/dports/biology/seqan1/seqan-1.3.1/seqan/chaining/ |
H A D | chain_base.h | 195 case 2: if( scoreMismatch( score_ ) == 0 && scoreGap( score_ ) == 0 ) 199 else if( scoreMismatch( score_ ) > 0 && scoreGap( score_ ) > 0 ) 201 if( scoreMismatch( score_ ) == scoreGap( score_ ) ) 210 else if( scoreMismatch( score_ ) > 0 && scoreGap( score_ ) > 0 ) 212 if( scoreMismatch( score_ ) == scoreGap( score_ ) ) 221 else if( scoreMismatch( score_ ) > 0 && scoreGap( score_ ) > 0 ) 223 if( scoreMismatch( score_ ) == scoreGap( score_ ) ) 232 else if( scoreMismatch( score_ ) > 0 && scoreGap( score_ ) > 0 ) 234 if( scoreMismatch( score_ ) == scoreGap( score_ ) ) 243 else if( scoreMismatch( score_ ) > 0 && scoreGap( score_ ) > 0 ) [all …]
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/dports/www/chromium-legacy/chromium-88.0.4324.182/chrome/browser/engagement/ |
H A D | site_engagement_score_unittest.cc | 109 SiteEngagementScore score_; member in SiteEngagementScoreTest 189 score_.GetTotalScore()); in TEST_F() 224 score_.GetTotalScore()); in TEST_F() 395 score_.AddPoints(5); in TEST_F() 406 score_.AddPoints(5); in TEST_F() 409 score_.Reset(10.0, now); in TEST_F() 421 score_.Reset(15.0, now); in TEST_F() 439 score_.AddPoints(2.0); in TEST_F() 445 score_.AddPoints(15.0); in TEST_F() 451 score_.AddPoints(4.0); in TEST_F() [all …]
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/dports/biology/diamond/diamond-2.0.13/src/lib/alp/ |
H A D | njn_localmaxstatutil.cpp | 111 *score_ = new long int [*dim_]; in flatten() 117 (*score_) [*dim_] = s; in flatten() 177 n_score = score_; in n_setParameters() 179 n_morgue = score_ [0] - 1; in n_setParameters() 232 const long int *score_, // values in lambda() argument 270 const long int *score_, // values in thetaMin() argument 287 const long int *score_, // values in rMin() argument 316 const long int *score_) // scores in delta() argument 330 const long int *score_) // scores in thetaMinusDelta() argument 515 if (score_ [i] <= score_ [i - 1]) return false; in isScoreIncreasing() [all …]
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H A D | njn_localmaxstatutil.hpp | 65 const long int *score_, // scores in increasing order 70 const long int *score_, // scores in increasing order 76 const long int *score_, // scores in increasing order 82 const long int *score_, // scores in increasing order 89 const long int *score_, // scores in increasing order 96 const long int *score_, // scores in increasing order 104 const long int *score_, // scores in increasing order 111 const long int *score_); // scores 116 const long int *score_); // scores 120 const long int *score_, // values [all …]
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H A D | sls_alignment_evaluer.hpp | 117 void calc(double score_,//pairwise alignment score 129 void calc(double score_,//pairwise alignment score 135 double evalue(double score_,//pairwise alignment score in evalue() argument 139 return area(score_, seqlen1_, seqlen2_) * evaluePerArea(score_); in evalue() 150 double area(double score_,//pairwise alignment score 154 double evaluePerArea(double score_) const in evaluePerArea() 156 return d_params.K*exp(-d_params.lambda*score_); in evaluePerArea() 159 double bitScore(double score_) const in bitScore() 161 return (d_params.lambda*score_-log(d_params.K))/log(2.0); in bitScore()
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/dports/biology/mmseqs2/MMseqs2-13-45111/lib/alp/ |
H A D | njn_localmaxstatutil.cpp | 111 *score_ = new long int [*dim_]; in flatten() 117 (*score_) [*dim_] = s; in flatten() 177 n_score = score_; in n_setParameters() 179 n_morgue = score_ [0] - 1; in n_setParameters() 232 const long int *score_, // values in lambda() argument 270 const long int *score_, // values in thetaMin() argument 287 const long int *score_, // values in rMin() argument 316 const long int *score_) // scores in delta() argument 330 const long int *score_) // scores in thetaMinusDelta() argument 515 if (score_ [i] <= score_ [i - 1]) return false; in isScoreIncreasing() [all …]
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H A D | njn_localmaxstatutil.hpp | 65 const long int *score_, // scores in increasing order 70 const long int *score_, // scores in increasing order 76 const long int *score_, // scores in increasing order 82 const long int *score_, // scores in increasing order 89 const long int *score_, // scores in increasing order 96 const long int *score_, // scores in increasing order 104 const long int *score_, // scores in increasing order 111 const long int *score_); // scores 116 const long int *score_); // scores 120 const long int *score_, // values [all …]
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H A D | sls_alignment_evaluer.hpp | 117 void calc(double score_,//pairwise alignment score 129 void calc(double score_,//pairwise alignment score 135 double evalue(double score_,//pairwise alignment score in evalue() argument 139 return area(score_, seqlen1_, seqlen2_) * evaluePerArea(score_); in evalue() 150 double area(double score_,//pairwise alignment score 154 double evaluePerArea(double score_) const in evaluePerArea() 156 return d_params.K*exp(-d_params.lambda*score_); in evaluePerArea() 159 double bitScore(double score_, double logK) const in bitScore() argument 161 return (d_params.lambda*score_-logK)/log(2.0); in bitScore() 164 double bitScore(double score_) const in bitScore() [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/gumbel_params/ |
H A D | njn_localmaxstatutil.cpp | 124 *score_ = new Int4 [*dim_]; in flatten() 130 (*score_) [*dim_] = s; in flatten() 187 n_score = score_; in n_setParameters() 245 const Int4 *score_, // values in lambda() argument 283 const Int4 *score_, // values in thetaMin() argument 300 const Int4 *score_, // values in rMin() argument 332 const Int4 *score_) // scores in delta() argument 346 const Int4 *score_) // scores in thetaMinusDelta() argument 368 const Int4 *score_, // values in descendingLadderEpochRepeat() argument 537 if (score_ [i] <= score_ [i - 1]) return false; in isScoreIncreasing() [all …]
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H A D | njn_localmaxstatutil.hpp | 72 const Int4 *score_, // scores in increasing order 77 const Int4 *score_, // scores in increasing order 83 const Int4 *score_, // scores in increasing order 89 const Int4 *score_, // scores in increasing order 96 const Int4 *score_, // scores in increasing order 103 const Int4 *score_, // scores in increasing order 111 const Int4 *score_, // scores in increasing order 118 const Int4 *score_); // scores 123 const Int4 *score_); // scores 127 const Int4 *score_, // values [all …]
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/dports/biology/diamond/diamond-2.0.13/src/dp/swipe/ |
H A D | banded_matrix.h | 76 score_.resize(band); in Matrix() 78 std::fill(score_.begin(), score_.end(), _sv()); in Matrix() 89 return score_[i]; 156 score_(score), in TracebackIterator() 164 return *score_; in score() 221 score_ = h; in walk_hgap() 227 score_ = v; in walk_vgap() 232 const Score *score_; member 253 std::fill(score_.begin(), score_.begin() + band, _sv()); in TracebackMatrix() 378 score_.resize(band); in TracebackVectorMatrix() [all …]
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H A D | full_matrix.h | 62 score_.resize(rows + 1); in Matrix() 65 std::fill(score_.begin(), score_.end(), z); in Matrix() 77 score_[i] = set_channel(score_[i], c, z); in set_zero() 79 score_[l] = set_channel(score_[l], c, z); in set_zero() 85 return score_[i + 1]; 89 MemBuffer<_sv> hgap_, score_; 214 score_.resize(rows + 1); in TracebackVectorMatrix() 217 std::fill(score_.begin(), score_.end(), _sv()); in TracebackVectorMatrix() 230 score_[i] = set_channel(score_[i], c, ::DISPATCH_ARCH::ScoreTraits<_sv>::zero_score()); in set_zero() 232 score_[l] = set_channel(score_[l], c, ::DISPATCH_ARCH::ScoreTraits<_sv>::zero_score()); in set_zero() [all …]
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/dports/math/clingo/clingo-5.5.1/clasp/clasp-da10954/src/ |
H A D | heuristics.cpp | 395 if ((v + n) > score_.size()) { n = score_.size() - v; } in updateVar() 417 LessLevel comp(s, score_); in newConstraint() 494 if (score_[first->var()].activity(decay_) > score_[best.var()].activity(decay_)) { in selectRange() 512 : vars_(CmpScore(score_)) in ClaspVsids_t() 559 score_[v].set(n); in updateVarActivity() 570 growVecTo(score_, v+n); in updateVar() 585 score_[v].set(-ms); in initScores() 593 score_[v].set(d); in initScores() 617 score_[i].set(d); in normalize() 742 score_[v] = DomScore(score_[v].value); in initScores() [all …]
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/dports/math/clasp/clasp-3.3.5/src/ |
H A D | heuristics.cpp | 395 if ((v + n) > score_.size()) { n = score_.size() - v; } in updateVar() 417 LessLevel comp(s, score_); in newConstraint() 494 if (score_[first->var()].activity(decay_) > score_[best.var()].activity(decay_)) { in selectRange() 512 : vars_(CmpScore(score_)) in ClaspVsids_t() 559 score_[v].set(n); in updateVarActivity() 570 growVecTo(score_, v+n); in updateVar() 585 score_[v].set(-ms); in initScores() 593 score_[v].set(d); in initScores() 617 score_[i].set(d); in normalize() 742 score_[v] = DomScore(score_[v].value); in initScores() [all …]
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/dports/math/clingo/clingo-5.5.1/clasp/src/ |
H A D | heuristics.cpp | 395 if ((v + n) > score_.size()) { n = score_.size() - v; } in updateVar() 417 LessLevel comp(s, score_); in newConstraint() 494 if (score_[first->var()].activity(decay_) > score_[best.var()].activity(decay_)) { in selectRange() 512 : vars_(CmpScore(score_)) in ClaspVsids_t() 559 score_[v].set(n); in updateVarActivity() 570 growVecTo(score_, v+n); in updateVar() 585 score_[v].set(-ms); in initScores() 593 score_[v].set(d); in initScores() 617 score_[i].set(d); in normalize() 742 score_[v] = DomScore(score_[v].value); in initScores() [all …]
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/dports/chinese/libime/libime-1.0.9/src/libime/core/ |
H A D | lattice.h | 32 : sentence_(std::move(sentence)), score_(score) {} in sentence_() 38 float score() const { return score_; } in score() 39 void adjustScore(float adjust) { score_ += adjust; } in adjustScore() 40 void setScore(float score) { score_ = score; } in setScore() 43 return score_ < rhs.score_; 47 return score_ > rhs.score_; 54 float score_; variable 91 float score() const { return score_; } in score() 92 void setScore(float score) { score_ = score; } in setScore() 143 float score_ = 0.0f; variable
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/dports/audio/musescore/MuseScore-3.6.1/importexport/ove/ |
H A D | importove.cpp | 219 Score* score_; member in OveToMScore 237 score_ = score; in convert() 249 Part* part = score_->parts().at(i); in convert() 283 Part* part = new Part(score_); in createStructure() 294 score_->appendPart(part); in createStructure() 303 score_->measures()->add(measure); in createStructure() 372 score_->measures()->add(vbox); in convertHeader() 1437 cr = new Rest(score_); in convertNotes() 1454 cr = new Rest(score_); in convertNotes() 2207 score_->addSpanner(slur); in convertSlurs() [all …]
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/dports/www/chromium-legacy/chromium-88.0.4324.182/chrome/browser/media/ |
H A D | media_engagement_score_unittest.cc | 55 delete score_; in TearDown() 62 MediaEngagementScore* score_; member in MediaEngagementScoreTest 150 score_->Recalculate(); in OverrideFieldTrial() 159 VerifyGetScoreDetails(score_); in TEST_F() 160 UpdateScore(score_); in TEST_F() 161 VerifyGetScoreDetails(score_); in TEST_F() 296 UpdateScore(score_); in TEST_F() 304 UpdateScore(score_); in TEST_F() 409 EXPECT_TRUE(score_->high_score()); in TEST_F() 413 EXPECT_TRUE(score_->high_score()); in TEST_F() [all …]
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/dports/lang/spidermonkey78/firefox-78.9.0/browser/components/translation/cld2/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 double tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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/dports/www/firefox/firefox-99.0/browser/components/translation/cld2/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 double tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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/dports/www/firefox-esr/firefox-91.8.0/browser/components/translation/cld2/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 double tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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/dports/mail/thunderbird/thunderbird-91.8.0/browser/components/translation/cld2/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 double tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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/dports/lang/spidermonkey60/firefox-60.9.0/browser/components/translation/cld2/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 double tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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/dports/devel/cld2/cld-20150505/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 int tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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/dports/www/firefox-legacy/firefox-52.8.0esr/browser/components/translation/cld2/internal/ |
H A D | tote.cc | 60 score_[ikey] += idelta; in Add() 76 int insert_me = score_[base + i]; in CurrentTopThreeKeys() 135 score_[sub0] += score; in Add() 143 score_[sub1] += score; in Add() 151 score_[sub2] += score; in Add() 172 score_[alloc] = score; in Add() 239 double tmps = score_[sub]; in Sort() 240 score_[sub] = score_[sub2]; in Sort() 241 score_[sub2] = tmps; in Sort() 258 value_[sub], score_[sub], reliability_[sub]); in Dump()
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