:IPR017850"
FT                   /db_xref="InterPro:IPR018299"
FT                   /db_xref="PDB:1AJA"
FT                   /db_xref="PDB:1AJB"
FT                   /db_xref="PDB:1AJC"
FT                   /db_xref="PDB:1AJD"
FT                   /db_xref="PDB:1ALH"
FT                   /db_xref="PDB:1ALI"
FT                   /db_xref="PDB:1ALJ"
FT                   /db_xref="PDB:1ALK"
FT                   /db_xref="PDB:1ANI"
FT                   /db_xref="PDB:1ANJ"
FT                   /db_xref="PDB:1B8J"
FT                   /db_xref="PDB:1ED8"
FT                   /db_xref="PDB:1ED9"
FT                   /db_xref="PDB:1ELX"
FT                   /db_xref="PDB:1ELY"
FT                   /db_xref="PDB:1ELZ"
FT                   /db_xref="PDB:1EW8"
FT                   /db_xref="PDB:1EW9"
FT                   /db_xref="PDB:1HJK"
FT                   /db_xref="PDB:1HQA"
FT                   /db_xref="PDB:1KH4"
FT                   /db_xref="PDB:1KH5"
FT                   /db_xref="PDB:1KH7"
FT                   /db_xref="PDB:1KH9"
FT                   /db_xref="PDB:1KHJ"
FT                   /db_xref="PDB:1KHK"
FT                   /db_xref="PDB:1KHL"
FT                   /db_xref="PDB:1KHN"
FT                   /db_xref="PDB:1URA"
FT                   /db_xref="PDB:1URB"
FT                   /db_xref="PDB:1Y6V"
FT                   /db_xref="PDB:1Y7A"
FT                   /db_xref="PDB:2ANH"
FT                   /db_xref="PDB:2G9Y"
FT                   /db_xref="PDB:2GA3"
FT                   /db_xref="PDB:2MLX"
FT                   /db_xref="PDB:2MLY"
FT                   /db_xref="PDB:2MLZ"
FT                   /db_xref="PDB:3BDF"
FT                   /db_xref="PDB:3BDG"
FT                   /db_xref="PDB:3BDH"
FT                   /db_xref="PDB:3CMR"
FT                   /db_xref="PDB:3DPC"
FT                   /db_xref="PDB:3DYC"
FT                   /db_xref="PDB:3TG0"
FT                   /db_xref="PDB:4KM4"
FT                   /db_xref="PDB:4YR1"
FT                   /db_xref="PDB:5C66"
FT                   /db_xref="PDB:5GAD"
FT                   /db_xref="PDB:5GAF"
FT                   /db_xref="PDB:5GAG"
FT                   /db_xref="PDB:5GAH"
FT                   /db_xref="PDB:5JTL"
FT                   /db_xref="PDB:5JTM"
FT                   /db_xref="PDB:5JTN"
FT                   /db_xref="PDB:5JTO"
FT                   /db_xref="PDB:5JTP"
FT                   /db_xref="UniProtKB/Swiss-Prot:P00634"
FT                   /note="alkaline phosphatase signal peptide"
FT                   /codon_start=1
FT                   /protein_id="AAA23431.1"
FT                   /transl_table=11
FT                   /translation="MKQSTIALAVLPLLFTPVTKA"
XX
SQ   Sequence 63 BP; 17 A; 17 C; 12 G; 17 T; 0 other;
     gtgaaacaaa gcactattgc actggctgtc ttaccgttac tgtttacccc tgtgacaaaa        60
     gcc                                                                      63
//