1 /**
2  * UGENE - Integrated Bioinformatics Tools.
3  * Copyright (C) 2008-2021 UniPro <ugene@unipro.ru>
4  * http://ugene.net
5  *
6  * This program is free software; you can redistribute it and/or
7  * modify it under the terms of the GNU General Public License
8  * as published by the Free Software Foundation; either version 2
9  * of the License, or (at your option) any later version.
10  *
11  * This program is distributed in the hope that it will be useful,
12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
14  * GNU General Public License for more details.
15  *
16  * You should have received a copy of the GNU General Public License
17  * along with this program; if not, write to the Free Software
18  * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
19  * MA 02110-1301, USA.
20  */
21 
22 #ifndef _ASSEMBLY_DBI_TEST_UTIL_H_
23 #define _ASSEMBLY_DBI_TEST_UTIL_H_
24 
25 #include <U2Core/U2Assembly.h>
26 
27 namespace U2 {
28 
29 class AssemblyDbiTestUtil {
30 public:
31     static bool compareCigar(const QList<U2CigarToken> &c1, const QList<U2CigarToken> &c2);
32 
33     static bool compareReads(const U2AssemblyRead &r1, const U2AssemblyRead &r2);
34 
35     static bool findRead(const U2AssemblyRead &subj, QList<U2AssemblyRead> &reads);
36 
37     static bool compareReadLists(U2DbiIterator<U2AssemblyRead> *iter, QList<U2AssemblyRead> &expectedReads);
38 
39     static void var2readList(const QVariantList &varList, QList<U2AssemblyRead> &reads);
40 
41 public:
42     static const char *ERR_INVALID_ASSEMBLY_ID;
43 };
44 
45 }  // namespace U2
46 
47 Q_DECLARE_METATYPE(U2::U2AssemblyRead);
48 
49 #endif
50