1include (workflow_designer.pri)
2
3# Input
4HEADERS += src/ActorCfgFilterProxyModel.h \
5           src/ActorCfgModel.h \
6           src/BreakpointManagerView.h \
7           src/ChooseItemDialog.h \
8           src/CreateScriptWorker.h \
9           src/DashboardsManagerDialog.h \
10           src/GalaxyConfigConfigurationDialogImpl.h \
11           src/ImportSchemaDialog.h \
12           src/InvestigationDataModel.h \
13           src/ItemViewStyle.h \
14           src/PortAliasesConfigurationDialog.h \
15           src/SampleActionsManager.h \
16           src/SceneSerializer.h \
17           src/SchemaAliasesConfigurationDialogImpl.h \
18           src/StartupDialog.h \
19           src/TableViewTabKey.h \
20           src/WorkflowDesignerPlugin.h \
21           src/WorkflowDocument.h \
22           src/WorkflowEditor.h \
23           src/WorkflowEditorDelegates.h \
24           src/WorkflowInvestigationWidgetsController.h \
25           src/WorkflowMetaDialog.h \
26           src/WorkflowPalette.h \
27           src/WorkflowSamples.h \
28           src/WorkflowSceneIOTasks.h \
29           src/WorkflowSettingsController.h \
30           src/WorkflowTabView.h \
31           src/WorkflowViewController.h \
32           src/WorkflowViewItems.h \
33           src/cmdline/GalaxyConfigTask.h \
34           src/cmdline/WorkflowCMDLineTasks.h \
35           src/debug_messages_translation/AnnotationsMessageTranslator.h \
36           src/debug_messages_translation/AssemblyMessageTranslator.h \
37           src/debug_messages_translation/BaseMessageTranslator.h \
38           src/debug_messages_translation/MultipleAlignmentMessageTranslator.h \
39           src/debug_messages_translation/SequenceMessageTranslator.h \
40           src/debug_messages_translation/VariationTrackMessageTranslator.h \
41           src/debug_messages_translation/WorkflowDebugMessageParserImpl.h \
42           src/library/AminoTranslationWorker.h \
43           src/library/AssemblyToSequenceWorker.h \
44           src/library/BaseDocWriter.h \
45           src/library/CDSearchWorker.h \
46           src/library/CfgExternalToolModel.h \
47           src/library/CmdlineBasedWorkerValidator.h \
48           src/library/ConvertFilesFormatWorker.h \
49           src/library/ConvertSnpeffVariationsToAnnotationsWorker.h \
50           src/library/CoreLib.h \
51           src/library/CustomExternalToolLogParser.h \
52           src/library/CustomExternalToolRunTaskHelper.h \
53           src/library/DocActors.h \
54           src/library/DocWorkers.h \
55           src/library/ExternalProcessWorker.h \
56           src/library/ExtractAssemblyCoverageWorker.h \
57           src/library/ExtractConsensusWorker.h \
58           src/library/ExtractMSAConsensusWorker.h \
59           src/library/FilterAnnotationsByQualifierWorker.h \
60           src/library/FilterAnnotationsWorker.h \
61           src/library/FindWorker.h \
62           src/library/GenericReadActor.h \
63           src/library/GenericReadWorker.h \
64           src/library/GetFileListWorker.h \
65           src/library/GetReadListWorker.h \
66           src/library/GroupWorker.h \
67           src/library/ImportAnnotationsWorker.h \
68           src/library/IncludedProtoFactoryImpl.h \
69           src/library/FASTQWorkersLibrary.h \
70           src/library/FilterBamWorker.h \
71           src/library/MarkSequenceWorker.h \
72           src/library/MergeBamWorker.h \
73           src/library/MSA2SequenceWorker.h \
74           src/library/MultiplexerWorker.h \
75           src/library/PassFilterWorker.h \
76           src/library/ReadAnnotationsWorker.h \
77           src/library/ReadAssemblyWorker.h \
78           src/library/ReadVariationWorker.h \
79           src/library/RemoteDBFetcherWorker.h \
80           src/library/RenameChromosomeInVariationWorker.h \
81           src/library/ReverseComplementWorker.h \
82           src/library/RmdupBamWorker.h \
83           src/library/SchemaWorker.h \
84           src/library/ScriptWorker.h \
85           src/library/SequenceQualityTrimWorker.h \
86           src/library/SequenceSplitWorker.h \
87           src/library/SequencesToMSAWorker.h \
88           src/library/StatisticWorkers.h \
89           src/library/SortBamWorker.h \
90           src/library/Text2SequenceWorker.h \
91           src/library/WriteAnnotationsWorker.h \
92           src/library/WriteAssemblyWorkers.h \
93           src/library/WriteVariationWorker.h \
94           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizard.h \
95           src/tasks/ReadAssemblyTask.h \
96           src/tasks/RenameChromosomeInVariationTask.h \
97           src/tasks/SequenceQualityTrimTask.h \
98           src/util/CustomWorkerUtils.h \
99           src/util/DatasetsCountValidator.h \
100           src/util/DatasetValidator.h \
101           src/util/GrouperActionUtils.h \
102           src/util/RequiredSlotsValidator.h \
103           src/util/SaveSchemaImageUtils.h \
104           src/util/WorkerNameValidator.h \
105           src/util/WriteAnnotationsValidator.h \
106           src/util/WriteSequenceValidator.h
107
108FORMS += src/ChooseItemDialog.ui \
109           src/CreateScriptBlockDialog.ui \
110           src/DashboardsManagerDialog.ui \
111           src/GalaxyConfigConfigurationDialog.ui \
112           src/ImportSchemaDialog.ui \
113           src/PaletteWidget.ui \
114           src/PortAliasesConfigurationDialog.ui \
115           src/SchemaAliasesConfigurationDialog.ui \
116           src/StartupDialog.ui \
117           src/WorkflowEditorWidget.ui \
118           src/WorkflowMetaDialog.ui \
119           src/WorkflowSettingsWidget.ui \
120           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardCommandPage.ui \
121           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardElementAppearancePage.ui \
122           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardGeneralSettingsPage.ui \
123           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardInputDataPage.ui \
124           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardOutputDataPage.ui \
125           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardParametersPage.ui \
126           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizardSummaryPage.ui
127
128SOURCES += src/ActorCfgFilterProxyModel.cpp \
129           src/ActorCfgModel.cpp \
130           src/BreakpointManagerView.cpp \
131           src/ChooseItemDialog.cpp \
132           src/CreateScriptWorker.cpp \
133           src/DashboardsManagerDialog.cpp \
134           src/GalaxyConfigConfigurationDialogImpl.cpp \
135           src/ImportSchemaDialog.cpp \
136           src/InvestigationDataModel.cpp \
137           src/ItemViewStyle.cpp \
138           src/PortAliasesConfigurationDialog.cpp \
139           src/SampleActionsManager.cpp \
140           src/SceneSerializer.cpp \
141           src/SchemaAliasesConfigurationDialogImpl.cpp \
142           src/StartupDialog.cpp \
143           src/TableViewTabKey.cpp \
144           src/WorkflowDesignerPlugin.cpp \
145           src/WorkflowDocument.cpp \
146           src/WorkflowEditor.cpp \
147           src/WorkflowEditorDelegates.cpp \
148           src/WorkflowInvestigationWidgetsController.cpp \
149           src/WorkflowMetaDialog.cpp \
150           src/WorkflowPalette.cpp \
151           src/WorkflowSamples.cpp \
152           src/WorkflowSceneIOTasks.cpp \
153           src/WorkflowSettingsController.cpp \
154           src/WorkflowTabView.cpp \
155           src/WorkflowViewController.cpp \
156           src/WorkflowViewItems.cpp \
157           src/cmdline/GalaxyConfigTask.cpp \
158           src/cmdline/WorkflowCMDLineTasks.cpp \
159           src/debug_messages_translation/AnnotationsMessageTranslator.cpp \
160           src/debug_messages_translation/AssemblyMessageTranslator.cpp \
161           src/debug_messages_translation/BaseMessageTranslator.cpp \
162           src/debug_messages_translation/MultipleAlignmentMessageTranslator.cpp \
163           src/debug_messages_translation/SequenceMessageTranslator.cpp \
164           src/debug_messages_translation/VariationTrackMessageTranslator.cpp \
165           src/debug_messages_translation/WorkflowDebugMessageParserImpl.cpp \
166           src/library/AminoTranslationWorker.cpp \
167           src/library/AssemblyToSequenceWorker.cpp \
168           src/library/BaseDocWriter.cpp \
169           src/library/CDSearchWorker.cpp \
170           src/library/CfgExternalToolModel.cpp \
171           src/library/CmdlineBasedWorkerValidator.cpp \
172           src/library/ConvertFilesFormatWorker.cpp \
173           src/library/ConvertSnpeffVariationsToAnnotationsWorker.cpp \
174           src/library/CoreLib.cpp \
175           src/library/DocActors.cpp \
176           src/library/DocWorkers.cpp \
177           src/library/ExternalProcessWorker.cpp \
178           src/library/ExtractAssemblyCoverageWorker.cpp \
179           src/library/ExtractConsensusWorker.cpp \
180           src/library/ExtractMSAConsensusWorker.cpp \
181           src/library/FASTQWorkersLibrary.cpp \
182           src/library/FilterAnnotationsWorker.cpp \
183           src/library/FilterAnnotationsByQualifierWorker.cpp \
184           src/library/FilterBamWorker.cpp \
185           src/library/FindWorker.cpp \
186           src/library/GenericReadActor.cpp \
187           src/library/GenericReadWorker.cpp \
188           src/library/GetFileListWorker.cpp \
189           src/library/GetReadListWorker.cpp \
190           src/library/GroupWorker.cpp \
191           src/library/ImportAnnotationsWorker.cpp \
192           src/library/IncludedProtoFactoryImpl.cpp \
193           src/library/MarkSequenceWorker.cpp \
194           src/library/MergeBamWorker.cpp \
195           src/library/MSA2SequenceWorker.cpp \
196           src/library/MultiplexerWorker.cpp \
197           src/library/PassFilterWorker.cpp \
198           src/library/ReadAnnotationsWorker.cpp \
199           src/library/ReadAssemblyWorker.cpp \
200           src/library/ReadVariationWorker.cpp \
201           src/library/RemoteDBFetcherWorker.cpp \
202           src/library/RenameChromosomeInVariationWorker.cpp \
203           src/library/ReverseComplementWorker.cpp \
204           src/library/RmdupBamWorker.cpp \
205           src/library/SchemaWorker.cpp \
206           src/library/ScriptWorker.cpp \
207           src/library/SequenceQualityTrimWorker.cpp \
208           src/library/SequenceSplitWorker.cpp \
209           src/library/SequencesToMSAWorker.cpp \
210           src/library/StatisticWorkers.cpp \
211           src/library/SortBamWorker.cpp \
212           src/library/Text2SequenceWorker.cpp \
213           src/library/WriteAnnotationsWorker.cpp \
214           src/library/WriteAssemblyWorkers.cpp \
215           src/library/WriteVariationWorker.cpp \
216           src/library/create_cmdline_based_worker/CreateCmdlineBasedWorkerWizard.cpp \
217           src/tasks/ReadAssemblyTask.cpp \
218           src/tasks/RenameChromosomeInVariationTask.cpp \
219           src/tasks/SequenceQualityTrimTask.cpp \
220           src/util/CustomWorkerUtils.cpp \
221           src/util/DatasetsCountValidator.cpp \
222           src/util/DatasetValidator.cpp \
223           src/util/GrouperActionUtils.cpp \
224           src/util/RequiredSlotsValidator.cpp \
225           src/util/SaveSchemaImageUtils.cpp \
226           src/util/WorkerNameValidator.cpp \
227           src/util/WriteAnnotationsValidator.cpp \
228           src/util/WriteSequenceValidator.cpp
229
230RESOURCES += workflow_designer.qrc
231TRANSLATIONS += transl/russian.ts
232