1 /** 2 * UGENE - Integrated Bioinformatics Tools. 3 * Copyright (C) 2008-2021 UniPro <ugene@unipro.ru> 4 * http://ugene.net 5 * 6 * This program is free software; you can redistribute it and/or 7 * modify it under the terms of the GNU General Public License 8 * as published by the Free Software Foundation; either version 2 9 * of the License, or (at your option) any later version. 10 * 11 * This program is distributed in the hope that it will be useful, 12 * but WITHOUT ANY WARRANTY; without even the implied warranty of 13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 14 * GNU General Public License for more details. 15 * 16 * You should have received a copy of the GNU General Public License 17 * along with this program; if not, write to the Free Software 18 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, 19 * MA 02110-1301, USA. 20 */ 21 22 #ifndef _ASSEMBLY_DBI_TEST_UTIL_H_ 23 #define _ASSEMBLY_DBI_TEST_UTIL_H_ 24 25 #include <U2Core/U2Assembly.h> 26 27 namespace U2 { 28 29 class AssemblyDbiTestUtil { 30 public: 31 static bool compareCigar(const QList<U2CigarToken> &c1, const QList<U2CigarToken> &c2); 32 33 static bool compareReads(const U2AssemblyRead &r1, const U2AssemblyRead &r2); 34 35 static bool findRead(const U2AssemblyRead &subj, QList<U2AssemblyRead> &reads); 36 37 static bool compareReadLists(U2DbiIterator<U2AssemblyRead> *iter, QList<U2AssemblyRead> &expectedReads); 38 39 static void var2readList(const QVariantList &varList, QList<U2AssemblyRead> &reads); 40 41 public: 42 static const char *ERR_INVALID_ASSEMBLY_ID; 43 }; 44 45 } // namespace U2 46 47 Q_DECLARE_METATYPE(U2::U2AssemblyRead); 48 49 #endif 50